RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 KRT28Q7Z3Y7 464 aa11.28□□□□□ -0.6
TPM4-210ENST00000588507 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
TPM4-210ENST00000588507 KIF15Q9NS87 1388 aa11.28□□□□□ -0.6
TPM4-210ENST00000588507 YBX3P16989 372 aaKnown RBP eCLIP11.27□□□□□ -0.61
TPM4-210ENST00000588507 HTRA3P83110 453 aa11.27□□□□□ -0.61
TPM4-210ENST00000588507 SLC15A2Q16348 729 aa11.27□□□□□ -0.61
TPM4-210ENST00000588507 NRXN3Q9Y4C0 1643 aa11.26□□□□□ -0.61
TPM4-210ENST00000588507 SPATA31A1Q5TZJ5 1347 aa11.26□□□□□ -0.61
TPM4-210ENST00000588507 CCDC144AA2RUR9 1427 aa11.26□□□□□ -0.61
TPM4-210ENST00000588507 C11orf95C9JLR9 678 aaPredicted RBP11.25□□□□□ -0.61
TPM4-210ENST00000588507 MLLT1Q03111 559 aaPredicted RBP11.25□□□□□ -0.61
TPM4-210ENST00000588507 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
TPM4-210ENST00000588507 RRBP1Q9P2E9 1410 aaKnown RBP11.25□□□□□ -0.61
TPM4-210ENST00000588507 RGPD3A6NKT7 1758 aaPredicted RBP11.24□□□□□ -0.61
TPM4-210ENST00000588507 RGPD4Q7Z3J3 1758 aa11.24□□□□□ -0.61
TPM4-210ENST00000588507 PSME1Q06323 249 aa11.24□□□□□ -0.61
TPM4-210ENST00000588507 TNS3Q68CZ2 1445 aa11.24□□□□□ -0.61
TPM4-210ENST00000588507 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
TPM4-210ENST00000588507 PROM2Q8N271 834 aa11.23□□□□□ -0.61
TPM4-210ENST00000588507 NLGN2Q8NFZ4 835 aa11.23□□□□□ -0.61
TPM4-210ENST00000588507 ROBO2Q9HCK4 1378 aa11.23□□□□□ -0.61
TPM4-210ENST00000588507 COL14A1Q05707 1796 aaKnown RBP11.21□□□□□ -0.61
TPM4-210ENST00000588507 ARHGEF10O15013 1369 aa11.2□□□□□ -0.62
TPM4-210ENST00000588507 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
TPM4-210ENST00000588507 NUTM2FA1L443 756 aa11.2□□□□□ -0.62
TPM4-210ENST00000588507 POLD1P28340 1107 aa11.2□□□□□ -0.62
TPM4-210ENST00000588507 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
TPM4-210ENST00000588507 BARGINQ6ZT62 677 aa11.19□□□□□ -0.62
TPM4-210ENST00000588507 HFM1A2PYH4 1435 aa11.18□□□□□ -0.62
TPM4-210ENST00000588507 CDC42BPGQ6DT37 1551 aa11.18□□□□□ -0.62
TPM4-210ENST00000588507 USP19O94966 1318 aa11.17□□□□□ -0.62
TPM4-210ENST00000588507 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
TPM4-210ENST00000588507 RBM46Q8TBY0 533 aaKnown RBP11.17□□□□□ -0.62
TPM4-210ENST00000588507 USP35Q9P2H5 1018 aa11.17□□□□□ -0.62
TPM4-210ENST00000588507 SBNO1A3KN83 1393 aa11.16□□□□□ -0.62
TPM4-210ENST00000588507 PCNTO95613 3336 aa11.16□□□□□ -0.62
TPM4-210ENST00000588507 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
TPM4-210ENST00000588507 RGS19P49795 217 aa11.15□□□□□ -0.62
TPM4-210ENST00000588507 STRN4Q9NRL3 753 aa11.15□□□□□ -0.62
TPM4-210ENST00000588507 TECPR2O15040 1411 aa11.15□□□□□ -0.62
TPM4-210ENST00000588507 FSTL1Q12841 308 aa11.14□□□□□ -0.63
TPM4-210ENST00000588507 SLC16A10Q8TF71 515 aa11.14□□□□□ -0.63
TPM4-210ENST00000588507 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
TPM4-210ENST00000588507 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
TPM4-210ENST00000588507 KIAA1210Q9ULL0 1709 aa11.13□□□□□ -0.63
TPM4-210ENST00000588507 PMFBP1Q8TBY8 1022 aa11.13□□□□□ -0.63
TPM4-210ENST00000588507 OVOS2A0A0G2JMS6 1433 aa11.12□□□□□ -0.63
TPM4-210ENST00000588507 OVOS2A0A0J9YW53 1432 aa11.12□□□□□ -0.63
TPM4-210ENST00000588507 MYOM3Q5VTT5 1437 aa11.12□□□□□ -0.63
TPM4-210ENST00000588507 OVOS2Q6IE36 1432 aa11.12□□□□□ -0.63
TPM4-210ENST00000588507 PRAG1Q86YV5 1406 aa11.12□□□□□ -0.63
TPM4-210ENST00000588507 ZNF326Q5BKZ1 582 aaKnown RBP11.12□□□□□ -0.63
TPM4-210ENST00000588507 PTF1AQ7RTS3 328 aa11.12□□□□□ -0.63
TPM4-210ENST00000588507 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
TPM4-210ENST00000588507 PRDM10Q9NQV6 1147 aa11.12□□□□□ -0.63
TPM4-210ENST00000588507 NAIPQ13075 1403 aa11.11□□□□□ -0.63
TPM4-210ENST00000588507 IQGAP3Q86VI3 1631 aa11.11□□□□□ -0.63
TPM4-210ENST00000588507 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
TPM4-210ENST00000588507 ARHGEF28Q8N1W1 1705 aaKnown RBP11.11□□□□□ -0.63
TPM4-210ENST00000588507 TCP11L2Q8N4U5 519 aa11.1□□□□□ -0.63
TPM4-210ENST00000588507 PHF8Q9UPP1 1060 aa11.1□□□□□ -0.63
TPM4-210ENST00000588507 EVA1CP58658 441 aa11.09□□□□□ -0.63
TPM4-210ENST00000588507 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
TPM4-210ENST00000588507 SBF2Q86WG5 1849 aa11.08□□□□□ -0.64
TPM4-210ENST00000588507 NMRK2Q9NPI5 230 aa11.08□□□□□ -0.64
TPM4-210ENST00000588507 THRAP3Q9Y2W1 955 aaKnown RBP11.08□□□□□ -0.64
TPM4-210ENST00000588507 PEAK1Q9H792 1746 aa11.06□□□□□ -0.64
TPM4-210ENST00000588507 PDE4DIPQ5VU43 2346 aa11.06□□□□□ -0.64
TPM4-210ENST00000588507 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
TPM4-210ENST00000588507 CCDC85CA6NKD9 419 aa11.05□□□□□ -0.64
TPM4-210ENST00000588507 FOXN1O15353 648 aa11.05□□□□□ -0.64
TPM4-210ENST00000588507 ANKRD30AQ9BXX3 1397 aa11.04□□□□□ -0.64
TPM4-210ENST00000588507 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
TPM4-210ENST00000588507 SSH2Q76I76 1423 aa11.04□□□□□ -0.64
TPM4-210ENST00000588507 TOPAZ1Q8N9V7 1692 aa11.04□□□□□ -0.64
TPM4-210ENST00000588507 ZNF827Q17R98 1081 aa11.03□□□□□ -0.64
TPM4-210ENST00000588507 LARP1Q6PKG0 1096 aaKnown RBP11.03□□□□□ -0.64
TPM4-210ENST00000588507 ATP7BP35670 1465 aa11.03□□□□□ -0.64
TPM4-210ENST00000588507 NRXN1Q9ULB1 1477 aa11.03□□□□□ -0.64
TPM4-210ENST00000588507 PARP4Q9UKK3 1724 aaKnown RBP11.03□□□□□ -0.64
TPM4-210ENST00000588507 KIAA0232Q92628 1395 aa11.03□□□□□ -0.64
TPM4-210ENST00000588507 CTCFP49711 727 aaPredicted RBP11.02□□□□□ -0.65
TPM4-210ENST00000588507 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.65
TPM4-210ENST00000588507 FMN2Q9NZ56 1722 aa11.01□□□□□ -0.65
TPM4-210ENST00000588507 DDB1Q16531 1140 aa11.01□□□□□ -0.65
TPM4-210ENST00000588507 CHIC2Q9UKJ5 165 aa11.01□□□□□ -0.65
TPM4-210ENST00000588507 CD2APQ9Y5K6 639 aa11.01□□□□□ -0.65
TPM4-210ENST00000588507 SMC1BQ8NDV3 1235 aa11□□□□□ -0.65
TPM4-210ENST00000588507 BCL9O00512 1426 aa10.99□□□□□ -0.65
TPM4-210ENST00000588507 PAPPAQ13219 1627 aa10.98□□□□□ -0.65
TPM4-210ENST00000588507 E9PCH4 1651 aa10.98□□□□□ -0.65
TPM4-210ENST00000588507 VGFO15240 615 aaPredicted RBP10.98□□□□□ -0.65
TPM4-210ENST00000588507 ZC3H6P61129 1189 aaKnown RBP10.98□□□□□ -0.65
TPM4-210ENST00000588507 AKT1S1Q96B36 256 aa10.98□□□□□ -0.65
TPM4-210ENST00000588507 AIDAQ96BJ3 306 aa10.98□□□□□ -0.65
TPM4-210ENST00000588507 PNPLA7Q6ZV29 1317 aa10.98□□□□□ -0.65
TPM4-210ENST00000588507 MARCH10Q8NA82 808 aaPredicted RBP10.97□□□□□ -0.65
TPM4-210ENST00000588507 DAPK1P53355 1430 aa10.96□□□□□ -0.65
TPM4-210ENST00000588507 RGPD8O14715 1765 aaPredicted RBP10.95□□□□□ -0.66
TPM4-210ENST00000588507 ALS2Q96Q42 1657 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms