RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 C8orf37Q96NL8 207 aa18.28■□□□□ 0.52
NEDD4L-223ENST00000588516 NSD2O96028 1365 aa18.27■□□□□ 0.52
NEDD4L-223ENST00000588516 CRBNQ96SW2 442 aa18.27■□□□□ 0.52
NEDD4L-223ENST00000588516 C19orf44Q9H6X5 657 aa18.27■□□□□ 0.52
NEDD4L-223ENST00000588516 PDE4AP27815 886 aa18.26■□□□□ 0.51
NEDD4L-223ENST00000588516 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
NEDD4L-223ENST00000588516 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
NEDD4L-223ENST00000588516 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
NEDD4L-223ENST00000588516 CFAP53Q96M91 514 aa18.25■□□□□ 0.51
NEDD4L-223ENST00000588516 BACH2Q9BYV9 841 aa18.25■□□□□ 0.51
NEDD4L-223ENST00000588516 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
NEDD4L-223ENST00000588516 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
NEDD4L-223ENST00000588516 CHGAP10645 457 aaKnown RBP18.24■□□□□ 0.51
NEDD4L-223ENST00000588516 BRINP3Q76B58 766 aa18.24■□□□□ 0.51
NEDD4L-223ENST00000588516 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
NEDD4L-223ENST00000588516 ATAD2Q6PL18 1390 aa18.24■□□□□ 0.51
NEDD4L-223ENST00000588516 ZFYVE9O95405 1425 aa18.24■□□□□ 0.51
NEDD4L-223ENST00000588516 MORC1Q86VD1 984 aa18.23■□□□□ 0.51
NEDD4L-223ENST00000588516 NGLY1Q96IV0 654 aa18.23■□□□□ 0.51
NEDD4L-223ENST00000588516 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
NEDD4L-223ENST00000588516 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
NEDD4L-223ENST00000588516 PLEKHG1Q9ULL1 1385 aa18.23■□□□□ 0.51
NEDD4L-223ENST00000588516 SLC52A1Q9NWF4 448 aa18.23■□□□□ 0.51
NEDD4L-223ENST00000588516 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
NEDD4L-223ENST00000588516 ADGRB1O14514 1584 aa18.21■□□□□ 0.51
NEDD4L-223ENST00000588516 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
NEDD4L-223ENST00000588516 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
NEDD4L-223ENST00000588516 PDE3AQ14432 1141 aa18.2■□□□□ 0.5
NEDD4L-223ENST00000588516 RTL5Q5HYW3 569 aaPredicted RBP18.2■□□□□ 0.5
NEDD4L-223ENST00000588516 LRRC59Q96AG4 307 aaKnown RBP18.2■□□□□ 0.5
NEDD4L-223ENST00000588516 CARD14Q9BXL6 1004 aa18.2■□□□□ 0.5
NEDD4L-223ENST00000588516 APAF1O14727 1248 aa18.19■□□□□ 0.5
NEDD4L-223ENST00000588516 PLIN1O60240 522 aa18.19■□□□□ 0.5
NEDD4L-223ENST00000588516 RUNDC1Q96C34 613 aa18.19■□□□□ 0.5
NEDD4L-223ENST00000588516 NSD3Q9BZ95 1437 aa18.18■□□□□ 0.5
NEDD4L-223ENST00000588516 RIMS2Q9UQ26 1411 aa18.18■□□□□ 0.5
NEDD4L-223ENST00000588516 WDR63Q8IWG1 891 aa18.18■□□□□ 0.5
NEDD4L-223ENST00000588516 KDM2BQ8NHM5 1336 aa18.18■□□□□ 0.5
NEDD4L-223ENST00000588516 ADAMTS2O95450 1211 aa18.17■□□□□ 0.5
NEDD4L-223ENST00000588516 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
NEDD4L-223ENST00000588516 CCDC27Q2M243 656 aa18.16■□□□□ 0.5
NEDD4L-223ENST00000588516 USP35Q9P2H5 1018 aa18.16■□□□□ 0.5
NEDD4L-223ENST00000588516 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
NEDD4L-223ENST00000588516 ANKRD36BQ8N2N9 1353 aa18.15■□□□□ 0.5
NEDD4L-223ENST00000588516 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
NEDD4L-223ENST00000588516 AMOTL2Q9Y2J4 779 aa18.14■□□□□ 0.49
NEDD4L-223ENST00000588516 NEXMIFQ5QGS0 1516 aa18.13■□□□□ 0.49
NEDD4L-223ENST00000588516 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
NEDD4L-223ENST00000588516 USP21Q9UK80 565 aa18.13■□□□□ 0.49
NEDD4L-223ENST00000588516 ARHGEF28Q8N1W1 1705 aaKnown RBP18.12■□□□□ 0.49
NEDD4L-223ENST00000588516 CT47B1P0C2W7 299 aaPredicted RBP18.12■□□□□ 0.49
NEDD4L-223ENST00000588516 FAM161AQ3B820 660 aa18.12■□□□□ 0.49
NEDD4L-223ENST00000588516 DDX17Q92841 729 aaKnown RBP18.12■□□□□ 0.49
NEDD4L-223ENST00000588516 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
NEDD4L-223ENST00000588516 TRPC5Q9UL62 973 aaPredicted RBP18.12■□□□□ 0.49
NEDD4L-223ENST00000588516 PNPLA6Q8IY17 1366 aa18.11■□□□□ 0.49
NEDD4L-223ENST00000588516 CCDC125Q86Z20 511 aa18.11■□□□□ 0.49
NEDD4L-223ENST00000588516 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
NEDD4L-223ENST00000588516 DAXXQ9UER7 740 aaPredicted RBP18.11■□□□□ 0.49
NEDD4L-223ENST00000588516 PIK3R4Q99570 1358 aa18.1■□□□□ 0.49
NEDD4L-223ENST00000588516 ADRA2BP18089 450 aa18.1■□□□□ 0.49
NEDD4L-223ENST00000588516 CANXP27824 592 aaKnown RBP18.1■□□□□ 0.49
NEDD4L-223ENST00000588516 MYH16Q9H6N6 1097 aa18.1■□□□□ 0.49
NEDD4L-223ENST00000588516 ADAMTS13Q76LX8 1427 aa18.1■□□□□ 0.49
NEDD4L-223ENST00000588516 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.49
NEDD4L-223ENST00000588516 C20orf194Q5TEA3 1177 aa18.08■□□□□ 0.49
NEDD4L-223ENST00000588516 SLC12A5Q9H2X9 1139 aa18.08■□□□□ 0.49
NEDD4L-223ENST00000588516 MYO5BQ9ULV0 1848 aa18.08■□□□□ 0.48
NEDD4L-223ENST00000588516 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
NEDD4L-223ENST00000588516 DCCP43146 1447 aa18.07■□□□□ 0.48
NEDD4L-223ENST00000588516 NPM2Q86SE8 214 aaKnown RBP18.07■□□□□ 0.48
NEDD4L-223ENST00000588516 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
NEDD4L-223ENST00000588516 TERF2IPQ9NYB0 399 aa18.07■□□□□ 0.48
NEDD4L-223ENST00000588516 MST1RQ04912 1400 aa18.06■□□□□ 0.48
NEDD4L-223ENST00000588516 NHSL1Q5SYE7 1610 aa18.04■□□□□ 0.48
NEDD4L-223ENST00000588516 PTPRUQ92729 1446 aa18.04■□□□□ 0.48
NEDD4L-223ENST00000588516 TULP4Q9NRJ4 1543 aa18.04■□□□□ 0.48
NEDD4L-223ENST00000588516 MTHFSP49914 203 aa18.03■□□□□ 0.48
NEDD4L-223ENST00000588516 TMEM132EQ6IEE7 984 aa18.03■□□□□ 0.48
NEDD4L-223ENST00000588516 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
NEDD4L-223ENST00000588516 TMEM131LA2VDJ0 1609 aa18.03■□□□□ 0.48
NEDD4L-223ENST00000588516 ABCC11Q96J66 1382 aa18.02■□□□□ 0.48
NEDD4L-223ENST00000588516 ANKRD26Q9UPS8 1709 aa18.02■□□□□ 0.48
NEDD4L-223ENST00000588516 DEKP35659 375 aaKnown RBP18.01■□□□□ 0.47
NEDD4L-223ENST00000588516 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
NEDD4L-223ENST00000588516 HDGFL2Q7Z4V5 671 aaPredicted RBP18■□□□□ 0.47
NEDD4L-223ENST00000588516 FNBP4Q8N3X1 1017 aaPredicted RBP18■□□□□ 0.47
NEDD4L-223ENST00000588516 IL16Q14005 1332 aa18■□□□□ 0.47
NEDD4L-223ENST00000588516 BCAR3O75815 825 aa17.99■□□□□ 0.47
NEDD4L-223ENST00000588516 ATRNO75882 1429 aa17.99■□□□□ 0.47
NEDD4L-223ENST00000588516 ADGRB2O60241 1585 aa17.99■□□□□ 0.47
NEDD4L-223ENST00000588516 NBR1Q14596 966 aa17.98■□□□□ 0.47
NEDD4L-223ENST00000588516 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
NEDD4L-223ENST00000588516 POGKQ9P215 609 aa17.98■□□□□ 0.47
NEDD4L-223ENST00000588516 RARSP54136 660 aaKnown RBP17.98■□□□□ 0.47
NEDD4L-223ENST00000588516 SRPK2P78362 688 aaKnown RBP17.98■□□□□ 0.47
NEDD4L-223ENST00000588516 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
NEDD4L-223ENST00000588516 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
NEDD4L-223ENST00000588516 U2AF1L5P0DN76 240 aaPredicted RBP17.97■□□□□ 0.47
NEDD4L-223ENST00000588516 U2AF1Q01081 240 aaKnown RBP eCLIP17.97■□□□□ 0.471e-7■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms