RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 TOPAZ1Q8N9V7 1692 aa14.22□□□□□ -0.13
TPM4-207ENST00000588032 POTEAQ6S8J7 498 aa14.21□□□□□ -0.13
TPM4-207ENST00000588032 TESK2Q96S53 571 aa14.21□□□□□ -0.13
TPM4-207ENST00000588032 USP47Q96K76 1375 aa14.21□□□□□ -0.14
TPM4-207ENST00000588032 AFF2P51816 1311 aa14.2□□□□□ -0.14
TPM4-207ENST00000588032 FNBP4Q8N3X1 1017 aaPredicted RBP14.2□□□□□ -0.14
TPM4-207ENST00000588032 TRPM3Q9HCF6 1732 aaPredicted RBP14.18□□□□□ -0.14
TPM4-207ENST00000588032 TMF1P82094 1093 aa14.18□□□□□ -0.14
TPM4-207ENST00000588032 ABTB2Q8N961 1025 aa14.18□□□□□ -0.14
TPM4-207ENST00000588032 CABLES1Q8TDN4 633 aa14.18□□□□□ -0.14
TPM4-207ENST00000588032 CDCA8Q53HL2 280 aa14.17□□□□□ -0.14
TPM4-207ENST00000588032 NLRP13Q86W25 1043 aa14.17□□□□□ -0.14
TPM4-207ENST00000588032 USP21Q9UK80 565 aa14.17□□□□□ -0.14
TPM4-207ENST00000588032 USP6P35125 1406 aa14.16□□□□□ -0.14
TPM4-207ENST00000588032 RXRBP28702 533 aa14.16□□□□□ -0.14
TPM4-207ENST00000588032 QTRT2Q9H974 415 aaKnown RBP14.16□□□□□ -0.14
TPM4-207ENST00000588032 ALS2Q96Q42 1657 aa14.16□□□□□ -0.14
TPM4-207ENST00000588032 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
TPM4-207ENST00000588032 NINLQ9Y2I6 1382 aa14.15□□□□□ -0.14
TPM4-207ENST00000588032 TMC1Q8TDI8 760 aa14.15□□□□□ -0.14
TPM4-207ENST00000588032 TERF2IPQ9NYB0 399 aa14.15□□□□□ -0.14
TPM4-207ENST00000588032 TRPC5Q9UL62 973 aaPredicted RBP14.15□□□□□ -0.14
TPM4-207ENST00000588032 SOCS7O14512 581 aa14.14□□□□□ -0.15
TPM4-207ENST00000588032 PLEKHG5O94827 1062 aa14.14□□□□□ -0.15
TPM4-207ENST00000588032 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
TPM4-207ENST00000588032 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
TPM4-207ENST00000588032 HDGFL2Q7Z4V5 671 aaPredicted RBP14.14□□□□□ -0.15
TPM4-207ENST00000588032 SSH2Q76I76 1423 aa14.14□□□□□ -0.15
TPM4-207ENST00000588032 TTC21AQ8NDW8 1320 aa14.14□□□□□ -0.15
TPM4-207ENST00000588032 KTN1Q86UP2 1357 aaKnown RBP14.13□□□□□ -0.15
TPM4-207ENST00000588032 RBM6P78332 1123 aaKnown RBP14.13□□□□□ -0.15
TPM4-207ENST00000588032 UNC5CLQ8IV45 518 aa14.13□□□□□ -0.15
TPM4-207ENST00000588032 SLC12A5Q9H2X9 1139 aa14.13□□□□□ -0.15
TPM4-207ENST00000588032 FAM83GA6ND36 823 aa14.12□□□□□ -0.15
TPM4-207ENST00000588032 NLRP6P59044 892 aa14.12□□□□□ -0.15
TPM4-207ENST00000588032 NUTM2GQ5VZR2 741 aa14.12□□□□□ -0.15
TPM4-207ENST00000588032 MARF1Q9Y4F3 1742 aaKnown RBP14.12□□□□□ -0.15
TPM4-207ENST00000588032 TTC21BQ7Z4L5 1316 aa14.12□□□□□ -0.15
TPM4-207ENST00000588032 BCL9LQ86UU0 1499 aa14.12□□□□□ -0.15
TPM4-207ENST00000588032 SLIT2O94813 1529 aa14.11□□□□□ -0.15
TPM4-207ENST00000588032 USP19O94966 1318 aa14.11□□□□□ -0.15
TPM4-207ENST00000588032 PRDM11Q9NQV5 511 aa14.1□□□□□ -0.15
TPM4-207ENST00000588032 CDK12Q9NYV4 1490 aaPredicted RBP14.1□□□□□ -0.15
TPM4-207ENST00000588032 GCP02774 474 aa14.09□□□□□ -0.15
TPM4-207ENST00000588032 ATRNO75882 1429 aa14.08□□□□□ -0.15
TPM4-207ENST00000588032 CD163L1Q9NR16 1453 aa14.08□□□□□ -0.16
TPM4-207ENST00000588032 ABCA3Q99758 1704 aa14.08□□□□□ -0.16
TPM4-207ENST00000588032 KCNH5Q8NCM2 988 aa14.08□□□□□ -0.16
TPM4-207ENST00000588032 GJD4Q96KN9 370 aaPredicted RBP14.08□□□□□ -0.16
TPM4-207ENST00000588032 AKAP12Q02952 1782 aa14.07□□□□□ -0.16
TPM4-207ENST00000588032 HSPA5P11021 654 aaKnown RBP14.07□□□□□ -0.16
TPM4-207ENST00000588032 ZC3H6P61129 1189 aaKnown RBP14.07□□□□□ -0.16
TPM4-207ENST00000588032 VPS72Q15906 364 aa14.07□□□□□ -0.16
TPM4-207ENST00000588032 BTG4Q9NY30 223 aa14.07□□□□□ -0.16
TPM4-207ENST00000588032 CPDO75976 1380 aa14.07□□□□□ -0.16
TPM4-207ENST00000588032 KIAA0232Q92628 1395 aa14.07□□□□□ -0.16
TPM4-207ENST00000588032 EDC4Q6P2E9 1401 aaKnown RBP14.07□□□□□ -0.16
TPM4-207ENST00000588032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
TPM4-207ENST00000588032 CRYBG1Q9Y4K1 1723 aa14.06□□□□□ -0.16
TPM4-207ENST00000588032 A0A1W2PP64 1363 aa14.06□□□□□ -0.16
TPM4-207ENST00000588032 USP31Q70CQ4 1352 aa14.06□□□□□ -0.16
TPM4-207ENST00000588032 ANKRD36BQ8N2N9 1353 aa14.06□□□□□ -0.16
TPM4-207ENST00000588032 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.05□□□□□ -0.16
TPM4-207ENST00000588032 COL14A1Q05707 1796 aaKnown RBP14.05□□□□□ -0.16
TPM4-207ENST00000588032 NWD2Q9ULI1 1742 aa14.04□□□□□ -0.16
TPM4-207ENST00000588032 PHRF1Q9P1Y6 1649 aaKnown RBP14.04□□□□□ -0.16
TPM4-207ENST00000588032 MON2Q7Z3U7 1717 aa14.04□□□□□ -0.16
TPM4-207ENST00000588032 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
TPM4-207ENST00000588032 CCDC9Q9Y3X0 531 aaKnown RBP14.03□□□□□ -0.16
TPM4-207ENST00000588032 SLIT3O75094 1523 aa14.03□□□□□ -0.16
TPM4-207ENST00000588032 NRKQ7Z2Y5 1582 aa14.03□□□□□ -0.16
TPM4-207ENST00000588032 PIK3C2AO00443 1686 aa14.02□□□□□ -0.16
TPM4-207ENST00000588032 EVA1CP58658 441 aa14.02□□□□□ -0.17
TPM4-207ENST00000588032 NME9Q86XW9 330 aa14.02□□□□□ -0.17
TPM4-207ENST00000588032 PLCH1Q4KWH8 1693 aa14.01□□□□□ -0.17
TPM4-207ENST00000588032 AATKQ6ZMQ8 1374 aa14.01□□□□□ -0.17
TPM4-207ENST00000588032 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
TPM4-207ENST00000588032 ARHGEF25Q86VW2 580 aa14.01□□□□□ -0.17
TPM4-207ENST00000588032 RGS12O14924 1447 aa13.99□□□□□ -0.17
TPM4-207ENST00000588032 SPATA31A5Q5VU36 1347 aa13.99□□□□□ -0.17
TPM4-207ENST00000588032 SPATA31A7Q8IWB4 1347 aa13.99□□□□□ -0.17
TPM4-207ENST00000588032 COG3Q96JB2 828 aa13.99□□□□□ -0.17
TPM4-207ENST00000588032 STRN4Q9NRL3 753 aa13.99□□□□□ -0.17
TPM4-207ENST00000588032 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
TPM4-207ENST00000588032 POLR3GLQ9BT43 218 aa13.98□□□□□ -0.17
TPM4-207ENST00000588032 ZBTB7CA1YPR0 619 aa13.97□□□□□ -0.17
TPM4-207ENST00000588032 FYB1O15117 783 aa13.97□□□□□ -0.17
TPM4-207ENST00000588032 SOX12O15370 315 aa13.97□□□□□ -0.17
TPM4-207ENST00000588032 NRAPQ86VF7 1730 aa13.97□□□□□ -0.17
TPM4-207ENST00000588032 CAMTA1Q9Y6Y1 1673 aa13.97□□□□□ -0.17
TPM4-207ENST00000588032 OVOS2A0A0J9YW53 1432 aa13.97□□□□□ -0.17
TPM4-207ENST00000588032 OVOS2Q6IE36 1432 aa13.97□□□□□ -0.17
TPM4-207ENST00000588032 GLI3P10071 1580 aa13.96□□□□□ -0.17
TPM4-207ENST00000588032 SPATA31A1Q5TZJ5 1347 aa13.96□□□□□ -0.17
TPM4-207ENST00000588032 USP54Q70EL1 1684 aa13.96□□□□□ -0.17
TPM4-207ENST00000588032 SEPT12Q8IYM1 358 aa13.96□□□□□ -0.17
TPM4-207ENST00000588032 CARD14Q9BXL6 1004 aa13.96□□□□□ -0.17
TPM4-207ENST00000588032 THRAP3Q9Y2W1 955 aaKnown RBP13.96□□□□□ -0.17
TPM4-207ENST00000588032 LMO7Q8WWI1 1683 aa13.95□□□□□ -0.18
TPM4-207ENST00000588032 LARP1Q6PKG0 1096 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms