RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 PLPP6Q8IY26 295 aa8.27□□□□□ -1.09
MSI2-219ENST00000584476 RYDENQ9NUL5 291 aaKnown RBP8.27□□□□□ -1.09
MSI2-219ENST00000584476 SLC52A1Q9NWF4 448 aa8.27□□□□□ -1.09
MSI2-219ENST00000584476 SPATA31D1Q6ZQQ2 1576 aa8.27□□□□□ -1.09
MSI2-219ENST00000584476 CEBPAP49715 358 aaPredicted RBP8.26□□□□□ -1.09
MSI2-219ENST00000584476 NBPF1Q3BBV0 1214 aa8.26□□□□□ -1.09
MSI2-219ENST00000584476 KIF1BO60333 1816 aa8.26□□□□□ -1.09
MSI2-219ENST00000584476 ARHGAP33O14559 1287 aa8.25□□□□□ -1.09
MSI2-219ENST00000584476 TBC1D12O60347 775 aa8.25□□□□□ -1.09
MSI2-219ENST00000584476 EIF4G2P78344 907 aaKnown RBP eCLIP8.25□□□□□ -1.09
MSI2-219ENST00000584476 AXIN2Q9Y2T1 843 aa8.25□□□□□ -1.09
MSI2-219ENST00000584476 ADGRF5Q8IZF2 1346 aa8.25□□□□□ -1.09
MSI2-219ENST00000584476 TRPM1Q7Z4N2 1603 aa8.25□□□□□ -1.09
MSI2-219ENST00000584476 MADDQ8WXG6 1647 aa8.25□□□□□ -1.09
MSI2-219ENST00000584476 DSG2Q14126 1118 aa8.24□□□□□ -1.09
MSI2-219ENST00000584476 BBXQ8WY36 941 aaPredicted RBP8.24□□□□□ -1.09
MSI2-219ENST00000584476 MYOM2P54296 1465 aa8.24□□□□□ -1.09
MSI2-219ENST00000584476 ROCK2O75116 1388 aaKnown RBP8.23□□□□□ -1.09
MSI2-219ENST00000584476 TNRQ92752 1358 aa8.23□□□□□ -1.09
MSI2-219ENST00000584476 TMEM131LA2VDJ0 1609 aa8.23□□□□□ -1.09
MSI2-219ENST00000584476 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
MSI2-219ENST00000584476 NUTM2DQ5VT03 806 aaPredicted RBP8.23□□□□□ -1.09
MSI2-219ENST00000584476 DIEXFQ68CQ4 756 aaKnown RBP8.23□□□□□ -1.09
MSI2-219ENST00000584476 STAC3Q96MF2 364 aa8.23□□□□□ -1.09
MSI2-219ENST00000584476 CARD11Q9BXL7 1154 aa8.23□□□□□ -1.09
MSI2-219ENST00000584476 NRXN1Q9ULB1 1477 aa8.23□□□□□ -1.09
MSI2-219ENST00000584476 RPGRIP1LQ68CZ1 1315 aa8.23□□□□□ -1.09
MSI2-219ENST00000584476 IFT172Q9UG01 1749 aa8.23□□□□□ -1.09
MSI2-219ENST00000584476 GPRASP1Q5JY77 1395 aa8.22□□□□□ -1.09
MSI2-219ENST00000584476 USP47Q96K76 1375 aa8.22□□□□□ -1.09
MSI2-219ENST00000584476 NKX1-1Q15270 411 aaPredicted RBP8.22□□□□□ -1.09
MSI2-219ENST00000584476 NEXMIFQ5QGS0 1516 aa8.22□□□□□ -1.09
MSI2-219ENST00000584476 FER1L4A9Z1Z3 1794 aa8.22□□□□□ -1.09
MSI2-219ENST00000584476 A2ML1A8K2U0 1454 aa8.21□□□□□ -1.09
MSI2-219ENST00000584476 PPLO60437 1756 aa8.21□□□□□ -1.1
MSI2-219ENST00000584476 C11orf95C9JLR9 678 aaPredicted RBP8.21□□□□□ -1.1
MSI2-219ENST00000584476 CFAP70Q5T0N1 1121 aa8.21□□□□□ -1.1
MSI2-219ENST00000584476 C3P01024 1663 aa8.21□□□□□ -1.1
MSI2-219ENST00000584476 ADAMTSL3P82987 1691 aa8.21□□□□□ -1.1
MSI2-219ENST00000584476 PIK3C2GO75747 1445 aa8.2□□□□□ -1.1
MSI2-219ENST00000584476 TK2O00142 265 aa8.2□□□□□ -1.1
MSI2-219ENST00000584476 ADGRD1Q6QNK2 874 aa8.2□□□□□ -1.1
MSI2-219ENST00000584476 RIMS1Q86UR5 1692 aaKnown RBP8.2□□□□□ -1.1
MSI2-219ENST00000584476 MYO5BQ9ULV0 1848 aa8.19□□□□□ -1.1
MSI2-219ENST00000584476 ST20-MTHFSA0A0A6YYL1 179 aa8.19□□□□□ -1.1
MSI2-219ENST00000584476 PPP4R3BQ5MIZ7 849 aa8.19□□□□□ -1.1
MSI2-219ENST00000584476 WASHC2AQ641Q2 1341 aa8.19□□□□□ -1.1
MSI2-219ENST00000584476 ZFYVE9O95405 1425 aa8.19□□□□□ -1.1
MSI2-219ENST00000584476 RIMS2Q9UQ26 1411 aa8.19□□□□□ -1.1
MSI2-219ENST00000584476 LAMC1P11047 1609 aa8.18□□□□□ -1.1
MSI2-219ENST00000584476 HAP1P54257 671 aaPredicted RBP8.18□□□□□ -1.1
MSI2-219ENST00000584476 DDX10Q13206 875 aaKnown RBP8.18□□□□□ -1.1
MSI2-219ENST00000584476 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
MSI2-219ENST00000584476 CFAP44Q96MT7 982 aa8.18□□□□□ -1.1
MSI2-219ENST00000584476 CRISPLD2Q9H0B8 497 aa8.18□□□□□ -1.1
MSI2-219ENST00000584476 C14orf93Q9H972 538 aaKnown RBP8.18□□□□□ -1.1
MSI2-219ENST00000584476 NLRP1Q9C000 1473 aa8.18□□□□□ -1.1
MSI2-219ENST00000584476 KIAA1210Q9ULL0 1709 aa8.17□□□□□ -1.1
MSI2-219ENST00000584476 PAXIP1Q6ZW49 1069 aaPredicted RBP8.17□□□□□ -1.1
MSI2-219ENST00000584476 CCDC7Q96M83 1385 aa8.17□□□□□ -1.1
MSI2-219ENST00000584476 SCAF11Q99590 1463 aaKnown RBP8.17□□□□□ -1.1
MSI2-219ENST00000584476 ADGRB1O14514 1584 aa8.16□□□□□ -1.1
MSI2-219ENST00000584476 IQGAP1P46940 1657 aa8.16□□□□□ -1.1
MSI2-219ENST00000584476 KIF7Q2M1P5 1343 aa8.16□□□□□ -1.1
MSI2-219ENST00000584476 TMEM132EQ6IEE7 984 aa8.16□□□□□ -1.1
MSI2-219ENST00000584476 UBR1Q8IWV7 1749 aa8.16□□□□□ -1.1
MSI2-219ENST00000584476 HCSTQ9UBK5 93 aa8.16□□□□□ -1.1
MSI2-219ENST00000584476 SETBP1Q9Y6X0 1596 aa8.15□□□□□ -1.1
MSI2-219ENST00000584476 ASXL1Q8IXJ9 1541 aa8.15□□□□□ -1.1
MSI2-219ENST00000584476 TMEM2Q9UHN6 1383 aa8.15□□□□□ -1.1
MSI2-219ENST00000584476 HRO43593 1189 aa8.15□□□□□ -1.1
MSI2-219ENST00000584476 PSEN2P49810 448 aa8.15□□□□□ -1.1
MSI2-219ENST00000584476 DMRTA1Q5VZB9 504 aa8.15□□□□□ -1.1
MSI2-219ENST00000584476 TESK2Q96S53 571 aa8.15□□□□□ -1.1
MSI2-219ENST00000584476 MYO3AQ8NEV4 1616 aa8.14□□□□□ -1.11
MSI2-219ENST00000584476 PDE4AP27815 886 aa8.14□□□□□ -1.11
MSI2-219ENST00000584476 PPP1R15BQ5SWA1 713 aa8.14□□□□□ -1.11
MSI2-219ENST00000584476 SPRYD3Q8NCJ5 442 aa8.14□□□□□ -1.11
MSI2-219ENST00000584476 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.14□□□□□ -1.11
MSI2-219ENST00000584476 KDM5AP29375 1690 aaKnown RBP8.14□□□□□ -1.11
MSI2-219ENST00000584476 PTPRMP28827 1452 aa8.13□□□□□ -1.11
MSI2-219ENST00000584476 DISP3Q9P2K9 1392 aa8.13□□□□□ -1.11
MSI2-219ENST00000584476 LTKP29376 864 aa8.13□□□□□ -1.11
MSI2-219ENST00000584476 POLR3GLQ9BT43 218 aa8.13□□□□□ -1.11
MSI2-219ENST00000584476 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
MSI2-219ENST00000584476 ALKQ9UM73 1620 aa8.13□□□□□ -1.11
MSI2-219ENST00000584476 ARHGAP23Q9P227 1491 aa8.13□□□□□ -1.11
MSI2-219ENST00000584476 HDGFP51858 240 aaKnown RBP8.12□□□□□ -1.11
MSI2-219ENST00000584476 TXNDC2Q86VQ3 553 aa8.12□□□□□ -1.11
MSI2-219ENST00000584476 CEP170BQ9Y4F5 1589 aaPredicted RBP8.12□□□□□ -1.11
MSI2-219ENST00000584476 EIF3AQ14152 1382 aaKnown RBP8.11□□□□□ -1.11
MSI2-219ENST00000584476 NRXN3Q9Y4C0 1643 aa8.11□□□□□ -1.11
MSI2-219ENST00000584476 NCKAP5LQ9HCH0 1330 aa8.11□□□□□ -1.11
MSI2-219ENST00000584476 GTPBP6O43824 516 aaPredicted RBP8.11□□□□□ -1.11
MSI2-219ENST00000584476 THEMISQ8N1K5 641 aaPredicted RBP8.11□□□□□ -1.11
MSI2-219ENST00000584476 UPF1Q92900 1129 aaKnown RBP eCLIP8.11□□□□□ -1.11
MSI2-219ENST00000584476 STK26Q9P289 416 aa8.11□□□□□ -1.11
MSI2-219ENST00000584476 SLIT1O75093 1534 aa8.11□□□□□ -1.11
MSI2-219ENST00000584476 PLEKHG1Q9ULL1 1385 aa8.1□□□□□ -1.11
MSI2-219ENST00000584476 CENPJQ9HC77 1338 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms