RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 SLC24A1O60721 1099 aa22.42■■□□□ 1.18
CSNK1D-223ENST00000584472 NGDNQ8NEJ9 315 aaKnown RBP22.42■■□□□ 1.18
CSNK1D-223ENST00000584472 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.42■■□□□ 1.18
CSNK1D-223ENST00000584472 PPIP5K1Q6PFW1 1433 aa22.41■■□□□ 1.18
CSNK1D-223ENST00000584472 ST20-MTHFSA0A0A6YYL1 179 aa22.41■■□□□ 1.18
CSNK1D-223ENST00000584472 HSPA5P11021 654 aaKnown RBP22.41■■□□□ 1.18
CSNK1D-223ENST00000584472 BCL9LQ86UU0 1499 aa22.41■■□□□ 1.18
CSNK1D-223ENST00000584472 RGS12O14924 1447 aa22.4■■□□□ 1.18
CSNK1D-223ENST00000584472 ATAD2Q6PL18 1390 aa22.39■■□□□ 1.18
CSNK1D-223ENST00000584472 TESK2Q96S53 571 aa22.39■■□□□ 1.17
CSNK1D-223ENST00000584472 SLIT2O94813 1529 aa22.39■■□□□ 1.17
CSNK1D-223ENST00000584472 ALS2Q96Q42 1657 aa22.38■■□□□ 1.17
CSNK1D-223ENST00000584472 ACEP12821 1306 aa22.37■■□□□ 1.17
CSNK1D-223ENST00000584472 UPF1Q92900 1129 aaKnown RBP eCLIP22.36■■□□□ 1.174e-6■□□□□ 10.4
CSNK1D-223ENST00000584472 PUS7Q96PZ0 661 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-223ENST00000584472 ABCA3Q99758 1704 aa22.35■■□□□ 1.17
CSNK1D-223ENST00000584472 BRD4O60885 1362 aaPredicted RBP22.34■■□□□ 1.17
CSNK1D-223ENST00000584472 CABP1Q9NZU7 370 aa22.33■■□□□ 1.17
CSNK1D-223ENST00000584472 NWD2Q9ULI1 1742 aa22.33■■□□□ 1.17
CSNK1D-223ENST00000584472 UNC5CLQ8IV45 518 aa22.31■■□□□ 1.16
CSNK1D-223ENST00000584472 AKAP12Q02952 1782 aa22.3■■□□□ 1.16
CSNK1D-223ENST00000584472 GJD4Q96KN9 370 aaPredicted RBP22.3■■□□□ 1.16
CSNK1D-223ENST00000584472 USP6P35125 1406 aa22.3■■□□□ 1.16
CSNK1D-223ENST00000584472 LMOD2Q6P5Q4 547 aa22.29■■□□□ 1.16
CSNK1D-223ENST00000584472 NINLQ9Y2I6 1382 aa22.28■■□□□ 1.16
CSNK1D-223ENST00000584472 PAK3O75914 559 aaPredicted RBP22.28■■□□□ 1.16
CSNK1D-223ENST00000584472 HAP1P54257 671 aaPredicted RBP22.28■■□□□ 1.16
CSNK1D-223ENST00000584472 TMF1P82094 1093 aa22.28■■□□□ 1.16
CSNK1D-223ENST00000584472 CPSF1Q10570 1443 aaKnown RBP22.27■■□□□ 1.16
CSNK1D-223ENST00000584472 ZNF692Q9BU19 519 aaPredicted RBP22.27■■□□□ 1.16
CSNK1D-223ENST00000584472 CRYBG1Q9Y4K1 1723 aa22.26■■□□□ 1.15
CSNK1D-223ENST00000584472 PLCH1Q4KWH8 1693 aa22.26■■□□□ 1.15
CSNK1D-223ENST00000584472 MON2Q7Z3U7 1717 aa22.26■■□□□ 1.15
CSNK1D-223ENST00000584472 SSH2Q76I76 1423 aa22.25■■□□□ 1.15
CSNK1D-223ENST00000584472 EP400Q96L91 3159 aa22.25■■□□□ 1.15
CSNK1D-223ENST00000584472 CDCA8Q53HL2 280 aa22.25■■□□□ 1.15
CSNK1D-223ENST00000584472 NRKQ7Z2Y5 1582 aa22.25■■□□□ 1.15
CSNK1D-223ENST00000584472 VPS72Q15906 364 aa22.24■■□□□ 1.15
CSNK1D-223ENST00000584472 GLI3P10071 1580 aa22.24■■□□□ 1.15
CSNK1D-223ENST00000584472 CD163L1Q9NR16 1453 aa22.23■■□□□ 1.15
CSNK1D-223ENST00000584472 CABLES1Q8TDN4 633 aa22.23■■□□□ 1.15
CSNK1D-223ENST00000584472 COL14A1Q05707 1796 aaKnown RBP22.22■■□□□ 1.15
CSNK1D-223ENST00000584472 KTN1Q86UP2 1357 aaKnown RBP22.22■■□□□ 1.15
CSNK1D-223ENST00000584472 C11orf95C9JLR9 678 aaPredicted RBP22.21■■□□□ 1.15
CSNK1D-223ENST00000584472 TMC1Q8TDI8 760 aa22.21■■□□□ 1.15
CSNK1D-223ENST00000584472 PHRF1Q9P1Y6 1649 aaKnown RBP22.2■■□□□ 1.15
CSNK1D-223ENST00000584472 ONECUT3O60422 494 aaPredicted RBP22.2■■□□□ 1.14
CSNK1D-223ENST00000584472 ABTB2Q8N961 1025 aa22.2■■□□□ 1.14
CSNK1D-223ENST00000584472 SLC12A5Q9H2X9 1139 aa22.2■■□□□ 1.14
CSNK1D-223ENST00000584472 TERF2IPQ9NYB0 399 aa22.2■■□□□ 1.14
CSNK1D-223ENST00000584472 PIK3C2AO00443 1686 aa22.2■■□□□ 1.14
CSNK1D-223ENST00000584472 FAM83GA6ND36 823 aa22.19■■□□□ 1.14
CSNK1D-223ENST00000584472 HDGFL2Q7Z4V5 671 aaPredicted RBP22.19■■□□□ 1.14
CSNK1D-223ENST00000584472 CCDC125Q86Z20 511 aa22.19■■□□□ 1.14
CSNK1D-223ENST00000584472 NRAPQ86VF7 1730 aa22.19■■□□□ 1.14
CSNK1D-223ENST00000584472 USP19O94966 1318 aa22.18■■□□□ 1.14
CSNK1D-223ENST00000584472 TTC21AQ8NDW8 1320 aa22.18■■□□□ 1.14
CSNK1D-223ENST00000584472 EDC4Q6P2E9 1401 aaKnown RBP22.17■■□□□ 1.14
CSNK1D-223ENST00000584472 A0A1W2PP64 1363 aa22.17■■□□□ 1.14
CSNK1D-223ENST00000584472 TTC21BQ7Z4L5 1316 aa22.17■■□□□ 1.14
CSNK1D-223ENST00000584472 NLRP13Q86W25 1043 aa22.16■■□□□ 1.14
CSNK1D-223ENST00000584472 KIF7Q2M1P5 1343 aa22.15■■□□□ 1.14
CSNK1D-223ENST00000584472 MYOM1P52179 1685 aa22.15■■□□□ 1.14
CSNK1D-223ENST00000584472 ZNF316A6NFI3 1004 aaPredicted RBP22.15■■□□□ 1.14
CSNK1D-223ENST00000584472 PLEKHG5O94827 1062 aa22.15■■□□□ 1.14
CSNK1D-223ENST00000584472 NUTM2GQ5VZR2 741 aa22.15■■□□□ 1.14
CSNK1D-223ENST00000584472 ANKRD36BQ8N2N9 1353 aa22.14■■□□□ 1.14
CSNK1D-223ENST00000584472 CCDC7Q96M83 1385 aa22.14■■□□□ 1.14
CSNK1D-223ENST00000584472 WASHC2AQ641Q2 1341 aa22.14■■□□□ 1.14
CSNK1D-223ENST00000584472 USP54Q70EL1 1684 aa22.14■■□□□ 1.13
CSNK1D-223ENST00000584472 SLIT3O75094 1523 aa22.13■■□□□ 1.13
CSNK1D-223ENST00000584472 BTG4Q9NY30 223 aa22.12■■□□□ 1.13
CSNK1D-223ENST00000584472 NLRP6P59044 892 aa22.11■■□□□ 1.13
CSNK1D-223ENST00000584472 CPDO75976 1380 aa22.11■■□□□ 1.13
CSNK1D-223ENST00000584472 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
CSNK1D-223ENST00000584472 PRDM11Q9NQV5 511 aa22.1■■□□□ 1.13
CSNK1D-223ENST00000584472 USP31Q70CQ4 1352 aa22.09■■□□□ 1.13
CSNK1D-223ENST00000584472 KIAA0232Q92628 1395 aa22.09■■□□□ 1.13
CSNK1D-223ENST00000584472 SEPT12Q8IYM1 358 aa22.08■■□□□ 1.13
CSNK1D-223ENST00000584472 BLMP54132 1417 aaPredicted RBP22.07■■□□□ 1.12
CSNK1D-223ENST00000584472 GCP02774 474 aa22.07■■□□□ 1.12
CSNK1D-223ENST00000584472 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.07■■□□□ 1.12
CSNK1D-223ENST00000584472 BRWD3Q6RI45 1802 aa22.07■■□□□ 1.12
CSNK1D-223ENST00000584472 SPATA31A5Q5VU36 1347 aa22.06■■□□□ 1.12
CSNK1D-223ENST00000584472 SPATA31A7Q8IWB4 1347 aa22.06■■□□□ 1.12
CSNK1D-223ENST00000584472 CCDC9Q9Y3X0 531 aaKnown RBP22.06■■□□□ 1.12
CSNK1D-223ENST00000584472 ZC3H6P61129 1189 aaKnown RBP22.04■■□□□ 1.12
CSNK1D-223ENST00000584472 NME9Q86XW9 330 aa22.04■■□□□ 1.12
CSNK1D-223ENST00000584472 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
CSNK1D-223ENST00000584472 NFAT5O94916 1531 aa22.04■■□□□ 1.12
CSNK1D-223ENST00000584472 THSD7AQ9UPZ6 1657 aa22.04■■□□□ 1.12
CSNK1D-223ENST00000584472 KRT27Q7Z3Y8 459 aa22.03■■□□□ 1.12
CSNK1D-223ENST00000584472 LMO7Q8WWI1 1683 aa22.03■■□□□ 1.12
CSNK1D-223ENST00000584472 OVOS2A0A0J9YW53 1432 aa22.03■■□□□ 1.12
CSNK1D-223ENST00000584472 OVOS2Q6IE36 1432 aa22.03■■□□□ 1.12
CSNK1D-223ENST00000584472 SPATA31A1Q5TZJ5 1347 aa22.01■■□□□ 1.11
CSNK1D-223ENST00000584472 KIF20BQ96Q89 1820 aa21.99■■□□□ 1.11
CSNK1D-223ENST00000584472 CHRNA2Q15822 529 aa21.99■■□□□ 1.11
CSNK1D-223ENST00000584472 ZRANB1Q9UGI0 708 aa21.99■■□□□ 1.11
CSNK1D-223ENST00000584472 ABCC6O95255 1503 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms