RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 RGPD1P0DJD0 1748 aa20.44■□□□□ 0.86
CLPTM1-208ENST00000588274 ITSN1Q15811 1721 aa20.44■□□□□ 0.86
CLPTM1-208ENST00000588274 WASLO00401 505 aaPredicted RBP20.43■□□□□ 0.86
CLPTM1-208ENST00000588274 BTG4Q9NY30 223 aa20.43■□□□□ 0.86
CLPTM1-208ENST00000588274 DISP2A7MBM2 1401 aa20.43■□□□□ 0.86
CLPTM1-208ENST00000588274 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
CLPTM1-208ENST00000588274 SPATA31A5Q5VU36 1347 aa20.42■□□□□ 0.86
CLPTM1-208ENST00000588274 SPATA31A7Q8IWB4 1347 aa20.42■□□□□ 0.86
CLPTM1-208ENST00000588274 GPRASP1Q5JY77 1395 aa20.42■□□□□ 0.86
CLPTM1-208ENST00000588274 CCDC9Q9Y3X0 531 aaKnown RBP20.41■□□□□ 0.86
CLPTM1-208ENST00000588274 NRKQ7Z2Y5 1582 aa20.38■□□□□ 0.85
CLPTM1-208ENST00000588274 SF3B2Q13435 895 aaKnown RBP20.38■□□□□ 0.85
CLPTM1-208ENST00000588274 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
CLPTM1-208ENST00000588274 POLR3AO14802 1390 aaPredicted RBP20.36■□□□□ 0.85
CLPTM1-208ENST00000588274 FAM182BQ5T319 152 aa20.36■□□□□ 0.85
CLPTM1-208ENST00000588274 LMO7Q8WWI1 1683 aa20.35■□□□□ 0.85
CLPTM1-208ENST00000588274 KIAA0232Q92628 1395 aa20.35■□□□□ 0.85
CLPTM1-208ENST00000588274 KDM2AQ9Y2K7 1162 aa20.35■□□□□ 0.85
CLPTM1-208ENST00000588274 SPATA31A1Q5TZJ5 1347 aa20.34■□□□□ 0.85
CLPTM1-208ENST00000588274 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
CLPTM1-208ENST00000588274 PSDA5PKW4 1024 aaPredicted RBP20.34■□□□□ 0.85
CLPTM1-208ENST00000588274 HRCP23327 699 aa20.34■□□□□ 0.85
CLPTM1-208ENST00000588274 BAG6P46379 1132 aa20.34■□□□□ 0.85
CLPTM1-208ENST00000588274 STAC3Q96MF2 364 aa20.33■□□□□ 0.85
CLPTM1-208ENST00000588274 A0A0G2JS52 829 aa20.32■□□□□ 0.84
CLPTM1-208ENST00000588274 MYT1Q01538 1121 aa20.32■□□□□ 0.84
CLPTM1-208ENST00000588274 NUDT16Q96DE0 195 aaKnown RBP20.32■□□□□ 0.84
CLPTM1-208ENST00000588274 PRDM11Q9NQV5 511 aa20.32■□□□□ 0.84
CLPTM1-208ENST00000588274 EN1Q05925 392 aaPredicted RBP20.31■□□□□ 0.84
CLPTM1-208ENST00000588274 NGDNQ8NEJ9 315 aaKnown RBP20.31■□□□□ 0.84
CLPTM1-208ENST00000588274 CAMTA1Q9Y6Y1 1673 aa20.31■□□□□ 0.84
CLPTM1-208ENST00000588274 RREB1Q92766 1687 aa20.3■□□□□ 0.84
CLPTM1-208ENST00000588274 SSH2Q76I76 1423 aa20.29■□□□□ 0.84
CLPTM1-208ENST00000588274 CHRNA2Q15822 529 aa20.29■□□□□ 0.84
CLPTM1-208ENST00000588274 USP19O94966 1318 aa20.28■□□□□ 0.84
CLPTM1-208ENST00000588274 PAK3O75914 559 aaPredicted RBP20.28■□□□□ 0.84
CLPTM1-208ENST00000588274 CPDO75976 1380 aa20.27■□□□□ 0.84
CLPTM1-208ENST00000588274 NUP188Q5SRE5 1749 aa20.27■□□□□ 0.83
CLPTM1-208ENST00000588274 CAMKK2Q96RR4 588 aa20.26■□□□□ 0.83
CLPTM1-208ENST00000588274 CDK19Q9BWU1 502 aa20.26■□□□□ 0.83
CLPTM1-208ENST00000588274 ACEP12821 1306 aa20.26■□□□□ 0.83
CLPTM1-208ENST00000588274 PLEKHG3A1L390 1219 aa20.25■□□□□ 0.83
CLPTM1-208ENST00000588274 EZH2Q15910 746 aaKnown RBP20.24■□□□□ 0.83
CLPTM1-208ENST00000588274 ZC3H6P61129 1189 aaKnown RBP20.23■□□□□ 0.83
CLPTM1-208ENST00000588274 R3HDM1Q15032 1099 aaKnown RBP20.23■□□□□ 0.83
CLPTM1-208ENST00000588274 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
CLPTM1-208ENST00000588274 NUTM2GQ5VZR2 741 aa20.23■□□□□ 0.83
CLPTM1-208ENST00000588274 BARGINQ6ZT62 677 aa20.23■□□□□ 0.83
CLPTM1-208ENST00000588274 PARP4Q9UKK3 1724 aaKnown RBP20.23■□□□□ 0.83
CLPTM1-208ENST00000588274 STRN4Q9NRL3 753 aa20.22■□□□□ 0.83
CLPTM1-208ENST00000588274 CCDC61Q9Y6R9 512 aa20.22■□□□□ 0.83
CLPTM1-208ENST00000588274 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
CLPTM1-208ENST00000588274 PARD3Q8TEW0 1356 aa20.21■□□□□ 0.83
CLPTM1-208ENST00000588274 COL5A2P05997 1499 aaPredicted RBP20.21■□□□□ 0.83
CLPTM1-208ENST00000588274 TRIM37O94972 964 aa20.2■□□□□ 0.82
CLPTM1-208ENST00000588274 NBPF1Q3BBV0 1214 aa20.2■□□□□ 0.82
CLPTM1-208ENST00000588274 SLIT3O75094 1523 aa20.2■□□□□ 0.82
CLPTM1-208ENST00000588274 QRICH2Q9H0J4 1663 aa20.19■□□□□ 0.82
CLPTM1-208ENST00000588274 LARP1Q6PKG0 1096 aaKnown RBP20.19■□□□□ 0.82
CLPTM1-208ENST00000588274 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
CLPTM1-208ENST00000588274 PPIP5K1Q6PFW1 1433 aa20.19■□□□□ 0.82
CLPTM1-208ENST00000588274 LRRC37A3O60309 1634 aa20.18■□□□□ 0.82
CLPTM1-208ENST00000588274 PIK3C2AO00443 1686 aa20.16■□□□□ 0.82
CLPTM1-208ENST00000588274 COL18A1P39060 1754 aa20.16■□□□□ 0.82
CLPTM1-208ENST00000588274 USP35Q9P2H5 1018 aa20.16■□□□□ 0.82
CLPTM1-208ENST00000588274 USP6P35125 1406 aa20.15■□□□□ 0.82
CLPTM1-208ENST00000588274 RGPD3A6NKT7 1758 aaPredicted RBP20.15■□□□□ 0.82
CLPTM1-208ENST00000588274 RGPD4Q7Z3J3 1758 aa20.15■□□□□ 0.82
CLPTM1-208ENST00000588274 WNK3Q9BYP7 1800 aa20.15■□□□□ 0.82
CLPTM1-208ENST00000588274 TCP11L2Q8N4U5 519 aa20.14■□□□□ 0.81
CLPTM1-208ENST00000588274 ABTB2Q8N961 1025 aa20.14■□□□□ 0.81
CLPTM1-208ENST00000588274 BRD4O60885 1362 aaPredicted RBP20.13■□□□□ 0.81
CLPTM1-208ENST00000588274 APBA3O96018 575 aa20.13■□□□□ 0.81
CLPTM1-208ENST00000588274 GCP02774 474 aa20.13■□□□□ 0.81
CLPTM1-208ENST00000588274 CRB1P82279 1406 aa20.12■□□□□ 0.81
CLPTM1-208ENST00000588274 CENPJQ9HC77 1338 aaPredicted RBP20.12■□□□□ 0.81
CLPTM1-208ENST00000588274 THRAP3Q9Y2W1 955 aaKnown RBP20.11■□□□□ 0.81
CLPTM1-208ENST00000588274 AATKQ6ZMQ8 1374 aa20.1■□□□□ 0.81
CLPTM1-208ENST00000588274 CABP2Q9NPB3 220 aa20.1■□□□□ 0.81
CLPTM1-208ENST00000588274 SBF2Q86WG5 1849 aa20.1■□□□□ 0.81
CLPTM1-208ENST00000588274 NLRP13Q86W25 1043 aa20.09■□□□□ 0.81
CLPTM1-208ENST00000588274 TRPM1Q7Z4N2 1603 aa20.09■□□□□ 0.81
CLPTM1-208ENST00000588274 EVA1CP58658 441 aa20.08■□□□□ 0.81
CLPTM1-208ENST00000588274 PDE3BQ13370 1112 aa20.08■□□□□ 0.81
CLPTM1-208ENST00000588274 OVOS2A0A0G2JMS6 1433 aa20.08■□□□□ 0.8
CLPTM1-208ENST00000588274 OVOS2A0A0J9YW53 1432 aa20.08■□□□□ 0.8
CLPTM1-208ENST00000588274 OVOS2Q6IE36 1432 aa20.08■□□□□ 0.8
CLPTM1-208ENST00000588274 SRPK2P78362 688 aaKnown RBP20.07■□□□□ 0.8
CLPTM1-208ENST00000588274 CASZ1Q86V15 1759 aa20.06■□□□□ 0.8
CLPTM1-208ENST00000588274 CPSF1Q10570 1443 aaKnown RBP20.06■□□□□ 0.8
CLPTM1-208ENST00000588274 AKAP12Q02952 1782 aa20.06■□□□□ 0.8
CLPTM1-208ENST00000588274 CABP1Q9NZU7 370 aa20.05■□□□□ 0.8
CLPTM1-208ENST00000588274 NFAT5O94916 1531 aa20.05■□□□□ 0.8
CLPTM1-208ENST00000588274 BCL9O00512 1426 aa20.03■□□□□ 0.8
CLPTM1-208ENST00000588274 PTF1AQ7RTS3 328 aa20.03■□□□□ 0.8
CLPTM1-208ENST00000588274 AXIN2Q9Y2T1 843 aa20.03■□□□□ 0.8
CLPTM1-208ENST00000588274 NLRP6P59044 892 aa20.01■□□□□ 0.79
CLPTM1-208ENST00000588274 ANO8Q9HCE9 1232 aaPredicted RBP20.01■□□□□ 0.79
CLPTM1-208ENST00000588274 RGPD5Q99666 1765 aa20■□□□□ 0.79
CLPTM1-208ENST00000588274 USP54Q70EL1 1684 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms