RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 ALS2Q96Q42 1657 aa30.58■■■□□ 2.49
R3HDM4-202ENST00000586080 ST20-MTHFSA0A0A6YYL1 179 aa30.58■■■□□ 2.49
R3HDM4-202ENST00000586080 RXRBP28702 533 aa30.58■■■□□ 2.49
R3HDM4-202ENST00000586080 FNBP4Q8N3X1 1017 aaPredicted RBP30.58■■■□□ 2.49
R3HDM4-202ENST00000586080 NUTM2GQ5VZR2 741 aa30.57■■■□□ 2.48
R3HDM4-202ENST00000586080 USP47Q96K76 1375 aa30.55■■■□□ 2.48
R3HDM4-202ENST00000586080 ABCA3Q99758 1704 aa30.53■■■□□ 2.48
R3HDM4-202ENST00000586080 ABTB2Q8N961 1025 aa30.52■■■□□ 2.48
R3HDM4-202ENST00000586080 TRPC5Q9UL62 973 aaPredicted RBP30.52■■■□□ 2.48
R3HDM4-202ENST00000586080 MARF1Q9Y4F3 1742 aaKnown RBP30.51■■■□□ 2.47
R3HDM4-202ENST00000586080 USP6P35125 1406 aa30.51■■■□□ 2.47
R3HDM4-202ENST00000586080 RBM6P78332 1123 aaKnown RBP30.5■■■□□ 2.47
R3HDM4-202ENST00000586080 TESK2Q96S53 571 aa30.5■■■□□ 2.47
R3HDM4-202ENST00000586080 TMC1Q8TDI8 760 aa30.49■■■□□ 2.47
R3HDM4-202ENST00000586080 BCL9LQ86UU0 1499 aa30.49■■■□□ 2.47
R3HDM4-202ENST00000586080 BRD4O60885 1362 aaPredicted RBP30.47■■■□□ 2.47
R3HDM4-202ENST00000586080 SLIT2O94813 1529 aa30.47■■■□□ 2.47
R3HDM4-202ENST00000586080 ATRNO75882 1429 aa30.47■■■□□ 2.47
R3HDM4-202ENST00000586080 UNC5CLQ8IV45 518 aa30.46■■■□□ 2.47
R3HDM4-202ENST00000586080 ZNF692Q9BU19 519 aaPredicted RBP30.45■■■□□ 2.47
R3HDM4-202ENST00000586080 FAM83GA6ND36 823 aa30.44■■■□□ 2.46
R3HDM4-202ENST00000586080 SLC24A1O60721 1099 aa30.44■■■□□ 2.46
R3HDM4-202ENST00000586080 NLRP13Q86W25 1043 aa30.43■■■□□ 2.46
R3HDM4-202ENST00000586080 PRDM11Q9NQV5 511 aa30.43■■■□□ 2.46
R3HDM4-202ENST00000586080 KTN1Q86UP2 1357 aaKnown RBP30.42■■■□□ 2.46
R3HDM4-202ENST00000586080 CDK12Q9NYV4 1490 aaPredicted RBP30.41■■■□□ 2.46
R3HDM4-202ENST00000586080 RGS12O14924 1447 aa30.4■■■□□ 2.46
R3HDM4-202ENST00000586080 CRYBG1Q9Y4K1 1723 aa30.4■■■□□ 2.46
R3HDM4-202ENST00000586080 NLRP6P59044 892 aa30.4■■■□□ 2.46
R3HDM4-202ENST00000586080 ZC3H6P61129 1189 aaKnown RBP30.4■■■□□ 2.46
R3HDM4-202ENST00000586080 TMF1P82094 1093 aa30.4■■■□□ 2.46
R3HDM4-202ENST00000586080 SLC12A5Q9H2X9 1139 aa30.4■■■□□ 2.46
R3HDM4-202ENST00000586080 TTC21BQ7Z4L5 1316 aa30.4■■■□□ 2.46
R3HDM4-202ENST00000586080 KIAA0232Q92628 1395 aa30.4■■■□□ 2.46
R3HDM4-202ENST00000586080 CPSF1Q10570 1443 aaKnown RBP30.39■■■□□ 2.46
R3HDM4-202ENST00000586080 SSH2Q76I76 1423 aa30.39■■■□□ 2.46
R3HDM4-202ENST00000586080 HDGFL2Q7Z4V5 671 aaPredicted RBP30.39■■■□□ 2.46
R3HDM4-202ENST00000586080 PUS7Q96PZ0 661 aaKnown RBP30.39■■■□□ 2.46
R3HDM4-202ENST00000586080 CCDC9Q9Y3X0 531 aaKnown RBP30.39■■■□□ 2.46
R3HDM4-202ENST00000586080 USP19O94966 1318 aa30.39■■■□□ 2.46
R3HDM4-202ENST00000586080 PHRF1Q9P1Y6 1649 aaKnown RBP30.39■■■□□ 2.46
R3HDM4-202ENST00000586080 BTG4Q9NY30 223 aa30.38■■■□□ 2.45
R3HDM4-202ENST00000586080 PLCH1Q4KWH8 1693 aa30.38■■■□□ 2.45
R3HDM4-202ENST00000586080 GJD4Q96KN9 370 aaPredicted RBP30.37■■■□□ 2.45
R3HDM4-202ENST00000586080 CHRNA2Q15822 529 aa30.36■■■□□ 2.45
R3HDM4-202ENST00000586080 TERF2IPQ9NYB0 399 aa30.35■■■□□ 2.45
R3HDM4-202ENST00000586080 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.35■■■□□ 2.45
R3HDM4-202ENST00000586080 AKAP12Q02952 1782 aa30.34■■■□□ 2.45
R3HDM4-202ENST00000586080 COL14A1Q05707 1796 aaKnown RBP30.34■■■□□ 2.45
R3HDM4-202ENST00000586080 NRKQ7Z2Y5 1582 aa30.34■■■□□ 2.45
R3HDM4-202ENST00000586080 TTC21AQ8NDW8 1320 aa30.34■■■□□ 2.45
R3HDM4-202ENST00000586080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.34■■■□□ 2.45
R3HDM4-202ENST00000586080 CD163L1Q9NR16 1453 aa30.33■■■□□ 2.45
R3HDM4-202ENST00000586080 GCP02774 474 aa30.33■■■□□ 2.45
R3HDM4-202ENST00000586080 VPS72Q15906 364 aa30.33■■■□□ 2.45
R3HDM4-202ENST00000586080 ZBTB7CA1YPR0 619 aa30.32■■■□□ 2.44
R3HDM4-202ENST00000586080 NWD2Q9ULI1 1742 aa30.32■■■□□ 2.44
R3HDM4-202ENST00000586080 A0A1W2PP64 1363 aa30.31■■■□□ 2.44
R3HDM4-202ENST00000586080 NINLQ9Y2I6 1382 aa30.31■■■□□ 2.44
R3HDM4-202ENST00000586080 PIK3C2AO00443 1686 aa30.31■■■□□ 2.44
R3HDM4-202ENST00000586080 CDCA8Q53HL2 280 aa30.29■■■□□ 2.44
R3HDM4-202ENST00000586080 SOX12O15370 315 aa30.28■■■□□ 2.44
R3HDM4-202ENST00000586080 MON2Q7Z3U7 1717 aa30.27■■■□□ 2.44
R3HDM4-202ENST00000586080 EIF4G2P78344 907 aaKnown RBP eCLIP30.27■■■□□ 2.44
R3HDM4-202ENST00000586080 GLI3P10071 1580 aa30.27■■■□□ 2.44
R3HDM4-202ENST00000586080 CPDO75976 1380 aa30.27■■■□□ 2.44
R3HDM4-202ENST00000586080 EDC4Q6P2E9 1401 aaKnown RBP30.26■■■□□ 2.43
R3HDM4-202ENST00000586080 STRN4Q9NRL3 753 aa30.26■■■□□ 2.43
R3HDM4-202ENST00000586080 SLIT3O75094 1523 aa30.26■■■□□ 2.43
R3HDM4-202ENST00000586080 NME9Q86XW9 330 aa30.25■■■□□ 2.43
R3HDM4-202ENST00000586080 NRAPQ86VF7 1730 aa30.25■■■□□ 2.43
R3HDM4-202ENST00000586080 ZRANB1Q9UGI0 708 aa30.24■■■□□ 2.43
R3HDM4-202ENST00000586080 HSPA5P11021 654 aaKnown RBP30.23■■■□□ 2.43
R3HDM4-202ENST00000586080 A0A0G2JS52 829 aa30.22■■■□□ 2.43
R3HDM4-202ENST00000586080 MYT1Q01538 1121 aa30.22■■■□□ 2.43
R3HDM4-202ENST00000586080 EVA1CP58658 441 aa30.21■■■□□ 2.43
R3HDM4-202ENST00000586080 KCNH5Q8NCM2 988 aa30.21■■■□□ 2.43
R3HDM4-202ENST00000586080 POLR3GLQ9BT43 218 aa30.21■■■□□ 2.43
R3HDM4-202ENST00000586080 ANKRD36BQ8N2N9 1353 aa30.2■■■□□ 2.43
R3HDM4-202ENST00000586080 FAM98CQ17RN3 349 aaKnown RBP30.18■■■□□ 2.42
R3HDM4-202ENST00000586080 SPATA31A5Q5VU36 1347 aa30.18■■■□□ 2.42
R3HDM4-202ENST00000586080 SPATA31A7Q8IWB4 1347 aa30.18■■■□□ 2.42
R3HDM4-202ENST00000586080 USP31Q70CQ4 1352 aa30.17■■■□□ 2.42
R3HDM4-202ENST00000586080 SEPT12Q8IYM1 358 aa30.17■■■□□ 2.42
R3HDM4-202ENST00000586080 CAMTA1Q9Y6Y1 1673 aa30.16■■■□□ 2.42
R3HDM4-202ENST00000586080 UPF1Q92900 1129 aaKnown RBP eCLIP30.15■■■□□ 2.421e-14■□□□□ 9.2
R3HDM4-202ENST00000586080 AATKQ6ZMQ8 1374 aa30.14■■■□□ 2.41
R3HDM4-202ENST00000586080 USP35Q9P2H5 1018 aa30.13■■■□□ 2.41
R3HDM4-202ENST00000586080 LMO7Q8WWI1 1683 aa30.13■■■□□ 2.41
R3HDM4-202ENST00000586080 LARP1Q6PKG0 1096 aaKnown RBP30.12■■■□□ 2.41
R3HDM4-202ENST00000586080 ARHGEF25Q86VW2 580 aa30.12■■■□□ 2.41
R3HDM4-202ENST00000586080 SPATA31A1Q5TZJ5 1347 aa30.11■■■□□ 2.41
R3HDM4-202ENST00000586080 COL5A2P05997 1499 aaPredicted RBP30.11■■■□□ 2.41
R3HDM4-202ENST00000586080 NFAT5O94916 1531 aa30.11■■■□□ 2.41
R3HDM4-202ENST00000586080 OVOS2A0A0J9YW53 1432 aa30.09■■■□□ 2.41
R3HDM4-202ENST00000586080 ONECUT3O60422 494 aaPredicted RBP30.09■■■□□ 2.41
R3HDM4-202ENST00000586080 OVOS2Q6IE36 1432 aa30.09■■■□□ 2.41
R3HDM4-202ENST00000586080 COG3Q96JB2 828 aa30.08■■■□□ 2.41
R3HDM4-202ENST00000586080 AXIN2Q9Y2T1 843 aa30.06■■■□□ 2.4
R3HDM4-202ENST00000586080 USP54Q70EL1 1684 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms