RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 NRKQ7Z2Y5 1582 aa28.33■■■□□ 2.12
DDX39A-207ENST00000588542 PAK3O75914 559 aaPredicted RBP28.32■■■□□ 2.12
DDX39A-207ENST00000588542 SSH2Q76I76 1423 aa28.32■■■□□ 2.12
DDX39A-207ENST00000588542 BRD4O60885 1362 aaPredicted RBP28.3■■■□□ 2.12
DDX39A-207ENST00000588542 SLC12A5Q9H2X9 1139 aa28.3■■■□□ 2.12
DDX39A-207ENST00000588542 MEX3CQ5U5Q3 659 aaKnown RBP28.29■■■□□ 2.12
DDX39A-207ENST00000588542 TMC1Q8TDI8 760 aa28.28■■■□□ 2.12
DDX39A-207ENST00000588542 CABLES1Q8TDN4 633 aa28.28■■■□□ 2.12
DDX39A-207ENST00000588542 ZNF692Q9BU19 519 aaPredicted RBP28.28■■■□□ 2.12
DDX39A-207ENST00000588542 PHF23Q9BUL5 403 aaPredicted RBP28.28■■■□□ 2.12
DDX39A-207ENST00000588542 RGS17Q9UGC6 210 aaPredicted RBP28.28■■■□□ 2.12
DDX39A-207ENST00000588542 MYOM1P52179 1685 aa28.28■■■□□ 2.12
DDX39A-207ENST00000588542 ADAMTS2O95450 1211 aa28.27■■■□□ 2.12
DDX39A-207ENST00000588542 PIK3C2AO00443 1686 aa28.26■■■□□ 2.12
DDX39A-207ENST00000588542 PHRF1Q9P1Y6 1649 aaKnown RBP28.26■■■□□ 2.11
DDX39A-207ENST00000588542 KTN1Q86UP2 1357 aaKnown RBP28.25■■■□□ 2.11
DDX39A-207ENST00000588542 NINLQ9Y2I6 1382 aa28.25■■■□□ 2.11
DDX39A-207ENST00000588542 CDCA8Q53HL2 280 aa28.24■■■□□ 2.11
DDX39A-207ENST00000588542 PLEKHG5O94827 1062 aa28.23■■■□□ 2.11
DDX39A-207ENST00000588542 A0A1W2PP64 1363 aa28.23■■■□□ 2.11
DDX39A-207ENST00000588542 ABTB2Q8N961 1025 aa28.22■■■□□ 2.11
DDX39A-207ENST00000588542 TTC21BQ7Z4L5 1316 aa28.21■■■□□ 2.11
DDX39A-207ENST00000588542 NUTM2GQ5VZR2 741 aa28.21■■■□□ 2.11
DDX39A-207ENST00000588542 C8orf37Q96NL8 207 aa28.21■■■□□ 2.11
DDX39A-207ENST00000588542 HDGFL2Q7Z4V5 671 aaPredicted RBP28.2■■■□□ 2.1
DDX39A-207ENST00000588542 TERF2IPQ9NYB0 399 aa28.19■■■□□ 2.1
DDX39A-207ENST00000588542 AFF2P51816 1311 aa28.18■■■□□ 2.1
DDX39A-207ENST00000588542 HAP1P54257 671 aaPredicted RBP28.17■■■□□ 2.1
DDX39A-207ENST00000588542 EDC4Q6P2E9 1401 aaKnown RBP28.17■■■□□ 2.1
DDX39A-207ENST00000588542 USP19O94966 1318 aa28.17■■■□□ 2.1
DDX39A-207ENST00000588542 TTC21AQ8NDW8 1320 aa28.17■■■□□ 2.1
DDX39A-207ENST00000588542 ANKRD36BQ8N2N9 1353 aa28.16■■■□□ 2.1
DDX39A-207ENST00000588542 C11orf95C9JLR9 678 aaPredicted RBP28.16■■■□□ 2.1
DDX39A-207ENST00000588542 NGLY1Q96IV0 654 aa28.16■■■□□ 2.1
DDX39A-207ENST00000588542 PLCH1Q4KWH8 1693 aa28.16■■■□□ 2.1
DDX39A-207ENST00000588542 USP54Q70EL1 1684 aa28.16■■■□□ 2.1
DDX39A-207ENST00000588542 POTEAQ6S8J7 498 aa28.14■■■□□ 2.1
DDX39A-207ENST00000588542 NLRP13Q86W25 1043 aa28.14■■■□□ 2.1
DDX39A-207ENST00000588542 SLIT3O75094 1523 aa28.13■■■□□ 2.09
DDX39A-207ENST00000588542 FNBP4Q8N3X1 1017 aaPredicted RBP28.13■■■□□ 2.09
DDX39A-207ENST00000588542 NLRP6P59044 892 aa28.12■■■□□ 2.09
DDX39A-207ENST00000588542 NWD2Q9ULI1 1742 aa28.12■■■□□ 2.09
DDX39A-207ENST00000588542 ZNF772Q68DY9 489 aaPredicted RBP28.11■■■□□ 2.09
DDX39A-207ENST00000588542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.11■■■□□ 2.09
DDX39A-207ENST00000588542 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.11■■■□□ 2.09
DDX39A-207ENST00000588542 SLIT2O94813 1529 aa28.11■■■□□ 2.09
DDX39A-207ENST00000588542 COL14A1Q05707 1796 aaKnown RBP28.11■■■□□ 2.09
DDX39A-207ENST00000588542 ILDR2Q71H61 639 aa28.09■■■□□ 2.09
DDX39A-207ENST00000588542 BCL9LQ86UU0 1499 aa28.08■■■□□ 2.09
DDX39A-207ENST00000588542 FAM83GA6ND36 823 aa28.08■■■□□ 2.09
DDX39A-207ENST00000588542 POLR3GLQ9BT43 218 aa28.08■■■□□ 2.09
DDX39A-207ENST00000588542 ZRANB1Q9UGI0 708 aa28.08■■■□□ 2.09
DDX39A-207ENST00000588542 USP31Q70CQ4 1352 aa28.08■■■□□ 2.09
DDX39A-207ENST00000588542 GCP02774 474 aa28.07■■■□□ 2.08
DDX39A-207ENST00000588542 NME9Q86XW9 330 aa28.07■■■□□ 2.08
DDX39A-207ENST00000588542 NRAPQ86VF7 1730 aa28.06■■■□□ 2.08
DDX39A-207ENST00000588542 USP21Q9UK80 565 aa28.06■■■□□ 2.08
DDX39A-207ENST00000588542 KIAA0232Q92628 1395 aa28.06■■■□□ 2.08
DDX39A-207ENST00000588542 ZC3H6P61129 1189 aaKnown RBP28.05■■■□□ 2.08
DDX39A-207ENST00000588542 KIF20BQ96Q89 1820 aa28.05■■■□□ 2.08
DDX39A-207ENST00000588542 CARD14Q9BXL6 1004 aa28.04■■■□□ 2.08
DDX39A-207ENST00000588542 KIF7Q2M1P5 1343 aa28.03■■■□□ 2.08
DDX39A-207ENST00000588542 OVOS2A0A0J9YW53 1432 aa28.02■■■□□ 2.08
DDX39A-207ENST00000588542 OVOS2Q6IE36 1432 aa28.02■■■□□ 2.08
DDX39A-207ENST00000588542 CPDO75976 1380 aa28.02■■■□□ 2.08
DDX39A-207ENST00000588542 NFAT5O94916 1531 aa28.02■■■□□ 2.08
DDX39A-207ENST00000588542 ATRNO75882 1429 aa28.01■■■□□ 2.08
DDX39A-207ENST00000588542 LMO7Q8WWI1 1683 aa28.01■■■□□ 2.07
DDX39A-207ENST00000588542 QTRT2Q9H974 415 aaKnown RBP28.01■■■□□ 2.07
DDX39A-207ENST00000588542 PRDM11Q9NQV5 511 aa28.01■■■□□ 2.07
DDX39A-207ENST00000588542 COL18A1P39060 1754 aa27.99■■■□□ 2.07
DDX39A-207ENST00000588542 CHRNA2Q15822 529 aa27.99■■■□□ 2.07
DDX39A-207ENST00000588542 UNC5CLQ8IV45 518 aa27.99■■■□□ 2.07
DDX39A-207ENST00000588542 NSD3Q9BZ95 1437 aa27.99■■■□□ 2.07
DDX39A-207ENST00000588542 BTG4Q9NY30 223 aa27.97■■■□□ 2.07
DDX39A-207ENST00000588542 TRPC5Q9UL62 973 aaPredicted RBP27.97■■■□□ 2.07
DDX39A-207ENST00000588542 LTN1O94822 1766 aa27.96■■■□□ 2.07
DDX39A-207ENST00000588542 FYB1O15117 783 aa27.96■■■□□ 2.07
DDX39A-207ENST00000588542 KCNH5Q8NCM2 988 aa27.96■■■□□ 2.07
DDX39A-207ENST00000588542 RGPD5Q99666 1765 aa27.96■■■□□ 2.07
DDX39A-207ENST00000588542 CAMTA1Q9Y6Y1 1673 aa27.95■■■□□ 2.07
DDX39A-207ENST00000588542 CCDC7Q96M83 1385 aa27.95■■■□□ 2.06
DDX39A-207ENST00000588542 PANK3Q9H999 370 aa27.94■■■□□ 2.06
DDX39A-207ENST00000588542 WASHC2AQ641Q2 1341 aa27.93■■■□□ 2.06
DDX39A-207ENST00000588542 SOX12O15370 315 aa27.93■■■□□ 2.06
DDX39A-207ENST00000588542 RXRBP28702 533 aa27.93■■■□□ 2.06
DDX39A-207ENST00000588542 GLI3P10071 1580 aa27.93■■■□□ 2.06
DDX39A-207ENST00000588542 ZEB1P37275 1124 aaPredicted RBP27.92■■■□□ 2.06
DDX39A-207ENST00000588542 RBM6P78332 1123 aaKnown RBP27.92■■■□□ 2.06
DDX39A-207ENST00000588542 ARHGEF25Q86VW2 580 aa27.92■■■□□ 2.06
DDX39A-207ENST00000588542 COG3Q96JB2 828 aa27.91■■■□□ 2.06
DDX39A-207ENST00000588542 GGNBP2Q9H3C7 697 aa27.91■■■□□ 2.06
DDX39A-207ENST00000588542 ANKRD26Q9UPS8 1709 aa27.9■■■□□ 2.06
DDX39A-207ENST00000588542 AATKQ6ZMQ8 1374 aa27.9■■■□□ 2.06
DDX39A-207ENST00000588542 VPS72Q15906 364 aa27.9■■■□□ 2.06
DDX39A-207ENST00000588542 CDK12Q9NYV4 1490 aaPredicted RBP27.89■■■□□ 2.05
DDX39A-207ENST00000588542 ZBTB7CA1YPR0 619 aa27.88■■■□□ 2.05
DDX39A-207ENST00000588542 GJD4Q96KN9 370 aaPredicted RBP27.88■■■□□ 2.05
DDX39A-207ENST00000588542 ABCC6O95255 1503 aa27.87■■■□□ 2.05
DDX39A-207ENST00000588542 COL5A2P05997 1499 aaPredicted RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms