RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 EPS15P42566 896 aa15.56■□□□□ 0.08
RNF43-208ENST00000584437 WASHC4Q2M389 1173 aa15.56■□□□□ 0.08
RNF43-208ENST00000584437 ANKRD1Q15327 319 aa15.55■□□□□ 0.08
RNF43-208ENST00000584437 VPS37DQ86XT2 251 aa15.55■□□□□ 0.08
RNF43-208ENST00000584437 TRIM34Q9BYJ4 488 aa15.55■□□□□ 0.08
RNF43-208ENST00000584437 TNMDQ9H2S6 317 aa15.55■□□□□ 0.08
RNF43-208ENST00000584437 HMOX1P09601 288 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 PDIA4P13667 645 aaKnown RBP15.54■□□□□ 0.08
RNF43-208ENST00000584437 KRT85P78386 507 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 STK38Q15208 465 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 SURF6O75683 361 aaKnown RBP15.54■□□□□ 0.08
RNF43-208ENST00000584437 SART3Q15020 963 aaKnown RBP15.54■□□□□ 0.08
RNF43-208ENST00000584437 NEUROD6Q96NK8 337 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 MTHFSP49914 203 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 ERC1Q8IUD2 1116 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 EXOSC9Q06265 439 aaKnown RBP15.54■□□□□ 0.08
RNF43-208ENST00000584437 ODF2Q5BJF6 829 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 FMNL2Q96PY5 1086 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 LRRC9Q6ZRR7 1453 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 CCDC30Q5VVM6 783 aa15.54■□□□□ 0.08
RNF43-208ENST00000584437 KIAA0754O94854 1291 aa15.53■□□□□ 0.08
RNF43-208ENST00000584437 USP8P40818 1118 aa15.53■□□□□ 0.08
RNF43-208ENST00000584437 TTLL5Q6EMB2 1281 aa15.53■□□□□ 0.08
RNF43-208ENST00000584437 DACH1Q9UI36 760 aa15.53■□□□□ 0.08
RNF43-208ENST00000584437 RIC3Q7Z5B4 369 aa15.53■□□□□ 0.08
RNF43-208ENST00000584437 CYP46A1Q9Y6A2 500 aa15.53■□□□□ 0.08
RNF43-208ENST00000584437 MAGEC2Q9UBF1 373 aaPredicted RBP15.53■□□□□ 0.08
RNF43-208ENST00000584437 CCDC43Q96MW1 224 aaKnown RBP15.53■□□□□ 0.08
RNF43-208ENST00000584437 PNISRQ8TF01 805 aaKnown RBP15.52■□□□□ 0.08
RNF43-208ENST00000584437 CBFA2T2O43439 604 aa15.52■□□□□ 0.08
RNF43-208ENST00000584437 ZNHIT6Q9NWK9 470 aaKnown RBP15.52■□□□□ 0.08
RNF43-208ENST00000584437 SERPINC1P01008 464 aa15.52■□□□□ 0.07
RNF43-208ENST00000584437 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.07
RNF43-208ENST00000584437 HSP90AB2PQ58FF8 381 aa15.52■□□□□ 0.07
RNF43-208ENST00000584437 GNAI2P04899 355 aa15.52■□□□□ 0.07
RNF43-208ENST00000584437 TXLNAP40222 546 aa15.52■□□□□ 0.07
RNF43-208ENST00000584437 GGNBP2Q9H3C7 697 aa15.52■□□□□ 0.07
RNF43-208ENST00000584437 WDR63Q8IWG1 891 aa15.51■□□□□ 0.07
RNF43-208ENST00000584437 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
RNF43-208ENST00000584437 KIF21BO75037 1637 aa15.51■□□□□ 0.07
RNF43-208ENST00000584437 TXLNBQ8N3L3 684 aa15.51■□□□□ 0.07
RNF43-208ENST00000584437 GOLGA6L10A6NI86 522 aa15.51■□□□□ 0.07
RNF43-208ENST00000584437 ERLIN2O94905 339 aa15.51■□□□□ 0.07
RNF43-208ENST00000584437 PPFIBP1Q86W92 1011 aa15.5■□□□□ 0.07
RNF43-208ENST00000584437 LUC7LQ9NQ29 371 aaKnown RBP15.5■□□□□ 0.07
RNF43-208ENST00000584437 CTDP1Q9Y5B0 961 aaPredicted RBP15.5■□□□□ 0.07
RNF43-208ENST00000584437 TWISTNBQ3B726 338 aaPredicted RBP15.5■□□□□ 0.07
RNF43-208ENST00000584437 RAD21O60216 631 aa15.5■□□□□ 0.07
RNF43-208ENST00000584437 MVPQ14764 893 aaKnown RBP15.5■□□□□ 0.07
RNF43-208ENST00000584437 FYCO1Q9BQS8 1478 aa15.49■□□□□ 0.07
RNF43-208ENST00000584437 GOLGA6L7A0A1B0GV03 622 aa15.49■□□□□ 0.07
RNF43-208ENST00000584437 BCAR3O75815 825 aa15.49■□□□□ 0.07
RNF43-208ENST00000584437 NOB1Q9ULX3 412 aaKnown RBP15.49■□□□□ 0.07
RNF43-208ENST00000584437 PTPRGP23470 1445 aa15.49■□□□□ 0.07
RNF43-208ENST00000584437 KIF2AO00139 706 aaPredicted RBP15.49■□□□□ 0.07
RNF43-208ENST00000584437 RRBP1Q9P2E9 1410 aaKnown RBP15.49■□□□□ 0.07
RNF43-208ENST00000584437 SRCIN1Q9C0H9 1055 aa15.49■□□□□ 0.07
RNF43-208ENST00000584437 ZSCAN31Q96LW9 406 aaPredicted RBP15.49■□□□□ 0.07
RNF43-208ENST00000584437 CHD1LQ86WJ1 897 aa15.48■□□□□ 0.07
RNF43-208ENST00000584437 GAS2L2Q8NHY3 880 aa15.48■□□□□ 0.07
RNF43-208ENST00000584437 ATF7IPQ6VMQ6 1270 aa15.48■□□□□ 0.07
RNF43-208ENST00000584437 TBC1D2BQ9UPU7 963 aa15.48■□□□□ 0.07
RNF43-208ENST00000584437 CEP57L1Q8IYX8 460 aa15.48■□□□□ 0.07
RNF43-208ENST00000584437 CCT4P50991 539 aaKnown RBP15.47■□□□□ 0.07
RNF43-208ENST00000584437 LRRCC1Q9C099 1032 aa15.47■□□□□ 0.07
RNF43-208ENST00000584437 NUP62CLQ9H1M0 184 aa15.47■□□□□ 0.07
RNF43-208ENST00000584437 EVA1CP58658 441 aa15.46■□□□□ 0.07
RNF43-208ENST00000584437 LARP1BQ659C4 914 aaKnown RBP15.46■□□□□ 0.07
RNF43-208ENST00000584437 IQCEQ6IPM2 695 aa15.46■□□□□ 0.07
RNF43-208ENST00000584437 CFAP45Q9UL16 551 aa15.46■□□□□ 0.07
RNF43-208ENST00000584437 ME1P48163 572 aa15.46■□□□□ 0.07
RNF43-208ENST00000584437 BRPF1P55201 1214 aaPredicted RBP15.46■□□□□ 0.07
RNF43-208ENST00000584437 PRKAR2BP31323 418 aa15.45■□□□□ 0.06
RNF43-208ENST00000584437 RAPGEF4Q8WZA2 1011 aa15.45■□□□□ 0.06
RNF43-208ENST00000584437 ZNF428Q96B54 188 aa15.45■□□□□ 0.06
RNF43-208ENST00000584437 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
RNF43-208ENST00000584437 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
RNF43-208ENST00000584437 CCDC181Q5TID7 509 aa15.45■□□□□ 0.06
RNF43-208ENST00000584437 DEF6Q9H4E7 631 aa15.45■□□□□ 0.06
RNF43-208ENST00000584437 CEBPZQ03701 1054 aaKnown RBP15.44■□□□□ 0.06
RNF43-208ENST00000584437 STIM1Q13586 685 aa15.44■□□□□ 0.06
RNF43-208ENST00000584437 HSP90AB3PQ58FF7 597 aa15.44■□□□□ 0.06
RNF43-208ENST00000584437 AIMP1Q12904 312 aaKnown RBP15.44■□□□□ 0.06
RNF43-208ENST00000584437 SPATA32Q96LK8 384 aa15.44■□□□□ 0.06
RNF43-208ENST00000584437 ZRSR2Q15696 482 aaKnown RBP15.44■□□□□ 0.06
RNF43-208ENST00000584437 ZFYVE27Q5T4F4 411 aa15.44■□□□□ 0.06
RNF43-208ENST00000584437 UBXN4Q92575 508 aa15.44■□□□□ 0.06
RNF43-208ENST00000584437 CASKIN1Q8WXD9 1431 aa15.44■□□□□ 0.06
RNF43-208ENST00000584437 NCOA2Q15596 1464 aa15.44■□□□□ 0.06
RNF43-208ENST00000584437 HFM1A2PYH4 1435 aa15.43■□□□□ 0.06
RNF43-208ENST00000584437 PODXL2Q9NZ53 605 aa15.43■□□□□ 0.06
RNF43-208ENST00000584437 SMTNL1A8MU46 457 aa15.43■□□□□ 0.06
RNF43-208ENST00000584437 DNAJC2Q99543 621 aaKnown RBP15.43■□□□□ 0.06
RNF43-208ENST00000584437 ATP2B1P20020 1258 aa15.43■□□□□ 0.06
RNF43-208ENST00000584437 GBP3Q9H0R5 595 aa15.43■□□□□ 0.06
RNF43-208ENST00000584437 IGF1RP08069 1367 aa15.43■□□□□ 0.06
RNF43-208ENST00000584437 PSME1Q06323 249 aa15.43■□□□□ 0.06
RNF43-208ENST00000584437 CDK5RAP3Q96JB5 506 aa15.43■□□□□ 0.06
RNF43-208ENST00000584437 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
RNF43-208ENST00000584437 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms