RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 APAF1O14727 1248 aa20.31■□□□□ 0.84
PPP6R1-204ENST00000587457 USP32Q8NFA0 1604 aa20.3■□□□□ 0.84
PPP6R1-204ENST00000587457 FSD2A1L4K1 749 aa20.3■□□□□ 0.84
PPP6R1-204ENST00000587457 MTHFSP49914 203 aa20.3■□□□□ 0.84
PPP6R1-204ENST00000587457 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
PPP6R1-204ENST00000587457 ZNF521Q96K83 1311 aa20.29■□□□□ 0.84
PPP6R1-204ENST00000587457 ABCC11Q96J66 1382 aa20.29■□□□□ 0.84
PPP6R1-204ENST00000587457 CABP1Q9NZU7 370 aa20.28■□□□□ 0.84
PPP6R1-204ENST00000587457 NSD2O96028 1365 aa20.28■□□□□ 0.84
PPP6R1-204ENST00000587457 NRXN3Q9Y4C0 1643 aa20.28■□□□□ 0.84
PPP6R1-204ENST00000587457 HDGFP51858 240 aaKnown RBP20.28■□□□□ 0.84
PPP6R1-204ENST00000587457 GGNBP2Q9H3C7 697 aa20.28■□□□□ 0.84
PPP6R1-204ENST00000587457 TERF2IPQ9NYB0 399 aa20.28■□□□□ 0.84
PPP6R1-204ENST00000587457 TMEM2Q9UHN6 1383 aa20.28■□□□□ 0.84
PPP6R1-204ENST00000587457 IGHDP01880 384 aa20.27■□□□□ 0.84
PPP6R1-204ENST00000587457 TXNDC2Q86VQ3 553 aa20.27■□□□□ 0.84
PPP6R1-204ENST00000587457 GZF1Q9H116 711 aaPredicted RBP20.27■□□□□ 0.84
PPP6R1-204ENST00000587457 DLC1Q96QB1 1528 aa20.27■□□□□ 0.84
PPP6R1-204ENST00000587457 SETD1AO15047 1707 aaKnown RBP20.27■□□□□ 0.84
PPP6R1-204ENST00000587457 CD163L1Q9NR16 1453 aa20.27■□□□□ 0.83
PPP6R1-204ENST00000587457 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
PPP6R1-204ENST00000587457 HDGFL2Q7Z4V5 671 aaPredicted RBP20.24■□□□□ 0.83
PPP6R1-204ENST00000587457 FYB1O15117 783 aa20.23■□□□□ 0.83
PPP6R1-204ENST00000587457 CFAP53Q96M91 514 aa20.23■□□□□ 0.83
PPP6R1-204ENST00000587457 LTKP29376 864 aa20.22■□□□□ 0.83
PPP6R1-204ENST00000587457 MCM4P33991 863 aa20.21■□□□□ 0.83
PPP6R1-204ENST00000587457 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
PPP6R1-204ENST00000587457 VIRMAQ69YN4 1812 aaKnown RBP20.21■□□□□ 0.83
PPP6R1-204ENST00000587457 SLFN5Q08AF3 891 aa20.21■□□□□ 0.83
PPP6R1-204ENST00000587457 TBC1D2Q9BYX2 928 aa20.21■□□□□ 0.83
PPP6R1-204ENST00000587457 UBR1Q8IWV7 1749 aa20.2■□□□□ 0.83
PPP6R1-204ENST00000587457 WASLO00401 505 aaPredicted RBP20.2■□□□□ 0.82
PPP6R1-204ENST00000587457 MAPK8IP3Q9UPT6 1336 aa20.19■□□□□ 0.82
PPP6R1-204ENST00000587457 SHPRHQ149N8 1683 aa20.19■□□□□ 0.82
PPP6R1-204ENST00000587457 NLRP1Q9C000 1473 aa20.19■□□□□ 0.82
PPP6R1-204ENST00000587457 BCAR3O75815 825 aa20.19■□□□□ 0.82
PPP6R1-204ENST00000587457 SPRYD3Q8NCJ5 442 aa20.19■□□□□ 0.82
PPP6R1-204ENST00000587457 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
PPP6R1-204ENST00000587457 MRE11P49959 708 aa20.18■□□□□ 0.82
PPP6R1-204ENST00000587457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
PPP6R1-204ENST00000587457 TRMT2AQ8IZ69 625 aaKnown RBP20.17■□□□□ 0.82
PPP6R1-204ENST00000587457 RRP7AQ9Y3A4 280 aaKnown RBP20.17■□□□□ 0.82
PPP6R1-204ENST00000587457 NEUROD2Q15784 382 aa20.17■□□□□ 0.82
PPP6R1-204ENST00000587457 ADAMTS13Q76LX8 1427 aa20.17■□□□□ 0.82
PPP6R1-204ENST00000587457 RUNDC1Q96C34 613 aa20.17■□□□□ 0.82
PPP6R1-204ENST00000587457 TRAK2O60296 914 aa20.16■□□□□ 0.82
PPP6R1-204ENST00000587457 UPF2Q9HAU5 1272 aaKnown RBP20.16■□□□□ 0.82
PPP6R1-204ENST00000587457 ESPNB1AK53 854 aa20.16■□□□□ 0.82
PPP6R1-204ENST00000587457 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
PPP6R1-204ENST00000587457 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.82
PPP6R1-204ENST00000587457 TBC1D32Q96NH3 1257 aa20.15■□□□□ 0.82
PPP6R1-204ENST00000587457 MYH16Q9H6N6 1097 aa20.15■□□□□ 0.82
PPP6R1-204ENST00000587457 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
PPP6R1-204ENST00000587457 TECPR2O15040 1411 aa20.15■□□□□ 0.82
PPP6R1-204ENST00000587457 FAM135BQ49AJ0 1406 aa20.15■□□□□ 0.82
PPP6R1-204ENST00000587457 SLC26A8Q96RN1 970 aa20.15■□□□□ 0.82
PPP6R1-204ENST00000587457 WWC1Q8IX03 1113 aa20.14■□□□□ 0.82
PPP6R1-204ENST00000587457 TCP11L2Q8N4U5 519 aa20.14■□□□□ 0.82
PPP6R1-204ENST00000587457 ROBO2Q9HCK4 1378 aa20.14■□□□□ 0.81
PPP6R1-204ENST00000587457 PLEKHG1Q9ULL1 1385 aa20.14■□□□□ 0.81
PPP6R1-204ENST00000587457 SIRT1Q96EB6 747 aa20.14■□□□□ 0.81
PPP6R1-204ENST00000587457 E9PSI1 815 aa20.13■□□□□ 0.81
PPP6R1-204ENST00000587457 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
PPP6R1-204ENST00000587457 NUDT16Q96DE0 195 aaKnown RBP20.13■□□□□ 0.81
PPP6R1-204ENST00000587457 ERBB4Q15303 1308 aa20.13■□□□□ 0.81
PPP6R1-204ENST00000587457 PPIP5K1Q6PFW1 1433 aa20.13■□□□□ 0.81
PPP6R1-204ENST00000587457 EID1Q9Y6B2 187 aa20.13■□□□□ 0.81
PPP6R1-204ENST00000587457 MED14O60244 1454 aa20.13■□□□□ 0.81
PPP6R1-204ENST00000587457 ATP7BP35670 1465 aa20.12■□□□□ 0.81
PPP6R1-204ENST00000587457 GRPEL1Q9HAV7 217 aa20.12■□□□□ 0.81
PPP6R1-204ENST00000587457 C3P01024 1663 aa20.11■□□□□ 0.81
PPP6R1-204ENST00000587457 U2SURPO15042 1029 aaKnown RBP20.11■□□□□ 0.81
PPP6R1-204ENST00000587457 FBLN1P23142 703 aa20.11■□□□□ 0.81
PPP6R1-204ENST00000587457 CPS1P31327 1500 aa20.11■□□□□ 0.81
PPP6R1-204ENST00000587457 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
PPP6R1-204ENST00000587457 IQSEC2Q5JU85 1478 aa20.1■□□□□ 0.81
PPP6R1-204ENST00000587457 CCDC61Q9Y6R9 512 aa20.09■□□□□ 0.81
PPP6R1-204ENST00000587457 KNDC1Q76NI1 1749 aa20.09■□□□□ 0.81
PPP6R1-204ENST00000587457 NKTRP30414 1462 aaKnown RBP20.08■□□□□ 0.81
PPP6R1-204ENST00000587457 CHMP5Q9NZZ3 219 aa20.08■□□□□ 0.81
PPP6R1-204ENST00000587457 COG6Q9Y2V7 657 aa20.08■□□□□ 0.81
PPP6R1-204ENST00000587457 CPSF1Q10570 1443 aaKnown RBP20.08■□□□□ 0.81
PPP6R1-204ENST00000587457 FER1L4A9Z1Z3 1794 aa20.08■□□□□ 0.8
PPP6R1-204ENST00000587457 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
PPP6R1-204ENST00000587457 TPM2P07951 284 aa20.07■□□□□ 0.8
PPP6R1-204ENST00000587457 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
PPP6R1-204ENST00000587457 PTPRUQ92729 1446 aa20.07■□□□□ 0.8
PPP6R1-204ENST00000587457 PDE3AQ14432 1141 aa20.07■□□□□ 0.8
PPP6R1-204ENST00000587457 NME9Q86XW9 330 aa20.07■□□□□ 0.8
PPP6R1-204ENST00000587457 PANK1Q8TE04 598 aa20.07■□□□□ 0.8
PPP6R1-204ENST00000587457 TRIM44Q96DX7 344 aaPredicted RBP20.07■□□□□ 0.8
PPP6R1-204ENST00000587457 PDCL3Q9H2J4 239 aa20.07■□□□□ 0.8
PPP6R1-204ENST00000587457 NUTM2FA1L443 756 aa20.06■□□□□ 0.8
PPP6R1-204ENST00000587457 ZRANB1Q9UGI0 708 aa20.06■□□□□ 0.8
PPP6R1-204ENST00000587457 THEMISQ8N1K5 641 aaPredicted RBP20.06■□□□□ 0.8
PPP6R1-204ENST00000587457 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
PPP6R1-204ENST00000587457 EDC4Q6P2E9 1401 aaKnown RBP20.05■□□□□ 0.8
PPP6R1-204ENST00000587457 ARHGAP23Q9P227 1491 aa20.05■□□□□ 0.8
PPP6R1-204ENST00000587457 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
PPP6R1-204ENST00000587457 SLIT1O75093 1534 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms