RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 SEPT12Q8IYM1 358 aa23.76■■□□□ 1.39
LSM12-202ENST00000585388 NUDT16Q96DE0 195 aaKnown RBP23.76■■□□□ 1.39
LSM12-202ENST00000585388 PHRF1Q9P1Y6 1649 aaKnown RBP23.75■■□□□ 1.39
LSM12-202ENST00000585388 PAK3O75914 559 aaPredicted RBP23.75■■□□□ 1.39
LSM12-202ENST00000585388 ONECUT3O60422 494 aaPredicted RBP23.73■■□□□ 1.39
LSM12-202ENST00000585388 BTG4Q9NY30 223 aa23.73■■□□□ 1.39
LSM12-202ENST00000585388 ZRANB1Q9UGI0 708 aa23.73■■□□□ 1.39
LSM12-202ENST00000585388 CDK19Q9BWU1 502 aa23.72■■□□□ 1.39
LSM12-202ENST00000585388 POLR3AO14802 1390 aaPredicted RBP23.71■■□□□ 1.39
LSM12-202ENST00000585388 A0A0G2JS52 829 aa23.7■■□□□ 1.38
LSM12-202ENST00000585388 MYT1Q01538 1121 aa23.7■■□□□ 1.38
LSM12-202ENST00000585388 KRT27Q7Z3Y8 459 aa23.69■■□□□ 1.38
LSM12-202ENST00000585388 PRDM11Q9NQV5 511 aa23.69■■□□□ 1.38
LSM12-202ENST00000585388 QRICH2Q9H0J4 1663 aa23.69■■□□□ 1.38
LSM12-202ENST00000585388 SF3B2Q13435 895 aaKnown RBP23.68■■□□□ 1.38
LSM12-202ENST00000585388 CCDC61Q9Y6R9 512 aa23.68■■□□□ 1.38
LSM12-202ENST00000585388 ACEP12821 1306 aa23.66■■□□□ 1.38
LSM12-202ENST00000585388 FAM98CQ17RN3 349 aaKnown RBP23.66■■□□□ 1.38
LSM12-202ENST00000585388 NBPF1Q3BBV0 1214 aa23.66■■□□□ 1.38
LSM12-202ENST00000585388 CENPJQ9HC77 1338 aaPredicted RBP23.65■■□□□ 1.38
LSM12-202ENST00000585388 THSD7AQ9UPZ6 1657 aa23.65■■□□□ 1.38
LSM12-202ENST00000585388 NRKQ7Z2Y5 1582 aa23.65■■□□□ 1.38
LSM12-202ENST00000585388 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
LSM12-202ENST00000585388 SPATA31A5Q5VU36 1347 aa23.64■■□□□ 1.38
LSM12-202ENST00000585388 SPATA31A7Q8IWB4 1347 aa23.64■■□□□ 1.38
LSM12-202ENST00000585388 PLEKHG3A1L390 1219 aa23.64■■□□□ 1.37
LSM12-202ENST00000585388 NBPF8Q3BBV2 869 aa23.63■■□□□ 1.37
LSM12-202ENST00000585388 TRPM1Q7Z4N2 1603 aa23.62■■□□□ 1.37
LSM12-202ENST00000585388 RGPD1P0DJD0 1748 aa23.62■■□□□ 1.37
LSM12-202ENST00000585388 PPIP5K1Q6PFW1 1433 aa23.61■■□□□ 1.37
LSM12-202ENST00000585388 SRPK2P78362 688 aaKnown RBP23.61■■□□□ 1.37
LSM12-202ENST00000585388 SRCAPQ6ZRS2 3230 aa23.59■■□□□ 1.37
LSM12-202ENST00000585388 DEFB132Q7Z7B7 95 aa23.59■■□□□ 1.37
LSM12-202ENST00000585388 BRD4O60885 1362 aaPredicted RBP23.59■■□□□ 1.37
LSM12-202ENST00000585388 NUTM2GQ5VZR2 741 aa23.58■■□□□ 1.37
LSM12-202ENST00000585388 ZC3H6P61129 1189 aaKnown RBP23.57■■□□□ 1.36
LSM12-202ENST00000585388 CHRNA2Q15822 529 aa23.57■■□□□ 1.36
LSM12-202ENST00000585388 ABTB2Q8N961 1025 aa23.57■■□□□ 1.36
LSM12-202ENST00000585388 L3MBTL2Q969R5 705 aa23.57■■□□□ 1.36
LSM12-202ENST00000585388 USP19O94966 1318 aa23.57■■□□□ 1.36
LSM12-202ENST00000585388 BAG6P46379 1132 aa23.56■■□□□ 1.36
LSM12-202ENST00000585388 LMO7Q8WWI1 1683 aa23.56■■□□□ 1.36
LSM12-202ENST00000585388 SPATA31A1Q5TZJ5 1347 aa23.56■■□□□ 1.36
LSM12-202ENST00000585388 CPDO75976 1380 aa23.55■■□□□ 1.36
LSM12-202ENST00000585388 STRN4Q9NRL3 753 aa23.55■■□□□ 1.36
LSM12-202ENST00000585388 SSH2Q76I76 1423 aa23.54■■□□□ 1.36
LSM12-202ENST00000585388 CABP2Q9NPB3 220 aa23.54■■□□□ 1.36
LSM12-202ENST00000585388 NLRP13Q86W25 1043 aa23.53■■□□□ 1.36
LSM12-202ENST00000585388 TNS1Q9HBL0 1735 aaKnown RBP23.53■■□□□ 1.36
LSM12-202ENST00000585388 USP6P35125 1406 aa23.52■■□□□ 1.36
LSM12-202ENST00000585388 CAMTA1Q9Y6Y1 1673 aa23.51■■□□□ 1.35
LSM12-202ENST00000585388 ROCK2O75116 1388 aaKnown RBP23.51■■□□□ 1.35
LSM12-202ENST00000585388 EVA1CP58658 441 aa23.5■■□□□ 1.35
LSM12-202ENST00000585388 EVC2Q86UK5 1308 aa23.5■■□□□ 1.35
LSM12-202ENST00000585388 SIN3AQ96ST3 1273 aa23.49■■□□□ 1.35
LSM12-202ENST00000585388 DISP2A7MBM2 1401 aa23.48■■□□□ 1.35
LSM12-202ENST00000585388 SLIT3O75094 1523 aa23.48■■□□□ 1.35
LSM12-202ENST00000585388 GCP02774 474 aa23.47■■□□□ 1.35
LSM12-202ENST00000585388 FAM182BQ5T319 152 aa23.47■■□□□ 1.35
LSM12-202ENST00000585388 CABP1Q9NZU7 370 aa23.47■■□□□ 1.35
LSM12-202ENST00000585388 LRP5O75197 1615 aa23.47■■□□□ 1.35
LSM12-202ENST00000585388 PIK3C2AO00443 1686 aa23.47■■□□□ 1.35
LSM12-202ENST00000585388 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
LSM12-202ENST00000585388 BARGINQ6ZT62 677 aa23.46■■□□□ 1.35
LSM12-202ENST00000585388 USP35Q9P2H5 1018 aa23.46■■□□□ 1.35
LSM12-202ENST00000585388 COL5A2P05997 1499 aaPredicted RBP23.45■■□□□ 1.34
LSM12-202ENST00000585388 AKAP12Q02952 1782 aa23.45■■□□□ 1.34
LSM12-202ENST00000585388 FAM196AQ6ZSG2 479 aa23.44■■□□□ 1.34
LSM12-202ENST00000585388 PARP4Q9UKK3 1724 aaKnown RBP23.43■■□□□ 1.34
LSM12-202ENST00000585388 NLRP6P59044 892 aa23.43■■□□□ 1.34
LSM12-202ENST00000585388 LARP1Q6PKG0 1096 aaKnown RBP23.43■■□□□ 1.34
LSM12-202ENST00000585388 TCP11L2Q8N4U5 519 aa23.42■■□□□ 1.34
LSM12-202ENST00000585388 THRAP3Q9Y2W1 955 aaKnown RBP23.42■■□□□ 1.34
LSM12-202ENST00000585388 EN1Q05925 392 aaPredicted RBP23.41■■□□□ 1.34
LSM12-202ENST00000585388 CRB1P82279 1406 aa23.41■■□□□ 1.34
LSM12-202ENST00000585388 PDE3BQ13370 1112 aa23.4■■□□□ 1.34
LSM12-202ENST00000585388 AATKQ6ZMQ8 1374 aa23.4■■□□□ 1.34
LSM12-202ENST00000585388 SBNO2Q9Y2G9 1366 aa23.39■■□□□ 1.33
LSM12-202ENST00000585388 ZNF692Q9BU19 519 aaPredicted RBP23.38■■□□□ 1.33
LSM12-202ENST00000585388 PARD3Q8TEW0 1356 aa23.38■■□□□ 1.33
LSM12-202ENST00000585388 ZBTB7CA1YPR0 619 aa23.37■■□□□ 1.33
LSM12-202ENST00000585388 TRIM37O94972 964 aa23.37■■□□□ 1.33
LSM12-202ENST00000585388 COL18A1P39060 1754 aa23.37■■□□□ 1.33
LSM12-202ENST00000585388 MON2Q7Z3U7 1717 aa23.36■■□□□ 1.33
LSM12-202ENST00000585388 PSDA5PKW4 1024 aaPredicted RBP23.36■■□□□ 1.33
LSM12-202ENST00000585388 WNK3Q9BYP7 1800 aa23.36■■□□□ 1.33
LSM12-202ENST00000585388 TTC21AQ8NDW8 1320 aa23.35■■□□□ 1.33
LSM12-202ENST00000585388 RREB1Q92766 1687 aa23.35■■□□□ 1.33
LSM12-202ENST00000585388 CPSF1Q10570 1443 aaKnown RBP23.35■■□□□ 1.33
LSM12-202ENST00000585388 TTC21BQ7Z4L5 1316 aa23.34■■□□□ 1.33
LSM12-202ENST00000585388 LRRC37A3O60309 1634 aa23.34■■□□□ 1.33
LSM12-202ENST00000585388 C11orf95C9JLR9 678 aaPredicted RBP23.33■■□□□ 1.33
LSM12-202ENST00000585388 EZH2Q15910 746 aaKnown RBP23.33■■□□□ 1.33
LSM12-202ENST00000585388 KCNH5Q8NCM2 988 aa23.33■■□□□ 1.33
LSM12-202ENST00000585388 KTN1Q86UP2 1357 aaKnown RBP23.32■■□□□ 1.32
LSM12-202ENST00000585388 APBA3O96018 575 aa23.32■■□□□ 1.32
LSM12-202ENST00000585388 TONSLQ96HA7 1378 aa23.31■■□□□ 1.32
LSM12-202ENST00000585388 CAMKK2Q96RR4 588 aa23.31■■□□□ 1.32
LSM12-202ENST00000585388 CARD11Q9BXL7 1154 aa23.31■■□□□ 1.32
LSM12-202ENST00000585388 ABCC6O95255 1503 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms