RNA–Protein interactions for RNA: ENST00000587368.1

CHAF1A-204, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-204ENST00000587368 TOPAZ1Q8N9V7 1692 aa19.26■□□□□ 0.67
CHAF1A-204ENST00000587368 BRD4O60885 1362 aaPredicted RBP19.25■□□□□ 0.67
CHAF1A-204ENST00000587368 USP47Q96K76 1375 aa19.25■□□□□ 0.67
CHAF1A-204ENST00000587368 PUS7Q96PZ0 661 aaKnown RBP19.25■□□□□ 0.67
CHAF1A-204ENST00000587368 TESK2Q96S53 571 aa19.25■□□□□ 0.67
CHAF1A-204ENST00000587368 USP21Q9UK80 565 aa19.25■□□□□ 0.67
CHAF1A-204ENST00000587368 RXRBP28702 533 aa19.24■□□□□ 0.67
CHAF1A-204ENST00000587368 ABTB2Q8N961 1025 aa19.24■□□□□ 0.67
CHAF1A-204ENST00000587368 QTRT2Q9H974 415 aaKnown RBP19.24■□□□□ 0.67
CHAF1A-204ENST00000587368 TRPM3Q9HCF6 1732 aaPredicted RBP19.24■□□□□ 0.67
CHAF1A-204ENST00000587368 NUTM2GQ5VZR2 741 aa19.21■□□□□ 0.67
CHAF1A-204ENST00000587368 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
CHAF1A-204ENST00000587368 TRPC5Q9UL62 973 aaPredicted RBP19.21■□□□□ 0.67
CHAF1A-204ENST00000587368 ALS2Q96Q42 1657 aa19.2■□□□□ 0.66
CHAF1A-204ENST00000587368 USP6P35125 1406 aa19.2■□□□□ 0.66
CHAF1A-204ENST00000587368 RBM6P78332 1123 aaKnown RBP19.2■□□□□ 0.66
CHAF1A-204ENST00000587368 TMF1P82094 1093 aa19.2■□□□□ 0.66
CHAF1A-204ENST00000587368 NLRP13Q86W25 1043 aa19.2■□□□□ 0.66
CHAF1A-204ENST00000587368 UNC5CLQ8IV45 518 aa19.18■□□□□ 0.66
CHAF1A-204ENST00000587368 FAM83GA6ND36 823 aa19.17■□□□□ 0.66
CHAF1A-204ENST00000587368 CDCA8Q53HL2 280 aa19.17■□□□□ 0.66
CHAF1A-204ENST00000587368 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
CHAF1A-204ENST00000587368 SLC12A5Q9H2X9 1139 aa19.17■□□□□ 0.66
CHAF1A-204ENST00000587368 CPSF1Q10570 1443 aaKnown RBP19.17■□□□□ 0.66
CHAF1A-204ENST00000587368 BCL9LQ86UU0 1499 aa19.16■□□□□ 0.66
CHAF1A-204ENST00000587368 NLRP6P59044 892 aa19.16■□□□□ 0.66
CHAF1A-204ENST00000587368 TERF2IPQ9NYB0 399 aa19.16■□□□□ 0.66
CHAF1A-204ENST00000587368 TTC21BQ7Z4L5 1316 aa19.16■□□□□ 0.66
CHAF1A-204ENST00000587368 KTN1Q86UP2 1357 aaKnown RBP19.16■□□□□ 0.66
CHAF1A-204ENST00000587368 SLIT2O94813 1529 aa19.15■□□□□ 0.66
CHAF1A-204ENST00000587368 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
CHAF1A-204ENST00000587368 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
CHAF1A-204ENST00000587368 SSH2Q76I76 1423 aa19.15■□□□□ 0.66
CHAF1A-204ENST00000587368 MARF1Q9Y4F3 1742 aaKnown RBP19.14■□□□□ 0.66
CHAF1A-204ENST00000587368 EIF4G2P78344 907 aaKnown RBP eCLIP19.14■□□□□ 0.65
CHAF1A-204ENST00000587368 NINLQ9Y2I6 1382 aa19.14■□□□□ 0.65
CHAF1A-204ENST00000587368 ATRNO75882 1429 aa19.14■□□□□ 0.65
CHAF1A-204ENST00000587368 USP19O94966 1318 aa19.13■□□□□ 0.65
CHAF1A-204ENST00000587368 GCP02774 474 aa19.12■□□□□ 0.65
CHAF1A-204ENST00000587368 ZC3H6P61129 1189 aaKnown RBP19.12■□□□□ 0.65
CHAF1A-204ENST00000587368 GJD4Q96KN9 370 aaPredicted RBP19.12■□□□□ 0.65
CHAF1A-204ENST00000587368 BTG4Q9NY30 223 aa19.12■□□□□ 0.65
CHAF1A-204ENST00000587368 ABCA3Q99758 1704 aa19.11■□□□□ 0.65
CHAF1A-204ENST00000587368 CDK12Q9NYV4 1490 aaPredicted RBP19.11■□□□□ 0.65
CHAF1A-204ENST00000587368 KIAA0232Q92628 1395 aa19.11■□□□□ 0.65
CHAF1A-204ENST00000587368 VPS72Q15906 364 aa19.1■□□□□ 0.65
CHAF1A-204ENST00000587368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHAF1A-204ENST00000587368 CCDC9Q9Y3X0 531 aaKnown RBP19.09■□□□□ 0.65
CHAF1A-204ENST00000587368 CD163L1Q9NR16 1453 aa19.09■□□□□ 0.65
CHAF1A-204ENST00000587368 HSPA5P11021 654 aaKnown RBP19.08■□□□□ 0.64
CHAF1A-204ENST00000587368 CHRNA2Q15822 529 aa19.08■□□□□ 0.64
CHAF1A-204ENST00000587368 A0A1W2PP64 1363 aa19.07■□□□□ 0.64
CHAF1A-204ENST00000587368 CPDO75976 1380 aa19.07■□□□□ 0.64
CHAF1A-204ENST00000587368 KCNH5Q8NCM2 988 aa19.07■□□□□ 0.64
CHAF1A-204ENST00000587368 AKAP12Q02952 1782 aa19.06■□□□□ 0.64
CHAF1A-204ENST00000587368 CRYBG1Q9Y4K1 1723 aa19.06■□□□□ 0.64
CHAF1A-204ENST00000587368 EDC4Q6P2E9 1401 aaKnown RBP19.06■□□□□ 0.64
CHAF1A-204ENST00000587368 COL14A1Q05707 1796 aaKnown RBP19.06■□□□□ 0.64
CHAF1A-204ENST00000587368 RGS12O14924 1447 aa19.05■□□□□ 0.64
CHAF1A-204ENST00000587368 NWD2Q9ULI1 1742 aa19.05■□□□□ 0.64
CHAF1A-204ENST00000587368 PHRF1Q9P1Y6 1649 aaKnown RBP19.04■□□□□ 0.64
CHAF1A-204ENST00000587368 EVA1CP58658 441 aa19.04■□□□□ 0.64
CHAF1A-204ENST00000587368 NME9Q86XW9 330 aa19.04■□□□□ 0.64
CHAF1A-204ENST00000587368 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.04■□□□□ 0.64
CHAF1A-204ENST00000587368 ANKRD36BQ8N2N9 1353 aa19.04■□□□□ 0.64
CHAF1A-204ENST00000587368 ZBTB7CA1YPR0 619 aa19.03■□□□□ 0.64
CHAF1A-204ENST00000587368 USP31Q70CQ4 1352 aa19.03■□□□□ 0.64
CHAF1A-204ENST00000587368 MON2Q7Z3U7 1717 aa19.03■□□□□ 0.64
CHAF1A-204ENST00000587368 NRKQ7Z2Y5 1582 aa19.02■□□□□ 0.64
CHAF1A-204ENST00000587368 PIK3C2AO00443 1686 aa19.02■□□□□ 0.64
CHAF1A-204ENST00000587368 PLCH1Q4KWH8 1693 aa19.02■□□□□ 0.64
CHAF1A-204ENST00000587368 SOX12O15370 315 aa19.02■□□□□ 0.64
CHAF1A-204ENST00000587368 STRN4Q9NRL3 753 aa19.02■□□□□ 0.64
CHAF1A-204ENST00000587368 SLIT3O75094 1523 aa19.01■□□□□ 0.63
CHAF1A-204ENST00000587368 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
CHAF1A-204ENST00000587368 POLR3GLQ9BT43 218 aa19■□□□□ 0.63
CHAF1A-204ENST00000587368 AATKQ6ZMQ8 1374 aa19■□□□□ 0.63
CHAF1A-204ENST00000587368 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
CHAF1A-204ENST00000587368 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
CHAF1A-204ENST00000587368 ONECUT3O60422 494 aaPredicted RBP18.99■□□□□ 0.63
CHAF1A-204ENST00000587368 ARHGEF25Q86VW2 580 aa18.99■□□□□ 0.63
CHAF1A-204ENST00000587368 SEPT12Q8IYM1 358 aa18.98■□□□□ 0.63
CHAF1A-204ENST00000587368 GLI3P10071 1580 aa18.98■□□□□ 0.63
CHAF1A-204ENST00000587368 COG3Q96JB2 828 aa18.97■□□□□ 0.63
CHAF1A-204ENST00000587368 CAMTA1Q9Y6Y1 1673 aa18.96■□□□□ 0.63
CHAF1A-204ENST00000587368 A0A0G2JS52 829 aa18.96■□□□□ 0.63
CHAF1A-204ENST00000587368 MYT1Q01538 1121 aa18.96■□□□□ 0.63
CHAF1A-204ENST00000587368 FAM98CQ17RN3 349 aaKnown RBP18.96■□□□□ 0.63
CHAF1A-204ENST00000587368 NRAPQ86VF7 1730 aa18.96■□□□□ 0.63
CHAF1A-204ENST00000587368 SPATA31A1Q5TZJ5 1347 aa18.96■□□□□ 0.63
CHAF1A-204ENST00000587368 LARP1Q6PKG0 1096 aaKnown RBP18.95■□□□□ 0.62
CHAF1A-204ENST00000587368 FYB1O15117 783 aa18.94■□□□□ 0.62
CHAF1A-204ENST00000587368 UPF1Q92900 1129 aaKnown RBP eCLIP18.94■□□□□ 0.62
CHAF1A-204ENST00000587368 OVOS2A0A0J9YW53 1432 aa18.93■□□□□ 0.62
CHAF1A-204ENST00000587368 OVOS2Q6IE36 1432 aa18.93■□□□□ 0.62
CHAF1A-204ENST00000587368 CARD14Q9BXL6 1004 aa18.93■□□□□ 0.62
CHAF1A-204ENST00000587368 USP35Q9P2H5 1018 aa18.93■□□□□ 0.62
CHAF1A-204ENST00000587368 AXIN2Q9Y2T1 843 aa18.93■□□□□ 0.62
CHAF1A-204ENST00000587368 LMO7Q8WWI1 1683 aa18.92■□□□□ 0.62
CHAF1A-204ENST00000587368 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms