RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 SLIT2O94813 1529 aa26.7■■□□□ 1.87
ATG4D-203ENST00000585752 TRPM1Q7Z4N2 1603 aa26.68■■□□□ 1.86
ATG4D-203ENST00000585752 ROCK2O75116 1388 aaKnown RBP26.68■■□□□ 1.86
ATG4D-203ENST00000585752 TOPAZ1Q8N9V7 1692 aa26.66■■□□□ 1.86
ATG4D-203ENST00000585752 ACEP12821 1306 aa26.66■■□□□ 1.86
ATG4D-203ENST00000585752 FAM83GA6ND36 823 aa26.65■■□□□ 1.86
ATG4D-203ENST00000585752 NBPF8Q3BBV2 869 aa26.65■■□□□ 1.86
ATG4D-203ENST00000585752 CCER1Q8TC90 406 aaPredicted RBP26.65■■□□□ 1.86
ATG4D-203ENST00000585752 VPS72Q15906 364 aa26.64■■□□□ 1.86
ATG4D-203ENST00000585752 CABP2Q9NPB3 220 aa26.64■■□□□ 1.86
ATG4D-203ENST00000585752 COL14A1Q05707 1796 aaKnown RBP26.63■■□□□ 1.85
ATG4D-203ENST00000585752 RALGAPBQ86X10 1494 aa26.63■■□□□ 1.85
ATG4D-203ENST00000585752 TONSLQ96HA7 1378 aa26.63■■□□□ 1.85
ATG4D-203ENST00000585752 PLEKHG3A1L390 1219 aa26.63■■□□□ 1.85
ATG4D-203ENST00000585752 EVC2Q86UK5 1308 aa26.63■■□□□ 1.85
ATG4D-203ENST00000585752 A0A0G2JS52 829 aa26.62■■□□□ 1.85
ATG4D-203ENST00000585752 MYT1Q01538 1121 aa26.62■■□□□ 1.85
ATG4D-203ENST00000585752 BTG4Q9NY30 223 aa26.62■■□□□ 1.85
ATG4D-203ENST00000585752 PPIP5K1Q6PFW1 1433 aa26.62■■□□□ 1.85
ATG4D-203ENST00000585752 PRDM11Q9NQV5 511 aa26.61■■□□□ 1.85
ATG4D-203ENST00000585752 POLR3AO14802 1390 aaPredicted RBP26.6■■□□□ 1.85
ATG4D-203ENST00000585752 GLI3P10071 1580 aa26.6■■□□□ 1.85
ATG4D-203ENST00000585752 ABTB2Q8N961 1025 aa26.6■■□□□ 1.85
ATG4D-203ENST00000585752 NUTM2GQ5VZR2 741 aa26.59■■□□□ 1.85
ATG4D-203ENST00000585752 CLSPNQ9HAW4 1339 aa26.59■■□□□ 1.85
ATG4D-203ENST00000585752 CRYBG1Q9Y4K1 1723 aa26.56■■□□□ 1.84
ATG4D-203ENST00000585752 BRWD3Q6RI45 1802 aa26.55■■□□□ 1.84
ATG4D-203ENST00000585752 PHRF1Q9P1Y6 1649 aaKnown RBP26.55■■□□□ 1.84
ATG4D-203ENST00000585752 CCDC125Q86Z20 511 aa26.55■■□□□ 1.84
ATG4D-203ENST00000585752 SEPT12Q8IYM1 358 aa26.55■■□□□ 1.84
ATG4D-203ENST00000585752 NRAPQ86VF7 1730 aa26.54■■□□□ 1.84
ATG4D-203ENST00000585752 NLRP13Q86W25 1043 aa26.54■■□□□ 1.84
ATG4D-203ENST00000585752 CABP1Q9NZU7 370 aa26.54■■□□□ 1.84
ATG4D-203ENST00000585752 CARD11Q9BXL7 1154 aa26.53■■□□□ 1.84
ATG4D-203ENST00000585752 ZC3H6P61129 1189 aaKnown RBP26.52■■□□□ 1.84
ATG4D-203ENST00000585752 BRD4O60885 1362 aaPredicted RBP26.51■■□□□ 1.83
ATG4D-203ENST00000585752 KIAA0232Q92628 1395 aa26.5■■□□□ 1.83
ATG4D-203ENST00000585752 EVA1CP58658 441 aa26.5■■□□□ 1.83
ATG4D-203ENST00000585752 SF3B2Q13435 895 aaKnown RBP26.5■■□□□ 1.83
ATG4D-203ENST00000585752 STRN4Q9NRL3 753 aa26.49■■□□□ 1.83
ATG4D-203ENST00000585752 CHRNA2Q15822 529 aa26.48■■□□□ 1.83
ATG4D-203ENST00000585752 FAM98CQ17RN3 349 aaKnown RBP26.48■■□□□ 1.83
ATG4D-203ENST00000585752 KRT27Q7Z3Y8 459 aa26.48■■□□□ 1.83
ATG4D-203ENST00000585752 ONECUT3O60422 494 aaPredicted RBP26.46■■□□□ 1.83
ATG4D-203ENST00000585752 NLRP6P59044 892 aa26.45■■□□□ 1.82
ATG4D-203ENST00000585752 ZNF692Q9BU19 519 aaPredicted RBP26.45■■□□□ 1.82
ATG4D-203ENST00000585752 SPATA31A5Q5VU36 1347 aa26.43■■□□□ 1.82
ATG4D-203ENST00000585752 SPATA31A7Q8IWB4 1347 aa26.43■■□□□ 1.82
ATG4D-203ENST00000585752 USP6P35125 1406 aa26.43■■□□□ 1.82
ATG4D-203ENST00000585752 ZBTB7CA1YPR0 619 aa26.43■■□□□ 1.82
ATG4D-203ENST00000585752 NRKQ7Z2Y5 1582 aa26.41■■□□□ 1.82
ATG4D-203ENST00000585752 AKAP12Q02952 1782 aa26.41■■□□□ 1.82
ATG4D-203ENST00000585752 GCP02774 474 aa26.4■■□□□ 1.82
ATG4D-203ENST00000585752 BLMP54132 1417 aaPredicted RBP26.39■■□□□ 1.82
ATG4D-203ENST00000585752 USP35Q9P2H5 1018 aa26.39■■□□□ 1.82
ATG4D-203ENST00000585752 USP19O94966 1318 aa26.39■■□□□ 1.81
ATG4D-203ENST00000585752 TIMELESSQ9UNS1 1208 aa26.38■■□□□ 1.81
ATG4D-203ENST00000585752 CPDO75976 1380 aa26.37■■□□□ 1.81
ATG4D-203ENST00000585752 TMC1Q8TDI8 760 aa26.37■■□□□ 1.81
ATG4D-203ENST00000585752 ZRANB1Q9UGI0 708 aa26.37■■□□□ 1.81
ATG4D-203ENST00000585752 SPATA31A1Q5TZJ5 1347 aa26.37■■□□□ 1.81
ATG4D-203ENST00000585752 SBNO2Q9Y2G9 1366 aa26.36■■□□□ 1.81
ATG4D-203ENST00000585752 KTN1Q86UP2 1357 aaKnown RBP26.35■■□□□ 1.81
ATG4D-203ENST00000585752 TTC21AQ8NDW8 1320 aa26.34■■□□□ 1.81
ATG4D-203ENST00000585752 EP400Q96L91 3159 aa26.33■■□□□ 1.81
ATG4D-203ENST00000585752 SLC24A1O60721 1099 aa26.33■■□□□ 1.81
ATG4D-203ENST00000585752 KCNH5Q8NCM2 988 aa26.33■■□□□ 1.81
ATG4D-203ENST00000585752 TTC21BQ7Z4L5 1316 aa26.33■■□□□ 1.81
ATG4D-203ENST00000585752 SSH2Q76I76 1423 aa26.32■■□□□ 1.8
ATG4D-203ENST00000585752 HDGFL2Q7Z4V5 671 aaPredicted RBP26.32■■□□□ 1.8
ATG4D-203ENST00000585752 PIK3C2AO00443 1686 aa26.31■■□□□ 1.8
ATG4D-203ENST00000585752 CAMTA1Q9Y6Y1 1673 aa26.31■■□□□ 1.8
ATG4D-203ENST00000585752 BAG6P46379 1132 aa26.3■■□□□ 1.8
ATG4D-203ENST00000585752 LARP1Q6PKG0 1096 aaKnown RBP26.3■■□□□ 1.8
ATG4D-203ENST00000585752 LMO7Q8WWI1 1683 aa26.29■■□□□ 1.8
ATG4D-203ENST00000585752 THSD7AQ9UPZ6 1657 aa26.29■■□□□ 1.8
ATG4D-203ENST00000585752 SOX12O15370 315 aa26.29■■□□□ 1.8
ATG4D-203ENST00000585752 PDE3BQ13370 1112 aa26.29■■□□□ 1.8
ATG4D-203ENST00000585752 MON2Q7Z3U7 1717 aa26.28■■□□□ 1.8
ATG4D-203ENST00000585752 DEFB132Q7Z7B7 95 aa26.28■■□□□ 1.8
ATG4D-203ENST00000585752 TCP11L2Q8N4U5 519 aa26.28■■□□□ 1.8
ATG4D-203ENST00000585752 SLIT3O75094 1523 aa26.28■■□□□ 1.8
ATG4D-203ENST00000585752 RGPD1P0DJD0 1748 aa26.28■■□□□ 1.8
ATG4D-203ENST00000585752 BARGINQ6ZT62 677 aa26.27■■□□□ 1.8
ATG4D-203ENST00000585752 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.27■■□□□ 1.8
ATG4D-203ENST00000585752 TERF2IPQ9NYB0 399 aa26.27■■□□□ 1.8
ATG4D-203ENST00000585752 THRAP3Q9Y2W1 955 aaKnown RBP26.27■■□□□ 1.8
ATG4D-203ENST00000585752 CPSF1Q10570 1443 aaKnown RBP26.26■■□□□ 1.79
ATG4D-203ENST00000585752 FAM182BQ5T319 152 aa26.26■■□□□ 1.79
ATG4D-203ENST00000585752 AATKQ6ZMQ8 1374 aa26.25■■□□□ 1.79
ATG4D-203ENST00000585752 ST20-MTHFSA0A0A6YYL1 179 aa26.24■■□□□ 1.79
ATG4D-203ENST00000585752 FAM196AQ6ZSG2 479 aa26.24■■□□□ 1.79
ATG4D-203ENST00000585752 TOM1L2Q6ZVM7 507 aa26.24■■□□□ 1.79
ATG4D-203ENST00000585752 COL5A2P05997 1499 aaPredicted RBP26.23■■□□□ 1.79
ATG4D-203ENST00000585752 PUS7Q96PZ0 661 aaKnown RBP26.23■■□□□ 1.79
ATG4D-203ENST00000585752 SLC12A5Q9H2X9 1139 aa26.22■■□□□ 1.79
ATG4D-203ENST00000585752 RGPD5Q99666 1765 aa26.22■■□□□ 1.79
ATG4D-203ENST00000585752 CRB1P82279 1406 aa26.22■■□□□ 1.79
ATG4D-203ENST00000585752 CSB-PGBD3P0DP91 1061 aa26.21■■□□□ 1.79
ATG4D-203ENST00000585752 ARHGEF25Q86VW2 580 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms