RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 USP47Q96K76 1375 aa35.15■■■■□ 3.22
TTC39C-209ENST00000584250 NUTM2GQ5VZR2 741 aa35.13■■■■□ 3.21
TTC39C-209ENST00000584250 CRYBG1Q9Y4K1 1723 aa35.12■■■■□ 3.21
TTC39C-209ENST00000584250 HAP1P54257 671 aaPredicted RBP35.1■■■■□ 3.21
TTC39C-209ENST00000584250 FNBP4Q8N3X1 1017 aaPredicted RBP35.1■■■■□ 3.21
TTC39C-209ENST00000584250 ATAD2Q6PL18 1390 aa35.09■■■■□ 3.21
TTC39C-209ENST00000584250 USP6P35125 1406 aa35.07■■■■□ 3.21
TTC39C-209ENST00000584250 SOCS7O14512 581 aa35.07■■■■□ 3.2
TTC39C-209ENST00000584250 USP21Q9UK80 565 aa35.07■■■■□ 3.2
TTC39C-209ENST00000584250 QTRT2Q9H974 415 aaKnown RBP35.06■■■■□ 3.2
TTC39C-209ENST00000584250 BCL9LQ86UU0 1499 aa35.05■■■■□ 3.2
TTC39C-209ENST00000584250 AKAP12Q02952 1782 aa35.03■■■■□ 3.2
TTC39C-209ENST00000584250 SSH2Q76I76 1423 aa35.03■■■■□ 3.2
TTC39C-209ENST00000584250 ABTB2Q8N961 1025 aa35.02■■■■□ 3.2
TTC39C-209ENST00000584250 SLIT2O94813 1529 aa35.01■■■■□ 3.2
TTC39C-209ENST00000584250 CPSF1Q10570 1443 aaKnown RBP35.01■■■■□ 3.2
TTC39C-209ENST00000584250 SLC12A5Q9H2X9 1139 aa35.01■■■■□ 3.2
TTC39C-209ENST00000584250 FAM83GA6ND36 823 aa35■■■■□ 3.19
TTC39C-209ENST00000584250 CD163L1Q9NR16 1453 aa35■■■■□ 3.19
TTC39C-209ENST00000584250 PHRF1Q9P1Y6 1649 aaKnown RBP34.99■■■■□ 3.19
TTC39C-209ENST00000584250 RXRBP28702 533 aa34.98■■■■□ 3.19
TTC39C-209ENST00000584250 TMC1Q8TDI8 760 aa34.98■■■■□ 3.19
TTC39C-209ENST00000584250 PLCH1Q4KWH8 1693 aa34.97■■■■□ 3.19
TTC39C-209ENST00000584250 ATRNO75882 1429 aa34.97■■■■□ 3.19
TTC39C-209ENST00000584250 PIK3C2AO00443 1686 aa34.95■■■■□ 3.18
TTC39C-209ENST00000584250 ZNF692Q9BU19 519 aaPredicted RBP34.94■■■■□ 3.18
TTC39C-209ENST00000584250 TTC21BQ7Z4L5 1316 aa34.94■■■■□ 3.18
TTC39C-209ENST00000584250 BRD4O60885 1362 aaPredicted RBP34.94■■■■□ 3.18
TTC39C-209ENST00000584250 NRKQ7Z2Y5 1582 aa34.94■■■■□ 3.18
TTC39C-209ENST00000584250 MON2Q7Z3U7 1717 aa34.93■■■■□ 3.18
TTC39C-209ENST00000584250 KTN1Q86UP2 1357 aaKnown RBP34.93■■■■□ 3.18
TTC39C-209ENST00000584250 USP19O94966 1318 aa34.93■■■■□ 3.18
TTC39C-209ENST00000584250 PUS7Q96PZ0 661 aaKnown RBP34.93■■■■□ 3.18
TTC39C-209ENST00000584250 TRPC5Q9UL62 973 aaPredicted RBP34.93■■■■□ 3.18
TTC39C-209ENST00000584250 RBM6P78332 1123 aaKnown RBP34.92■■■■□ 3.18
TTC39C-209ENST00000584250 ZC3H6P61129 1189 aaKnown RBP34.91■■■■□ 3.18
TTC39C-209ENST00000584250 UNC5CLQ8IV45 518 aa34.91■■■■□ 3.18
TTC39C-209ENST00000584250 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.91■■■■□ 3.18
TTC39C-209ENST00000584250 KIAA0232Q92628 1395 aa34.89■■■■□ 3.18
TTC39C-209ENST00000584250 TMF1P82094 1093 aa34.89■■■■□ 3.18
TTC39C-209ENST00000584250 NLRP13Q86W25 1043 aa34.89■■■■□ 3.18
TTC39C-209ENST00000584250 NLRP6P59044 892 aa34.88■■■■□ 3.17
TTC39C-209ENST00000584250 CHRNA2Q15822 529 aa34.88■■■■□ 3.17
TTC39C-209ENST00000584250 COL14A1Q05707 1796 aaKnown RBP34.87■■■■□ 3.17
TTC39C-209ENST00000584250 NWD2Q9ULI1 1742 aa34.87■■■■□ 3.17
TTC39C-209ENST00000584250 PRDM11Q9NQV5 511 aa34.87■■■■□ 3.17
TTC39C-209ENST00000584250 RGS12O14924 1447 aa34.87■■■■□ 3.17
TTC39C-209ENST00000584250 A0A1W2PP64 1363 aa34.87■■■■□ 3.17
TTC39C-209ENST00000584250 ZRANB1Q9UGI0 708 aa34.86■■■■□ 3.17
TTC39C-209ENST00000584250 NRAPQ86VF7 1730 aa34.85■■■■□ 3.17
TTC39C-209ENST00000584250 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.85■■■■□ 3.17
TTC39C-209ENST00000584250 BTG4Q9NY30 223 aa34.85■■■■□ 3.17
TTC39C-209ENST00000584250 SLC24A1O60721 1099 aa34.84■■■■□ 3.17
TTC39C-209ENST00000584250 GCP02774 474 aa34.84■■■■□ 3.17
TTC39C-209ENST00000584250 HSPA5P11021 654 aaKnown RBP34.84■■■■□ 3.17
TTC39C-209ENST00000584250 CDK12Q9NYV4 1490 aaPredicted RBP34.84■■■■□ 3.17
TTC39C-209ENST00000584250 GLI3P10071 1580 aa34.83■■■■□ 3.17
TTC39C-209ENST00000584250 HDGFL2Q7Z4V5 671 aaPredicted RBP34.82■■■■□ 3.16
TTC39C-209ENST00000584250 GJD4Q96KN9 370 aaPredicted RBP34.82■■■■□ 3.16
TTC39C-209ENST00000584250 TTC21AQ8NDW8 1320 aa34.81■■■■□ 3.16
TTC39C-209ENST00000584250 SLIT3O75094 1523 aa34.81■■■■□ 3.16
TTC39C-209ENST00000584250 NME9Q86XW9 330 aa34.8■■■■□ 3.16
TTC39C-209ENST00000584250 TERF2IPQ9NYB0 399 aa34.8■■■■□ 3.16
TTC39C-209ENST00000584250 EIF4G2P78344 907 aaKnown RBP eCLIP34.79■■■■□ 3.16
TTC39C-209ENST00000584250 VPS72Q15906 364 aa34.78■■■■□ 3.16
TTC39C-209ENST00000584250 NINLQ9Y2I6 1382 aa34.76■■■■□ 3.16
TTC39C-209ENST00000584250 EDC4Q6P2E9 1401 aaKnown RBP34.76■■■■□ 3.16
TTC39C-209ENST00000584250 CPDO75976 1380 aa34.75■■■■□ 3.15
TTC39C-209ENST00000584250 MYOM1P52179 1685 aa34.74■■■■□ 3.15
TTC39C-209ENST00000584250 SOX12O15370 315 aa34.74■■■■□ 3.15
TTC39C-209ENST00000584250 CCDC9Q9Y3X0 531 aaKnown RBP34.74■■■■□ 3.15
TTC39C-209ENST00000584250 LMO7Q8WWI1 1683 aa34.73■■■■□ 3.15
TTC39C-209ENST00000584250 CAMTA1Q9Y6Y1 1673 aa34.73■■■■□ 3.15
TTC39C-209ENST00000584250 ZBTB7CA1YPR0 619 aa34.72■■■■□ 3.15
TTC39C-209ENST00000584250 ANKRD36BQ8N2N9 1353 aa34.71■■■■□ 3.15
TTC39C-209ENST00000584250 CDCA8Q53HL2 280 aa34.7■■■■□ 3.15
TTC39C-209ENST00000584250 USP31Q70CQ4 1352 aa34.7■■■■□ 3.15
TTC39C-209ENST00000584250 STRN4Q9NRL3 753 aa34.69■■■■□ 3.14
TTC39C-209ENST00000584250 USP54Q70EL1 1684 aa34.68■■■■□ 3.14
TTC39C-209ENST00000584250 NFAT5O94916 1531 aa34.67■■■■□ 3.14
TTC39C-209ENST00000584250 POLR3GLQ9BT43 218 aa34.66■■■■□ 3.14
TTC39C-209ENST00000584250 COL18A1P39060 1754 aa34.65■■■■□ 3.14
TTC39C-209ENST00000584250 C11orf95C9JLR9 678 aaPredicted RBP34.65■■■■□ 3.14
TTC39C-209ENST00000584250 SPATA31A5Q5VU36 1347 aa34.63■■■■□ 3.13
TTC39C-209ENST00000584250 SPATA31A7Q8IWB4 1347 aa34.63■■■■□ 3.13
TTC39C-209ENST00000584250 ARHGEF25Q86VW2 580 aa34.63■■■■□ 3.13
TTC39C-209ENST00000584250 OVOS2A0A0J9YW53 1432 aa34.63■■■■□ 3.13
TTC39C-209ENST00000584250 OVOS2Q6IE36 1432 aa34.63■■■■□ 3.13
TTC39C-209ENST00000584250 KCNH5Q8NCM2 988 aa34.62■■■■□ 3.13
TTC39C-209ENST00000584250 CARD14Q9BXL6 1004 aa34.61■■■■□ 3.13
TTC39C-209ENST00000584250 AXIN2Q9Y2T1 843 aa34.61■■■■□ 3.13
TTC39C-209ENST00000584250 AATKQ6ZMQ8 1374 aa34.61■■■■□ 3.13
TTC39C-209ENST00000584250 BRWD3Q6RI45 1802 aa34.6■■■■□ 3.13
TTC39C-209ENST00000584250 FAM98CQ17RN3 349 aaKnown RBP34.6■■■■□ 3.13
TTC39C-209ENST00000584250 LARP1Q6PKG0 1096 aaKnown RBP34.6■■■■□ 3.13
TTC39C-209ENST00000584250 SEPT12Q8IYM1 358 aa34.59■■■■□ 3.13
TTC39C-209ENST00000584250 COL5A2P05997 1499 aaPredicted RBP34.58■■■■□ 3.13
TTC39C-209ENST00000584250 ONECUT3O60422 494 aaPredicted RBP34.58■■■■□ 3.13
TTC39C-209ENST00000584250 EVA1CP58658 441 aa34.58■■■■□ 3.13
TTC39C-209ENST00000584250 RGPD5Q99666 1765 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms