RNA–Protein interactions for RNA: ENST00000588143.5

GRN-211, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-211ENST00000588143 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
GRN-211ENST00000588143 NGLY1Q96IV0 654 aa20.92■□□□□ 0.94
GRN-211ENST00000588143 C8orf37Q96NL8 207 aa20.92■□□□□ 0.94
GRN-211ENST00000588143 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
GRN-211ENST00000588143 ZNF772Q68DY9 489 aaPredicted RBP20.91■□□□□ 0.94
GRN-211ENST00000588143 SSH2Q76I76 1423 aa20.91■□□□□ 0.94
GRN-211ENST00000588143 FNBP4Q8N3X1 1017 aaPredicted RBP20.91■□□□□ 0.94
GRN-211ENST00000588143 ABTB2Q8N961 1025 aa20.91■□□□□ 0.94
GRN-211ENST00000588143 USP6P35125 1406 aa20.9■□□□□ 0.94
GRN-211ENST00000588143 HSPA5P11021 654 aaKnown RBP20.9■□□□□ 0.94
GRN-211ENST00000588143 NINLQ9Y2I6 1382 aa20.89■□□□□ 0.93
GRN-211ENST00000588143 POTEAQ6S8J7 498 aa20.89■□□□□ 0.93
GRN-211ENST00000588143 TERF2IPQ9NYB0 399 aa20.89■□□□□ 0.93
GRN-211ENST00000588143 AFF2P51816 1311 aa20.88■□□□□ 0.93
GRN-211ENST00000588143 HAP1P54257 671 aaPredicted RBP20.88■□□□□ 0.93
GRN-211ENST00000588143 ILDR2Q71H61 639 aa20.88■□□□□ 0.93
GRN-211ENST00000588143 NLRP13Q86W25 1043 aa20.88■□□□□ 0.93
GRN-211ENST00000588143 ALS2Q96Q42 1657 aa20.88■□□□□ 0.93
GRN-211ENST00000588143 TTC21BQ7Z4L5 1316 aa20.87■□□□□ 0.93
GRN-211ENST00000588143 HDGFL2Q7Z4V5 671 aaPredicted RBP20.87■□□□□ 0.93
GRN-211ENST00000588143 KTN1Q86UP2 1357 aaKnown RBP20.86■□□□□ 0.93
GRN-211ENST00000588143 TTC21AQ8NDW8 1320 aa20.85■□□□□ 0.93
GRN-211ENST00000588143 PLEKHG5O94827 1062 aa20.85■□□□□ 0.93
GRN-211ENST00000588143 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
GRN-211ENST00000588143 CD163L1Q9NR16 1453 aa20.85■□□□□ 0.93
GRN-211ENST00000588143 FAM83GA6ND36 823 aa20.84■□□□□ 0.93
GRN-211ENST00000588143 NLRP6P59044 892 aa20.84■□□□□ 0.93
GRN-211ENST00000588143 QTRT2Q9H974 415 aaKnown RBP20.83■□□□□ 0.93
GRN-211ENST00000588143 USP21Q9UK80 565 aa20.83■□□□□ 0.93
GRN-211ENST00000588143 USP19O94966 1318 aa20.81■□□□□ 0.92
GRN-211ENST00000588143 GCP02774 474 aa20.81■□□□□ 0.92
GRN-211ENST00000588143 UNC5CLQ8IV45 518 aa20.79■□□□□ 0.92
GRN-211ENST00000588143 A0A1W2PP64 1363 aa20.79■□□□□ 0.92
GRN-211ENST00000588143 BCL9LQ86UU0 1499 aa20.79■□□□□ 0.92
GRN-211ENST00000588143 AKAP12Q02952 1782 aa20.78■□□□□ 0.92
GRN-211ENST00000588143 RXRBP28702 533 aa20.78■□□□□ 0.92
GRN-211ENST00000588143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.78■□□□□ 0.92
GRN-211ENST00000588143 TRPC5Q9UL62 973 aaPredicted RBP20.78■□□□□ 0.92
GRN-211ENST00000588143 EDC4Q6P2E9 1401 aaKnown RBP20.78■□□□□ 0.92
GRN-211ENST00000588143 ANKRD36BQ8N2N9 1353 aa20.77■□□□□ 0.92
GRN-211ENST00000588143 SLIT2O94813 1529 aa20.77■□□□□ 0.92
GRN-211ENST00000588143 USP31Q70CQ4 1352 aa20.76■□□□□ 0.91
GRN-211ENST00000588143 C11orf95C9JLR9 678 aaPredicted RBP20.76■□□□□ 0.91
GRN-211ENST00000588143 ZC3H6P61129 1189 aaKnown RBP20.76■□□□□ 0.91
GRN-211ENST00000588143 PRDM11Q9NQV5 511 aa20.76■□□□□ 0.91
GRN-211ENST00000588143 MARF1Q9Y4F3 1742 aaKnown RBP20.75■□□□□ 0.91
GRN-211ENST00000588143 CPDO75976 1380 aa20.75■□□□□ 0.91
GRN-211ENST00000588143 RBM6P78332 1123 aaKnown RBP20.75■□□□□ 0.91
GRN-211ENST00000588143 KCNH5Q8NCM2 988 aa20.75■□□□□ 0.91
GRN-211ENST00000588143 KIAA0232Q92628 1395 aa20.74■□□□□ 0.91
GRN-211ENST00000588143 NME9Q86XW9 330 aa20.74■□□□□ 0.91
GRN-211ENST00000588143 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
GRN-211ENST00000588143 ABCA3Q99758 1704 aa20.73■□□□□ 0.91
GRN-211ENST00000588143 CRYBG1Q9Y4K1 1723 aa20.73■□□□□ 0.91
GRN-211ENST00000588143 CARD14Q9BXL6 1004 aa20.73■□□□□ 0.91
GRN-211ENST00000588143 BTG4Q9NY30 223 aa20.73■□□□□ 0.91
GRN-211ENST00000588143 ZRANB1Q9UGI0 708 aa20.73■□□□□ 0.91
GRN-211ENST00000588143 ATRNO75882 1429 aa20.72■□□□□ 0.91
GRN-211ENST00000588143 VPS72Q15906 364 aa20.71■□□□□ 0.91
GRN-211ENST00000588143 GJD4Q96KN9 370 aaPredicted RBP20.71■□□□□ 0.91
GRN-211ENST00000588143 NRKQ7Z2Y5 1582 aa20.71■□□□□ 0.91
GRN-211ENST00000588143 PIK3C2AO00443 1686 aa20.7■□□□□ 0.91
GRN-211ENST00000588143 CHRNA2Q15822 529 aa20.7■□□□□ 0.9
GRN-211ENST00000588143 SLIT3O75094 1523 aa20.69■□□□□ 0.9
GRN-211ENST00000588143 FYB1O15117 783 aa20.69■□□□□ 0.9
GRN-211ENST00000588143 ARHGEF25Q86VW2 580 aa20.69■□□□□ 0.9
GRN-211ENST00000588143 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
GRN-211ENST00000588143 PHRF1Q9P1Y6 1649 aaKnown RBP20.67■□□□□ 0.9
GRN-211ENST00000588143 COL14A1Q05707 1796 aaKnown RBP20.67■□□□□ 0.9
GRN-211ENST00000588143 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
GRN-211ENST00000588143 SOCS7O14512 581 aa20.66■□□□□ 0.9
GRN-211ENST00000588143 COG3Q96JB2 828 aa20.66■□□□□ 0.9
GRN-211ENST00000588143 CDK12Q9NYV4 1490 aaPredicted RBP20.66■□□□□ 0.9
GRN-211ENST00000588143 NWD2Q9ULI1 1742 aa20.66■□□□□ 0.9
GRN-211ENST00000588143 KIF7Q2M1P5 1343 aa20.65■□□□□ 0.9
GRN-211ENST00000588143 ONECUT3O60422 494 aaPredicted RBP20.65■□□□□ 0.9
GRN-211ENST00000588143 PANK3Q9H999 370 aa20.65■□□□□ 0.9
GRN-211ENST00000588143 EVA1CP58658 441 aa20.64■□□□□ 0.89
GRN-211ENST00000588143 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.64■□□□□ 0.89
GRN-211ENST00000588143 OVOS2A0A0J9YW53 1432 aa20.63■□□□□ 0.89
GRN-211ENST00000588143 OVOS2Q6IE36 1432 aa20.63■□□□□ 0.89
GRN-211ENST00000588143 SOX12O15370 315 aa20.62■□□□□ 0.89
GRN-211ENST00000588143 AXIN2Q9Y2T1 843 aa20.62■□□□□ 0.89
GRN-211ENST00000588143 MYOM1P52179 1685 aa20.61■□□□□ 0.89
GRN-211ENST00000588143 PLCH1Q4KWH8 1693 aa20.61■□□□□ 0.89
GRN-211ENST00000588143 CAMTA1Q9Y6Y1 1673 aa20.61■□□□□ 0.89
GRN-211ENST00000588143 SPATA31A5Q5VU36 1347 aa20.61■□□□□ 0.89
GRN-211ENST00000588143 SPATA31A7Q8IWB4 1347 aa20.61■□□□□ 0.89
GRN-211ENST00000588143 GGNBP2Q9H3C7 697 aa20.61■□□□□ 0.89
GRN-211ENST00000588143 CCDC9Q9Y3X0 531 aaKnown RBP20.61■□□□□ 0.89
GRN-211ENST00000588143 USP54Q70EL1 1684 aa20.61■□□□□ 0.89
GRN-211ENST00000588143 CGNL1Q0VF96 1302 aa20.6■□□□□ 0.89
GRN-211ENST00000588143 NFAT5O94916 1531 aa20.6■□□□□ 0.89
GRN-211ENST00000588143 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
GRN-211ENST00000588143 STRN4Q9NRL3 753 aa20.6■□□□□ 0.89
GRN-211ENST00000588143 NSD3Q9BZ95 1437 aa20.6■□□□□ 0.89
GRN-211ENST00000588143 ZBTB7CA1YPR0 619 aa20.59■□□□□ 0.89
GRN-211ENST00000588143 WASHC2AQ641Q2 1341 aa20.58■□□□□ 0.89
GRN-211ENST00000588143 SPATA31A1Q5TZJ5 1347 aa20.57■□□□□ 0.88
GRN-211ENST00000588143 LARP1Q6PKG0 1096 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms