RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 NUCB1Q02818 461 aa20.63■□□□□ 0.89
RANBP3-209ENST00000587411 SSH1Q8WYL5 1049 aa20.63■□□□□ 0.89
RANBP3-209ENST00000587411 TNPO1Q92973 898 aaKnown RBP20.63■□□□□ 0.89
RANBP3-209ENST00000587411 TSR2Q969E8 191 aaKnown RBP20.63■□□□□ 0.89
RANBP3-209ENST00000587411 TRIM44Q96DX7 344 aaPredicted RBP20.63■□□□□ 0.89
RANBP3-209ENST00000587411 C14orf93Q9H972 538 aaKnown RBP20.63■□□□□ 0.89
RANBP3-209ENST00000587411 ANKRD36BQ8N2N9 1353 aa20.63■□□□□ 0.89
RANBP3-209ENST00000587411 HSP90AA2PQ14568 343 aaPredicted RBP20.63■□□□□ 0.89
RANBP3-209ENST00000587411 ZBTB40Q9NUA8 1239 aa20.63■□□□□ 0.89
RANBP3-209ENST00000587411 KIF16BQ96L93 1317 aa20.63■□□□□ 0.89
RANBP3-209ENST00000587411 RAB3GAP1Q15042 981 aa20.62■□□□□ 0.89
RANBP3-209ENST00000587411 ADGRB1O14514 1584 aa20.62■□□□□ 0.89
RANBP3-209ENST00000587411 LMTK2Q8IWU2 1503 aa20.62■□□□□ 0.89
RANBP3-209ENST00000587411 IPO8O15397 1037 aaKnown RBP20.62■□□□□ 0.89
RANBP3-209ENST00000587411 HSP90AB1P08238 724 aaKnown RBP20.62■□□□□ 0.89
RANBP3-209ENST00000587411 NOB1Q9ULX3 412 aaKnown RBP20.6■□□□□ 0.89
RANBP3-209ENST00000587411 TMEM57Q8N5G2 664 aa20.6■□□□□ 0.89
RANBP3-209ENST00000587411 TMPOP42166 694 aaKnown RBP20.59■□□□□ 0.89
RANBP3-209ENST00000587411 BMP2KLQ5H9B9 411 aa20.59■□□□□ 0.89
RANBP3-209ENST00000587411 PLEKHF1Q96S99 279 aa20.59■□□□□ 0.89
RANBP3-209ENST00000587411 PPRC1Q5VV67 1664 aaKnown RBP20.59■□□□□ 0.89
RANBP3-209ENST00000587411 CD109Q6YHK3 1445 aa20.59■□□□□ 0.89
RANBP3-209ENST00000587411 EVC2Q86UK5 1308 aa20.58■□□□□ 0.89
RANBP3-209ENST00000587411 CHD1LQ86WJ1 897 aa20.58■□□□□ 0.88
RANBP3-209ENST00000587411 ABCA9Q8IUA7 1624 aa20.58■□□□□ 0.88
RANBP3-209ENST00000587411 TRIM35Q9UPQ4 493 aa20.57■□□□□ 0.88
RANBP3-209ENST00000587411 ERBB4Q15303 1308 aa20.57■□□□□ 0.88
RANBP3-209ENST00000587411 CFAP74Q9C0B2 1584 aa20.56■□□□□ 0.88
RANBP3-209ENST00000587411 ALDH1L2Q3SY69 923 aa20.56■□□□□ 0.88
RANBP3-209ENST00000587411 RPGRIP1LQ68CZ1 1315 aa20.56■□□□□ 0.88
RANBP3-209ENST00000587411 PPLO60437 1756 aa20.56■□□□□ 0.88
RANBP3-209ENST00000587411 TPM2P07951 284 aa20.55■□□□□ 0.88
RANBP3-209ENST00000587411 GAS2L3Q86XJ1 694 aa20.55■□□□□ 0.88
RANBP3-209ENST00000587411 LNPKQ9C0E8 428 aa20.54■□□□□ 0.88
RANBP3-209ENST00000587411 CHMP4BQ9H444 224 aaKnown RBP20.54■□□□□ 0.88
RANBP3-209ENST00000587411 CCDC173Q0VFZ6 552 aa20.53■□□□□ 0.88
RANBP3-209ENST00000587411 COL3A1P02461 1466 aaPredicted RBP20.53■□□□□ 0.88
RANBP3-209ENST00000587411 IBTKQ9P2D0 1353 aaPredicted RBP20.53■□□□□ 0.88
RANBP3-209ENST00000587411 GOLGA6L22H0YM25 854 aa20.53■□□□□ 0.88
RANBP3-209ENST00000587411 K7ELQ4 463 aaPredicted RBP20.53■□□□□ 0.88
RANBP3-209ENST00000587411 KIF2CQ99661 725 aa20.53■□□□□ 0.88
RANBP3-209ENST00000587411 TULP4Q9NRJ4 1543 aa20.53■□□□□ 0.88
RANBP3-209ENST00000587411 U2SURPO15042 1029 aaKnown RBP20.52■□□□□ 0.88
RANBP3-209ENST00000587411 CHGAP10645 457 aaKnown RBP20.52■□□□□ 0.88
RANBP3-209ENST00000587411 CLEC17AQ6ZS10 378 aa20.52■□□□□ 0.88
RANBP3-209ENST00000587411 GCC1Q96CN9 775 aa20.52■□□□□ 0.88
RANBP3-209ENST00000587411 ZNF428Q96B54 188 aa20.52■□□□□ 0.88
RANBP3-209ENST00000587411 MED14O60244 1454 aa20.51■□□□□ 0.87
RANBP3-209ENST00000587411 BRPF1P55201 1214 aaPredicted RBP20.51■□□□□ 0.87
RANBP3-209ENST00000587411 PPP1R9BQ96SB3 815 aa20.51■□□□□ 0.87
RANBP3-209ENST00000587411 TMEM132EQ6IEE7 984 aa20.5■□□□□ 0.87
RANBP3-209ENST00000587411 REREQ9P2R6 1566 aa20.5■□□□□ 0.87
RANBP3-209ENST00000587411 GLI2P10070 1586 aa20.5■□□□□ 0.87
RANBP3-209ENST00000587411 ANP32BQ92688 251 aaKnown RBP20.49■□□□□ 0.87
RANBP3-209ENST00000587411 RIPK4P57078 832 aa20.48■□□□□ 0.87
RANBP3-209ENST00000587411 PKNOX2Q96KN3 472 aa20.48■□□□□ 0.87
RANBP3-209ENST00000587411 ARHGAP31Q2M1Z3 1444 aa20.47■□□□□ 0.87
RANBP3-209ENST00000587411 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
RANBP3-209ENST00000587411 NASPP49321 788 aaPredicted RBP20.47■□□□□ 0.87
RANBP3-209ENST00000587411 ARHGEF28Q8N1W1 1705 aaKnown RBP20.46■□□□□ 0.87
RANBP3-209ENST00000587411 ANKRD45Q5TZF3 282 aa20.46■□□□□ 0.87
RANBP3-209ENST00000587411 TBC1D9Q6ZT07 1266 aa20.46■□□□□ 0.87
RANBP3-209ENST00000587411 VSIG10Q8N0Z9 540 aa20.46■□□□□ 0.87
RANBP3-209ENST00000587411 NPATQ14207 1427 aa20.45■□□□□ 0.86
RANBP3-209ENST00000587411 ZSCAN30Q86W11 494 aa20.45■□□□□ 0.86
RANBP3-209ENST00000587411 CFAP44Q96MT7 982 aa20.45■□□□□ 0.86
RANBP3-209ENST00000587411 A0A1W2PP64 1363 aa20.45■□□□□ 0.86
RANBP3-209ENST00000587411 PIK3R4Q99570 1358 aa20.45■□□□□ 0.86
RANBP3-209ENST00000587411 PPIP5K1Q6PFW1 1433 aa20.45■□□□□ 0.86
RANBP3-209ENST00000587411 CD2BP2O95400 341 aaKnown RBP20.44■□□□□ 0.86
RANBP3-209ENST00000587411 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
RANBP3-209ENST00000587411 ZBTB7BO15156 539 aaPredicted RBP20.43■□□□□ 0.86
RANBP3-209ENST00000587411 SSFA2P28290 1259 aa20.43■□□□□ 0.86
RANBP3-209ENST00000587411 CABP2Q9NPB3 220 aa20.43■□□□□ 0.86
RANBP3-209ENST00000587411 KIDINS220Q9ULH0 1771 aa20.43■□□□□ 0.86
RANBP3-209ENST00000587411 CDC45O75419 566 aa20.42■□□□□ 0.86
RANBP3-209ENST00000587411 DIAPH1O60610 1272 aaKnown RBP20.42■□□□□ 0.86
RANBP3-209ENST00000587411 BAG4O95429 457 aaKnown RBP20.42■□□□□ 0.86
RANBP3-209ENST00000587411 GAS2L2Q8NHY3 880 aa20.42■□□□□ 0.86
RANBP3-209ENST00000587411 DDX49Q9Y6V7 483 aaKnown RBP20.42■□□□□ 0.86
RANBP3-209ENST00000587411 PTCH1Q13635 1447 aa20.41■□□□□ 0.86
RANBP3-209ENST00000587411 FOXD4L1Q9NU39 408 aa20.41■□□□□ 0.86
RANBP3-209ENST00000587411 ANKRD26Q9UPS8 1709 aa20.41■□□□□ 0.86
RANBP3-209ENST00000587411 PNPLA6Q8IY17 1366 aa20.41■□□□□ 0.86
RANBP3-209ENST00000587411 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
RANBP3-209ENST00000587411 TERF1P54274 439 aa20.4■□□□□ 0.86
RANBP3-209ENST00000587411 ZNF445P59923 1031 aa20.4■□□□□ 0.86
RANBP3-209ENST00000587411 GGNBP2Q9H3C7 697 aa20.4■□□□□ 0.86
RANBP3-209ENST00000587411 HS1BP3Q53T59 392 aa20.4■□□□□ 0.86
RANBP3-209ENST00000587411 ZMYND15Q9H091 742 aa20.4■□□□□ 0.86
RANBP3-209ENST00000587411 PDCL3Q9H2J4 239 aa20.4■□□□□ 0.86
RANBP3-209ENST00000587411 OFD1O75665 1012 aa20.4■□□□□ 0.86
RANBP3-209ENST00000587411 RABEP1Q15276 862 aa20.4■□□□□ 0.86
RANBP3-209ENST00000587411 CDC42BPGQ6DT37 1551 aa20.39■□□□□ 0.85
RANBP3-209ENST00000587411 FCHSD2O94868 740 aa20.39■□□□□ 0.85
RANBP3-209ENST00000587411 NUCB2P80303 420 aa20.39■□□□□ 0.85
RANBP3-209ENST00000587411 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.39■□□□□ 0.85
RANBP3-209ENST00000587411 KIAA1211Q6ZU35 1233 aa20.39■□□□□ 0.85
RANBP3-209ENST00000587411 TERF2IPQ9NYB0 399 aa20.39■□□□□ 0.85
RANBP3-209ENST00000587411 ATAD2Q6PL18 1390 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms