RNA–Protein interactions for RNA: ENST00000584313.5

CLTC-213, Transcript of clathrin heavy chain, humanhuman

TSL 3

Gene CLTC, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-213ENST00000584313 CABP1Q9NZU7 370 aa20.39■□□□□ 0.85
CLTC-213ENST00000584313 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
CLTC-213ENST00000584313 SBNO2Q9Y2G9 1366 aa20.37■□□□□ 0.85
CLTC-213ENST00000584313 ALS2Q96Q42 1657 aa20.37■□□□□ 0.85
CLTC-213ENST00000584313 ATRNO75882 1429 aa20.36■□□□□ 0.85
CLTC-213ENST00000584313 UNC5CLQ8IV45 518 aa20.35■□□□□ 0.85
CLTC-213ENST00000584313 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
CLTC-213ENST00000584313 SLIT2O94813 1529 aa20.35■□□□□ 0.85
CLTC-213ENST00000584313 FAM83GA6ND36 823 aa20.34■□□□□ 0.85
CLTC-213ENST00000584313 MARF1Q9Y4F3 1742 aaKnown RBP20.33■□□□□ 0.85
CLTC-213ENST00000584313 NUTM2GQ5VZR2 741 aa20.33■□□□□ 0.85
CLTC-213ENST00000584313 ABTB2Q8N961 1025 aa20.32■□□□□ 0.84
CLTC-213ENST00000584313 ATAD2Q6PL18 1390 aa20.32■□□□□ 0.84
CLTC-213ENST00000584313 ABCA3Q99758 1704 aa20.31■□□□□ 0.84
CLTC-213ENST00000584313 RGS12O14924 1447 aa20.31■□□□□ 0.84
CLTC-213ENST00000584313 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
CLTC-213ENST00000584313 BRD4O60885 1362 aaPredicted RBP20.31■□□□□ 0.84
CLTC-213ENST00000584313 GJD4Q96KN9 370 aaPredicted RBP20.3■□□□□ 0.84
CLTC-213ENST00000584313 USP6P35125 1406 aa20.29■□□□□ 0.84
CLTC-213ENST00000584313 ST20-MTHFSA0A0A6YYL1 179 aa20.29■□□□□ 0.84
CLTC-213ENST00000584313 PRDM11Q9NQV5 511 aa20.28■□□□□ 0.84
CLTC-213ENST00000584313 VPS72Q15906 364 aa20.27■□□□□ 0.84
CLTC-213ENST00000584313 TESK2Q96S53 571 aa20.27■□□□□ 0.84
CLTC-213ENST00000584313 ZNF692Q9BU19 519 aaPredicted RBP20.27■□□□□ 0.84
CLTC-213ENST00000584313 BTG4Q9NY30 223 aa20.27■□□□□ 0.84
CLTC-213ENST00000584313 KIAA0232Q92628 1395 aa20.26■□□□□ 0.83
CLTC-213ENST00000584313 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
CLTC-213ENST00000584313 SSH2Q76I76 1423 aa20.26■□□□□ 0.83
CLTC-213ENST00000584313 USP19O94966 1318 aa20.26■□□□□ 0.83
CLTC-213ENST00000584313 ZC3H6P61129 1189 aaKnown RBP20.25■□□□□ 0.83
CLTC-213ENST00000584313 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.24■□□□□ 0.83
CLTC-213ENST00000584313 CRYBG1Q9Y4K1 1723 aa20.24■□□□□ 0.83
CLTC-213ENST00000584313 USP47Q96K76 1375 aa20.24■□□□□ 0.83
CLTC-213ENST00000584313 PUS7Q96PZ0 661 aaKnown RBP20.24■□□□□ 0.83
CLTC-213ENST00000584313 CPSF1Q10570 1443 aaKnown RBP20.24■□□□□ 0.83
CLTC-213ENST00000584313 SLC24A1O60721 1099 aa20.23■□□□□ 0.83
CLTC-213ENST00000584313 NLRP6P59044 892 aa20.23■□□□□ 0.83
CLTC-213ENST00000584313 CHRNA2Q15822 529 aa20.23■□□□□ 0.83
CLTC-213ENST00000584313 TMC1Q8TDI8 760 aa20.23■□□□□ 0.83
CLTC-213ENST00000584313 CCDC9Q9Y3X0 531 aaKnown RBP20.23■□□□□ 0.83
CLTC-213ENST00000584313 TTC21BQ7Z4L5 1316 aa20.23■□□□□ 0.83
CLTC-213ENST00000584313 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
CLTC-213ENST00000584313 KTN1Q86UP2 1357 aaKnown RBP20.22■□□□□ 0.83
CLTC-213ENST00000584313 GCP02774 474 aa20.22■□□□□ 0.83
CLTC-213ENST00000584313 UPF1Q92900 1129 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLTC-213ENST00000584313 NWD2Q9ULI1 1742 aa20.22■□□□□ 0.83
CLTC-213ENST00000584313 COL14A1Q05707 1796 aaKnown RBP20.21■□□□□ 0.83
CLTC-213ENST00000584313 SLC12A5Q9H2X9 1139 aa20.21■□□□□ 0.83
CLTC-213ENST00000584313 GLI3P10071 1580 aa20.21■□□□□ 0.83
CLTC-213ENST00000584313 CPDO75976 1380 aa20.2■□□□□ 0.82
CLTC-213ENST00000584313 PHRF1Q9P1Y6 1649 aaKnown RBP20.2■□□□□ 0.82
CLTC-213ENST00000584313 TTC21AQ8NDW8 1320 aa20.19■□□□□ 0.82
CLTC-213ENST00000584313 NRKQ7Z2Y5 1582 aa20.18■□□□□ 0.82
CLTC-213ENST00000584313 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
CLTC-213ENST00000584313 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
CLTC-213ENST00000584313 HDGFL2Q7Z4V5 671 aaPredicted RBP20.17■□□□□ 0.82
CLTC-213ENST00000584313 TERF2IPQ9NYB0 399 aa20.17■□□□□ 0.82
CLTC-213ENST00000584313 TMF1P82094 1093 aa20.16■□□□□ 0.82
CLTC-213ENST00000584313 SEPT12Q8IYM1 358 aa20.16■□□□□ 0.82
CLTC-213ENST00000584313 NRAPQ86VF7 1730 aa20.16■□□□□ 0.82
CLTC-213ENST00000584313 EP400Q96L91 3159 aa20.16■□□□□ 0.82
CLTC-213ENST00000584313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.15■□□□□ 0.82
CLTC-213ENST00000584313 STRN4Q9NRL3 753 aa20.15■□□□□ 0.82
CLTC-213ENST00000584313 SPATA31A5Q5VU36 1347 aa20.15■□□□□ 0.82
CLTC-213ENST00000584313 SPATA31A7Q8IWB4 1347 aa20.15■□□□□ 0.82
CLTC-213ENST00000584313 PIK3C2AO00443 1686 aa20.15■□□□□ 0.82
CLTC-213ENST00000584313 AKAP12Q02952 1782 aa20.14■□□□□ 0.81
CLTC-213ENST00000584313 SLIT3O75094 1523 aa20.14■□□□□ 0.81
CLTC-213ENST00000584313 NINLQ9Y2I6 1382 aa20.14■□□□□ 0.81
CLTC-213ENST00000584313 FAM98CQ17RN3 349 aaKnown RBP20.14■□□□□ 0.81
CLTC-213ENST00000584313 A0A1W2PP64 1363 aa20.13■□□□□ 0.81
CLTC-213ENST00000584313 EVA1CP58658 441 aa20.12■□□□□ 0.81
CLTC-213ENST00000584313 EDC4Q6P2E9 1401 aaKnown RBP20.11■□□□□ 0.81
CLTC-213ENST00000584313 CAMTA1Q9Y6Y1 1673 aa20.11■□□□□ 0.81
CLTC-213ENST00000584313 ZBTB7CA1YPR0 619 aa20.11■□□□□ 0.81
CLTC-213ENST00000584313 NME9Q86XW9 330 aa20.11■□□□□ 0.81
CLTC-213ENST00000584313 KCNH5Q8NCM2 988 aa20.11■□□□□ 0.81
CLTC-213ENST00000584313 ZRANB1Q9UGI0 708 aa20.11■□□□□ 0.81
CLTC-213ENST00000584313 AATKQ6ZMQ8 1374 aa20.1■□□□□ 0.81
CLTC-213ENST00000584313 SPATA31A1Q5TZJ5 1347 aa20.1■□□□□ 0.81
CLTC-213ENST00000584313 A0A0G2JS52 829 aa20.1■□□□□ 0.81
CLTC-213ENST00000584313 SOX12O15370 315 aa20.1■□□□□ 0.81
CLTC-213ENST00000584313 MYT1Q01538 1121 aa20.1■□□□□ 0.81
CLTC-213ENST00000584313 CDCA8Q53HL2 280 aa20.1■□□□□ 0.81
CLTC-213ENST00000584313 MON2Q7Z3U7 1717 aa20.1■□□□□ 0.81
CLTC-213ENST00000584313 USP31Q70CQ4 1352 aa20.09■□□□□ 0.81
CLTC-213ENST00000584313 LARP1Q6PKG0 1096 aaKnown RBP20.09■□□□□ 0.81
CLTC-213ENST00000584313 ARHGEF25Q86VW2 580 aa20.08■□□□□ 0.81
CLTC-213ENST00000584313 LMO7Q8WWI1 1683 aa20.07■□□□□ 0.8
CLTC-213ENST00000584313 KRT27Q7Z3Y8 459 aa20.07■□□□□ 0.8
CLTC-213ENST00000584313 COL5A2P05997 1499 aaPredicted RBP20.06■□□□□ 0.8
CLTC-213ENST00000584313 USP35Q9P2H5 1018 aa20.06■□□□□ 0.8
CLTC-213ENST00000584313 ANKRD36BQ8N2N9 1353 aa20.06■□□□□ 0.8
CLTC-213ENST00000584313 AXIN2Q9Y2T1 843 aa20.05■□□□□ 0.8
CLTC-213ENST00000584313 NFAT5O94916 1531 aa20.04■□□□□ 0.8
CLTC-213ENST00000584313 EIF4G2P78344 907 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLTC-213ENST00000584313 BARGINQ6ZT62 677 aa20.03■□□□□ 0.8
CLTC-213ENST00000584313 TCP11L2Q8N4U5 519 aa20.03■□□□□ 0.8
CLTC-213ENST00000584313 CCDC125Q86Z20 511 aa20.02■□□□□ 0.8
CLTC-213ENST00000584313 HSPA5P11021 654 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms