RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 RGPD8O14715 1765 aaPredicted RBP19.54■□□□□ 0.72
SMARCA4-211ENST00000586921 PDE3BQ13370 1112 aa19.53■□□□□ 0.72
SMARCA4-211ENST00000586921 PLEKHH1Q9ULM0 1364 aa19.53■□□□□ 0.72
SMARCA4-211ENST00000586921 ZBTB7AO95365 584 aa19.52■□□□□ 0.72
SMARCA4-211ENST00000586921 SYT17Q9BSW7 474 aa19.52■□□□□ 0.72
SMARCA4-211ENST00000586921 FHDC1Q9C0D6 1143 aaPredicted RBP19.52■□□□□ 0.72
SMARCA4-211ENST00000586921 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
SMARCA4-211ENST00000586921 IFT172Q9UG01 1749 aa19.51■□□□□ 0.71
SMARCA4-211ENST00000586921 PTGER2P43116 358 aa19.5■□□□□ 0.71
SMARCA4-211ENST00000586921 PRDM11Q9NQV5 511 aa19.5■□□□□ 0.71
SMARCA4-211ENST00000586921 PPLO60437 1756 aa19.49■□□□□ 0.71
SMARCA4-211ENST00000586921 ANO8Q9HCE9 1232 aaPredicted RBP19.49■□□□□ 0.71
SMARCA4-211ENST00000586921 DLC1Q96QB1 1528 aa19.48■□□□□ 0.71
SMARCA4-211ENST00000586921 PDGFDQ9GZP0 370 aaPredicted RBP19.48■□□□□ 0.71
SMARCA4-211ENST00000586921 KNDC1Q76NI1 1749 aa19.48■□□□□ 0.71
SMARCA4-211ENST00000586921 ABCC11Q96J66 1382 aa19.47■□□□□ 0.71
SMARCA4-211ENST00000586921 STRN4Q9NRL3 753 aa19.46■□□□□ 0.71
SMARCA4-211ENST00000586921 USP35Q9P2H5 1018 aa19.46■□□□□ 0.71
SMARCA4-211ENST00000586921 ATF5Q9Y2D1 282 aaPredicted RBP19.46■□□□□ 0.71
SMARCA4-211ENST00000586921 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
SMARCA4-211ENST00000586921 RGPD3A6NKT7 1758 aaPredicted RBP19.45■□□□□ 0.7
SMARCA4-211ENST00000586921 RGPD4Q7Z3J3 1758 aa19.45■□□□□ 0.7
SMARCA4-211ENST00000586921 ALS2Q96Q42 1657 aa19.44■□□□□ 0.7
SMARCA4-211ENST00000586921 BARGINQ6ZT62 677 aa19.43■□□□□ 0.7
SMARCA4-211ENST00000586921 PMFBP1Q8TBY8 1022 aa19.43■□□□□ 0.7
SMARCA4-211ENST00000586921 BCL11BQ9C0K0 894 aaPredicted RBP19.41■□□□□ 0.7
SMARCA4-211ENST00000586921 CRYBG1Q9Y4K1 1723 aa19.41■□□□□ 0.7
SMARCA4-211ENST00000586921 GPR162Q16538 588 aa19.4■□□□□ 0.7
SMARCA4-211ENST00000586921 TMEM132EQ6IEE7 984 aa19.4■□□□□ 0.7
SMARCA4-211ENST00000586921 GPRASP1Q5JY77 1395 aa19.4■□□□□ 0.7
SMARCA4-211ENST00000586921 KIAA0232Q92628 1395 aa19.4■□□□□ 0.7
SMARCA4-211ENST00000586921 C11orf95C9JLR9 678 aaPredicted RBP19.39■□□□□ 0.69
SMARCA4-211ENST00000586921 PLSCR1O15162 318 aa19.39■□□□□ 0.69
SMARCA4-211ENST00000586921 CHRNA2Q15822 529 aa19.39■□□□□ 0.69
SMARCA4-211ENST00000586921 ADGRF5Q8IZF2 1346 aa19.39■□□□□ 0.69
SMARCA4-211ENST00000586921 SHANK3Q9BYB0 1731 aa19.38■□□□□ 0.69
SMARCA4-211ENST00000586921 GOLGB1Q14789 3259 aaKnown RBP19.37■□□□□ 0.69
SMARCA4-211ENST00000586921 YTHDC2Q9H6S0 1430 aaKnown RBP19.37■□□□□ 0.69
SMARCA4-211ENST00000586921 MTFR1LQ9H019 292 aa19.37■□□□□ 0.69
SMARCA4-211ENST00000586921 SSH2Q76I76 1423 aa19.36■□□□□ 0.69
SMARCA4-211ENST00000586921 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
SMARCA4-211ENST00000586921 TCP11L2Q8N4U5 519 aa19.36■□□□□ 0.69
SMARCA4-211ENST00000586921 MAP3K5Q99683 1374 aa19.35■□□□□ 0.69
SMARCA4-211ENST00000586921 EVA1CP58658 441 aa19.35■□□□□ 0.69
SMARCA4-211ENST00000586921 OVOS2A0A0G2JMS6 1433 aa19.34■□□□□ 0.69
SMARCA4-211ENST00000586921 OVOS2A0A0J9YW53 1432 aa19.34■□□□□ 0.69
SMARCA4-211ENST00000586921 OVOS2Q6IE36 1432 aa19.34■□□□□ 0.69
SMARCA4-211ENST00000586921 ARXQ96QS3 562 aa19.34■□□□□ 0.69
SMARCA4-211ENST00000586921 SGIP1Q9BQI5 828 aa19.34■□□□□ 0.69
SMARCA4-211ENST00000586921 ACIN1Q9UKV3 1341 aaKnown RBP19.33■□□□□ 0.69
SMARCA4-211ENST00000586921 PAK3O75914 559 aaPredicted RBP19.33■□□□□ 0.68
SMARCA4-211ENST00000586921 SIRT1Q96EB6 747 aa19.33■□□□□ 0.68
SMARCA4-211ENST00000586921 STK32BQ9NY57 414 aa19.33■□□□□ 0.68
SMARCA4-211ENST00000586921 HSPA6P17066 643 aa19.32■□□□□ 0.68
SMARCA4-211ENST00000586921 ITGAEP38570 1179 aa19.32■□□□□ 0.68
SMARCA4-211ENST00000586921 PARP4Q9UKK3 1724 aaKnown RBP19.31■□□□□ 0.68
SMARCA4-211ENST00000586921 SAFB2Q14151 953 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMARCA4-211ENST00000586921 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
SMARCA4-211ENST00000586921 PEAK1Q9H792 1746 aa19.31■□□□□ 0.68
SMARCA4-211ENST00000586921 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
SMARCA4-211ENST00000586921 ZC3H6P61129 1189 aaKnown RBP19.3■□□□□ 0.68
SMARCA4-211ENST00000586921 SBF2Q86WG5 1849 aa19.3■□□□□ 0.68
SMARCA4-211ENST00000586921 SLC15A2Q16348 729 aa19.29■□□□□ 0.68
SMARCA4-211ENST00000586921 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
SMARCA4-211ENST00000586921 PROM2Q8N271 834 aa19.29■□□□□ 0.68
SMARCA4-211ENST00000586921 THRAP3Q9Y2W1 955 aaKnown RBP19.29■□□□□ 0.68
SMARCA4-211ENST00000586921 PHRF1Q9P1Y6 1649 aaKnown RBP19.29■□□□□ 0.68
SMARCA4-211ENST00000586921 PIK3C2GO75747 1445 aa19.27■□□□□ 0.68
SMARCA4-211ENST00000586921 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
SMARCA4-211ENST00000586921 ANKRD30BQ9BXX2 1392 aa19.27■□□□□ 0.68
SMARCA4-211ENST00000586921 PTF1AQ7RTS3 328 aa19.26■□□□□ 0.67
SMARCA4-211ENST00000586921 DHX57Q6P158 1386 aaKnown RBP19.25■□□□□ 0.67
SMARCA4-211ENST00000586921 NGDNQ8NEJ9 315 aaKnown RBP19.24■□□□□ 0.67
SMARCA4-211ENST00000586921 ATP7BP35670 1465 aa19.23■□□□□ 0.67
SMARCA4-211ENST00000586921 TXNRD1Q16881 649 aa19.23■□□□□ 0.67
SMARCA4-211ENST00000586921 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
SMARCA4-211ENST00000586921 KLHL34Q8N239 644 aa19.23■□□□□ 0.67
SMARCA4-211ENST00000586921 ATP10DQ9P241 1426 aa19.23■□□□□ 0.67
SMARCA4-211ENST00000586921 EIF3AQ14152 1382 aaKnown RBP19.22■□□□□ 0.67
SMARCA4-211ENST00000586921 LRRC37A3O60309 1634 aa19.22■□□□□ 0.67
SMARCA4-211ENST00000586921 CAPN15O75808 1086 aa19.21■□□□□ 0.67
SMARCA4-211ENST00000586921 GPBP1L1Q9HC44 474 aaPredicted RBP19.21■□□□□ 0.67
SMARCA4-211ENST00000586921 POGKQ9P215 609 aa19.21■□□□□ 0.67
SMARCA4-211ENST00000586921 PRR36Q9H6K5 1346 aa19.21■□□□□ 0.67
SMARCA4-211ENST00000586921 NUTM2GQ5VZR2 741 aa19.2■□□□□ 0.66
SMARCA4-211ENST00000586921 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
SMARCA4-211ENST00000586921 DDB1Q16531 1140 aa19.19■□□□□ 0.66
SMARCA4-211ENST00000586921 TULP4Q9NRJ4 1543 aa19.19■□□□□ 0.66
SMARCA4-211ENST00000586921 HIRIP3Q9BW71 556 aaPredicted RBP19.18■□□□□ 0.66
SMARCA4-211ENST00000586921 SPATA31E1Q6ZUB1 1445 aa19.17■□□□□ 0.66
SMARCA4-211ENST00000586921 GRIN3BO60391 1043 aa19.16■□□□□ 0.66
SMARCA4-211ENST00000586921 C14orf93Q9H972 538 aaKnown RBP19.16■□□□□ 0.66
SMARCA4-211ENST00000586921 CPDO75976 1380 aa19.16■□□□□ 0.66
SMARCA4-211ENST00000586921 AATKQ6ZMQ8 1374 aa19.16■□□□□ 0.66
SMARCA4-211ENST00000586921 CRB1P82279 1406 aa19.16■□□□□ 0.66
SMARCA4-211ENST00000586921 COL5A2P05997 1499 aaPredicted RBP19.16■□□□□ 0.66
SMARCA4-211ENST00000586921 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
SMARCA4-211ENST00000586921 BCL9O00512 1426 aa19.14■□□□□ 0.65
SMARCA4-211ENST00000586921 AKAP12Q02952 1782 aa19.12■□□□□ 0.65
SMARCA4-211ENST00000586921 TOPAZ1Q8N9V7 1692 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms