RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 KCNJ4P48050 445 aa12.99□□□□□ -0.33
RNF43-207ENST00000583753 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
RNF43-207ENST00000583753 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
RNF43-207ENST00000583753 CD2BP2O95400 341 aaKnown RBP12.99□□□□□ -0.33
RNF43-207ENST00000583753 BAG4O95429 457 aaKnown RBP12.99□□□□□ -0.33
RNF43-207ENST00000583753 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
RNF43-207ENST00000583753 LTV1Q96GA3 475 aaPredicted RBP12.99□□□□□ -0.33
RNF43-207ENST00000583753 LARP6Q9BRS8 491 aaKnown RBP12.99□□□□□ -0.33
RNF43-207ENST00000583753 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
RNF43-207ENST00000583753 PLA2R1Q13018 1463 aa12.98□□□□□ -0.33
RNF43-207ENST00000583753 RRP9O43818 475 aaKnown RBP12.98□□□□□ -0.33
RNF43-207ENST00000583753 MCCP23508 829 aa12.98□□□□□ -0.33
RNF43-207ENST00000583753 KIAA2012Q0VF49 1180 aa12.98□□□□□ -0.33
RNF43-207ENST00000583753 NUCB2P80303 420 aa12.98□□□□□ -0.33
RNF43-207ENST00000583753 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.98□□□□□ -0.33
RNF43-207ENST00000583753 PIK3C2GO75747 1445 aa12.97□□□□□ -0.33
RNF43-207ENST00000583753 INTS3Q68E01 1043 aaKnown RBP12.97□□□□□ -0.33
RNF43-207ENST00000583753 CCDC27Q2M243 656 aa12.97□□□□□ -0.33
RNF43-207ENST00000583753 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
RNF43-207ENST00000583753 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
RNF43-207ENST00000583753 ITSN2Q9NZM3 1697 aa12.97□□□□□ -0.33
RNF43-207ENST00000583753 ZSCAN30Q86W11 494 aa12.97□□□□□ -0.33
RNF43-207ENST00000583753 DRC7Q8IY82 874 aa12.97□□□□□ -0.33
RNF43-207ENST00000583753 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
RNF43-207ENST00000583753 NOS1P29475 1434 aa12.97□□□□□ -0.33
RNF43-207ENST00000583753 MAP4K4O95819 1239 aaPredicted RBP12.96□□□□□ -0.33
RNF43-207ENST00000583753 NUCB1Q02818 461 aa12.96□□□□□ -0.33
RNF43-207ENST00000583753 UPF3BQ9BZI7 483 aaKnown RBP12.96□□□□□ -0.33
RNF43-207ENST00000583753 WDR7Q9Y4E6 1490 aa12.96□□□□□ -0.33
RNF43-207ENST00000583753 GNAI1P63096 354 aa12.96□□□□□ -0.33
RNF43-207ENST00000583753 API5Q9BZZ5 524 aaKnown RBP12.96□□□□□ -0.33
RNF43-207ENST00000583753 EMILIN1Q9Y6C2 1016 aa12.96□□□□□ -0.33
RNF43-207ENST00000583753 ZGPATQ8N5A5 531 aaKnown RBP12.96□□□□□ -0.34
RNF43-207ENST00000583753 GCC1Q96CN9 775 aa12.96□□□□□ -0.34
RNF43-207ENST00000583753 STAC3Q96MF2 364 aa12.96□□□□□ -0.34
RNF43-207ENST00000583753 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.34
RNF43-207ENST00000583753 HDAC1Q13547 482 aaPredicted RBP12.95□□□□□ -0.34
RNF43-207ENST00000583753 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
RNF43-207ENST00000583753 ZBTB40Q9NUA8 1239 aa12.95□□□□□ -0.34
RNF43-207ENST00000583753 UQCRHLA0A096LP55 91 aa12.95□□□□□ -0.34
RNF43-207ENST00000583753 UQCRHP07919 91 aa12.95□□□□□ -0.34
RNF43-207ENST00000583753 OTUD7AQ8TE49 926 aaPredicted RBP12.95□□□□□ -0.34
RNF43-207ENST00000583753 EXOC6BQ9Y2D4 811 aa12.95□□□□□ -0.34
RNF43-207ENST00000583753 RABEP1Q15276 862 aa12.95□□□□□ -0.34
RNF43-207ENST00000583753 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
RNF43-207ENST00000583753 REC8O95072 547 aa12.94□□□□□ -0.34
RNF43-207ENST00000583753 WAPLQ7Z5K2 1190 aa12.94□□□□□ -0.34
RNF43-207ENST00000583753 CDK19Q9BWU1 502 aa12.94□□□□□ -0.34
RNF43-207ENST00000583753 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
RNF43-207ENST00000583753 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
RNF43-207ENST00000583753 NAP1L2Q9ULW6 460 aaPredicted RBP12.94□□□□□ -0.34
RNF43-207ENST00000583753 PKP1Q13835 747 aa12.94□□□□□ -0.34
RNF43-207ENST00000583753 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
RNF43-207ENST00000583753 F6X3S4 739 aa12.93□□□□□ -0.34
RNF43-207ENST00000583753 HMMRO75330 724 aa12.93□□□□□ -0.34
RNF43-207ENST00000583753 RAPGEF3O95398 923 aa12.93□□□□□ -0.34
RNF43-207ENST00000583753 ZNF830Q96NB3 372 aaPredicted RBP12.93□□□□□ -0.34
RNF43-207ENST00000583753 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
RNF43-207ENST00000583753 TPM2P07951 284 aa12.93□□□□□ -0.34
RNF43-207ENST00000583753 BMP2KLQ5H9B9 411 aa12.93□□□□□ -0.34
RNF43-207ENST00000583753 MCM10Q7L590 875 aa12.93□□□□□ -0.34
RNF43-207ENST00000583753 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
RNF43-207ENST00000583753 PRIM1P49642 420 aaKnown RBP12.92□□□□□ -0.34
RNF43-207ENST00000583753 RAB3GAP1Q15042 981 aa12.92□□□□□ -0.34
RNF43-207ENST00000583753 COG3Q96JB2 828 aa12.92□□□□□ -0.34
RNF43-207ENST00000583753 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
RNF43-207ENST00000583753 GOLGA6L4A6NEF3 574 aa12.92□□□□□ -0.34
RNF43-207ENST00000583753 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
RNF43-207ENST00000583753 STK31Q9BXU1 1019 aa12.92□□□□□ -0.34
RNF43-207ENST00000583753 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
RNF43-207ENST00000583753 INSRP06213 1382 aa12.92□□□□□ -0.34
RNF43-207ENST00000583753 KDM5DQ9BY66 1539 aa12.92□□□□□ -0.34
RNF43-207ENST00000583753 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 FAM177BA6PVY3 158 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 FKBP5Q13451 457 aaPredicted RBP12.91□□□□□ -0.34
RNF43-207ENST00000583753 SULT6B1Q6IMI4 303 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 SYAP1Q96A49 352 aaPredicted RBP12.91□□□□□ -0.34
RNF43-207ENST00000583753 FYB1O15117 783 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 FIBPO43427 364 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 ZSCAN23Q3MJ62 389 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 C8orf58Q8NAV2 365 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 SPC24Q8NBT2 197 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
RNF43-207ENST00000583753 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
RNF43-207ENST00000583753 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.34
RNF43-207ENST00000583753 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
RNF43-207ENST00000583753 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
RNF43-207ENST00000583753 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
RNF43-207ENST00000583753 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
RNF43-207ENST00000583753 NME9Q86XW9 330 aa12.9□□□□□ -0.34
RNF43-207ENST00000583753 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
RNF43-207ENST00000583753 A0A0U1RQG5 324 aaPredicted RBP12.89□□□□□ -0.35
RNF43-207ENST00000583753 LMOD3Q0VAK6 560 aa12.89□□□□□ -0.35
RNF43-207ENST00000583753 NFE2L2Q16236 605 aa12.89□□□□□ -0.35
RNF43-207ENST00000583753 NUTM2GQ5VZR2 741 aa12.89□□□□□ -0.35
RNF43-207ENST00000583753 RBSNQ9H1K0 784 aa12.89□□□□□ -0.35
RNF43-207ENST00000583753 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
RNF43-207ENST00000583753 SHANK2Q9UPX8 1470 aa12.89□□□□□ -0.35
RNF43-207ENST00000583753 CHAF1AQ13111 956 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms