RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 GJD4Q96KN9 370 aaPredicted RBP18.94■□□□□ 0.62
H3F3B-205ENST00000587171 PLEKHG3A1L390 1219 aa18.93■□□□□ 0.62
H3F3B-205ENST00000587171 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
H3F3B-205ENST00000587171 RALGAPBQ86X10 1494 aa18.92■□□□□ 0.62
H3F3B-205ENST00000587171 ACEP12821 1306 aa18.92■□□□□ 0.62
H3F3B-205ENST00000587171 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
H3F3B-205ENST00000587171 NRAPQ86VF7 1730 aa18.91■□□□□ 0.62
H3F3B-205ENST00000587171 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
H3F3B-205ENST00000587171 PAK3O75914 559 aaPredicted RBP18.91■□□□□ 0.62
H3F3B-205ENST00000587171 PHRF1Q9P1Y6 1649 aaKnown RBP18.9■□□□□ 0.62
H3F3B-205ENST00000587171 FAM83GA6ND36 823 aa18.9■□□□□ 0.62
H3F3B-205ENST00000587171 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
H3F3B-205ENST00000587171 ATAD2Q6PL18 1390 aa18.9■□□□□ 0.62
H3F3B-205ENST00000587171 NBPF8Q3BBV2 869 aa18.89■□□□□ 0.61
H3F3B-205ENST00000587171 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
H3F3B-205ENST00000587171 VPS72Q15906 364 aa18.88■□□□□ 0.61
H3F3B-205ENST00000587171 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
H3F3B-205ENST00000587171 BRWD3Q6RI45 1802 aa18.88■□□□□ 0.61
H3F3B-205ENST00000587171 TONSLQ96HA7 1378 aa18.85■□□□□ 0.61
H3F3B-205ENST00000587171 EVC2Q86UK5 1308 aa18.84■□□□□ 0.61
H3F3B-205ENST00000587171 BTG4Q9NY30 223 aa18.84■□□□□ 0.61
H3F3B-205ENST00000587171 BRD4O60885 1362 aaPredicted RBP18.82■□□□□ 0.6
H3F3B-205ENST00000587171 NRKQ7Z2Y5 1582 aa18.82■□□□□ 0.6
H3F3B-205ENST00000587171 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
H3F3B-205ENST00000587171 ONECUT3O60422 494 aaPredicted RBP18.81■□□□□ 0.6
H3F3B-205ENST00000587171 NUTM2GQ5VZR2 741 aa18.81■□□□□ 0.6
H3F3B-205ENST00000587171 PRDM11Q9NQV5 511 aa18.81■□□□□ 0.6
H3F3B-205ENST00000587171 CABP1Q9NZU7 370 aa18.81■□□□□ 0.6
H3F3B-205ENST00000587171 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
H3F3B-205ENST00000587171 USP6P35125 1406 aa18.81■□□□□ 0.6
H3F3B-205ENST00000587171 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
H3F3B-205ENST00000587171 USP19O94966 1318 aa18.8■□□□□ 0.6
H3F3B-205ENST00000587171 ABTB2Q8N961 1025 aa18.8■□□□□ 0.6
H3F3B-205ENST00000587171 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
H3F3B-205ENST00000587171 SEPT12Q8IYM1 358 aa18.79■□□□□ 0.6
H3F3B-205ENST00000587171 CARD11Q9BXL7 1154 aa18.79■□□□□ 0.6
H3F3B-205ENST00000587171 SSH2Q76I76 1423 aa18.78■□□□□ 0.6
H3F3B-205ENST00000587171 SRCAPQ6ZRS2 3230 aa18.77■□□□□ 0.6
H3F3B-205ENST00000587171 SPATA31A5Q5VU36 1347 aa18.76■□□□□ 0.59
H3F3B-205ENST00000587171 SPATA31A7Q8IWB4 1347 aa18.76■□□□□ 0.59
H3F3B-205ENST00000587171 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
H3F3B-205ENST00000587171 LMO7Q8WWI1 1683 aa18.76■□□□□ 0.59
H3F3B-205ENST00000587171 ZC3H6P61129 1189 aaKnown RBP18.76■□□□□ 0.59
H3F3B-205ENST00000587171 CHRNA2Q15822 529 aa18.76■□□□□ 0.59
H3F3B-205ENST00000587171 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
H3F3B-205ENST00000587171 CPDO75976 1380 aa18.76■□□□□ 0.59
H3F3B-205ENST00000587171 CCDC125Q86Z20 511 aa18.75■□□□□ 0.59
H3F3B-205ENST00000587171 THSD7AQ9UPZ6 1657 aa18.75■□□□□ 0.59
H3F3B-205ENST00000587171 FAM98CQ17RN3 349 aaKnown RBP18.74■□□□□ 0.59
H3F3B-205ENST00000587171 SLIT3O75094 1523 aa18.74■□□□□ 0.59
H3F3B-205ENST00000587171 GCP02774 474 aa18.73■□□□□ 0.59
H3F3B-205ENST00000587171 MON2Q7Z3U7 1717 aa18.73■□□□□ 0.59
H3F3B-205ENST00000587171 CPSF1Q10570 1443 aaKnown RBP18.73■□□□□ 0.59
H3F3B-205ENST00000587171 CAMTA1Q9Y6Y1 1673 aa18.73■□□□□ 0.59
H3F3B-205ENST00000587171 KRT27Q7Z3Y8 459 aa18.72■□□□□ 0.59
H3F3B-205ENST00000587171 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
H3F3B-205ENST00000587171 BLMP54132 1417 aaPredicted RBP18.72■□□□□ 0.59
H3F3B-205ENST00000587171 SPATA31A1Q5TZJ5 1347 aa18.71■□□□□ 0.59
H3F3B-205ENST00000587171 A0A0G2JS52 829 aa18.7■□□□□ 0.58
H3F3B-205ENST00000587171 NLRP6P59044 892 aa18.7■□□□□ 0.58
H3F3B-205ENST00000587171 MYT1Q01538 1121 aa18.7■□□□□ 0.58
H3F3B-205ENST00000587171 TTC21BQ7Z4L5 1316 aa18.7■□□□□ 0.58
H3F3B-205ENST00000587171 STRN4Q9NRL3 753 aa18.69■□□□□ 0.58
H3F3B-205ENST00000587171 TTC21AQ8NDW8 1320 aa18.68■□□□□ 0.58
H3F3B-205ENST00000587171 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
H3F3B-205ENST00000587171 CD163L1Q9NR16 1453 aa18.67■□□□□ 0.58
H3F3B-205ENST00000587171 COL18A1P39060 1754 aa18.67■□□□□ 0.58
H3F3B-205ENST00000587171 COL5A2P05997 1499 aaPredicted RBP18.66■□□□□ 0.58
H3F3B-205ENST00000587171 USP54Q70EL1 1684 aa18.66■□□□□ 0.58
H3F3B-205ENST00000587171 EVA1CP58658 441 aa18.65■□□□□ 0.58
H3F3B-205ENST00000587171 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
H3F3B-205ENST00000587171 LARP1Q6PKG0 1096 aaKnown RBP18.64■□□□□ 0.57
H3F3B-205ENST00000587171 PUS7Q96PZ0 661 aaKnown RBP18.64■□□□□ 0.57
H3F3B-205ENST00000587171 TESK2Q96S53 571 aa18.64■□□□□ 0.57
H3F3B-205ENST00000587171 BARGINQ6ZT62 677 aa18.63■□□□□ 0.57
H3F3B-205ENST00000587171 NFAT5O94916 1531 aa18.63■□□□□ 0.57
H3F3B-205ENST00000587171 RGPD1P0DJD0 1748 aa18.63■□□□□ 0.57
H3F3B-205ENST00000587171 ST20-MTHFSA0A0A6YYL1 179 aa18.62■□□□□ 0.57
H3F3B-205ENST00000587171 USP35Q9P2H5 1018 aa18.62■□□□□ 0.57
H3F3B-205ENST00000587171 RGPD5Q99666 1765 aa18.62■□□□□ 0.57
H3F3B-205ENST00000587171 CLSPNQ9HAW4 1339 aa18.61■□□□□ 0.57
H3F3B-205ENST00000587171 SF3B2Q13435 895 aaKnown RBP18.61■□□□□ 0.57
H3F3B-205ENST00000587171 TCP11L2Q8N4U5 519 aa18.61■□□□□ 0.57
H3F3B-205ENST00000587171 KCNH5Q8NCM2 988 aa18.61■□□□□ 0.57
H3F3B-205ENST00000587171 TMC1Q8TDI8 760 aa18.61■□□□□ 0.57
H3F3B-205ENST00000587171 SLC12A5Q9H2X9 1139 aa18.61■□□□□ 0.57
H3F3B-205ENST00000587171 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
H3F3B-205ENST00000587171 CRB1P82279 1406 aa18.6■□□□□ 0.57
H3F3B-205ENST00000587171 USP31Q70CQ4 1352 aa18.6■□□□□ 0.57
H3F3B-205ENST00000587171 ZBTB7CA1YPR0 619 aa18.6■□□□□ 0.57
H3F3B-205ENST00000587171 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
H3F3B-205ENST00000587171 DEFB132Q7Z7B7 95 aa18.6■□□□□ 0.57
H3F3B-205ENST00000587171 ARHGEF25Q86VW2 580 aa18.6■□□□□ 0.57
H3F3B-205ENST00000587171 THRAP3Q9Y2W1 955 aaKnown RBP18.6■□□□□ 0.57
H3F3B-205ENST00000587171 TNS1Q9HBL0 1735 aaKnown RBP18.6■□□□□ 0.57
H3F3B-205ENST00000587171 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
H3F3B-205ENST00000587171 A0A1W2PP64 1363 aa18.59■□□□□ 0.57
H3F3B-205ENST00000587171 SLC24A1O60721 1099 aa18.59■□□□□ 0.57
H3F3B-205ENST00000587171 HDGFL2Q7Z4V5 671 aaPredicted RBP18.59■□□□□ 0.57
H3F3B-205ENST00000587171 ABCC6O95255 1503 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms