RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 MYT1Q01538 1121 aa22.1■■□□□ 1.13
SREBF1-222ENST00000583732 HRCP23327 699 aa22.08■■□□□ 1.13
SREBF1-222ENST00000583732 STAC3Q96MF2 364 aa22.08■■□□□ 1.13
SREBF1-222ENST00000583732 BTG4Q9NY30 223 aa22.08■■□□□ 1.13
SREBF1-222ENST00000583732 PHRF1Q9P1Y6 1649 aaKnown RBP22.06■■□□□ 1.12
SREBF1-222ENST00000583732 KIAA1210Q9ULL0 1709 aa22.06■■□□□ 1.12
SREBF1-222ENST00000583732 DEFB132Q7Z7B7 95 aa22.06■■□□□ 1.12
SREBF1-222ENST00000583732 TOPAZ1Q8N9V7 1692 aa22.06■■□□□ 1.12
SREBF1-222ENST00000583732 FAM98CQ17RN3 349 aaKnown RBP22.05■■□□□ 1.12
SREBF1-222ENST00000583732 KRT27Q7Z3Y8 459 aa22.05■■□□□ 1.12
SREBF1-222ENST00000583732 NUDT16Q96DE0 195 aaKnown RBP22.05■■□□□ 1.12
SREBF1-222ENST00000583732 SF3B2Q13435 895 aaKnown RBP22.04■■□□□ 1.12
SREBF1-222ENST00000583732 ONECUT3O60422 494 aaPredicted RBP22.02■■□□□ 1.12
SREBF1-222ENST00000583732 CDK19Q9BWU1 502 aa22.02■■□□□ 1.12
SREBF1-222ENST00000583732 PRDM11Q9NQV5 511 aa22.01■■□□□ 1.11
SREBF1-222ENST00000583732 NUTM2GQ5VZR2 741 aa22■■□□□ 1.11
SREBF1-222ENST00000583732 NBPF1Q3BBV0 1214 aa21.98■■□□□ 1.11
SREBF1-222ENST00000583732 KIAA0232Q92628 1395 aa21.98■■□□□ 1.11
SREBF1-222ENST00000583732 CHRNA2Q15822 529 aa21.97■■□□□ 1.11
SREBF1-222ENST00000583732 THSD7AQ9UPZ6 1657 aa21.97■■□□□ 1.11
SREBF1-222ENST00000583732 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
SREBF1-222ENST00000583732 FAM182BQ5T319 152 aa21.96■■□□□ 1.11
SREBF1-222ENST00000583732 RGPD1P0DJD0 1748 aa21.96■■□□□ 1.11
SREBF1-222ENST00000583732 ACEP12821 1306 aa21.96■■□□□ 1.11
SREBF1-222ENST00000583732 SPATA31A5Q5VU36 1347 aa21.96■■□□□ 1.11
SREBF1-222ENST00000583732 SPATA31A7Q8IWB4 1347 aa21.96■■□□□ 1.11
SREBF1-222ENST00000583732 STRN4Q9NRL3 753 aa21.95■■□□□ 1.1
SREBF1-222ENST00000583732 NRKQ7Z2Y5 1582 aa21.95■■□□□ 1.1
SREBF1-222ENST00000583732 ZC3H6P61129 1189 aaKnown RBP21.94■■□□□ 1.1
SREBF1-222ENST00000583732 POLR3AO14802 1390 aaPredicted RBP21.94■■□□□ 1.1
SREBF1-222ENST00000583732 NBPF8Q3BBV2 869 aa21.93■■□□□ 1.1
SREBF1-222ENST00000583732 CCDC61Q9Y6R9 512 aa21.93■■□□□ 1.1
SREBF1-222ENST00000583732 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
SREBF1-222ENST00000583732 SRCAPQ6ZRS2 3230 aa21.92■■□□□ 1.1
SREBF1-222ENST00000583732 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
SREBF1-222ENST00000583732 BAG6P46379 1132 aa21.91■■□□□ 1.1
SREBF1-222ENST00000583732 PPIP5K1Q6PFW1 1433 aa21.9■■□□□ 1.1
SREBF1-222ENST00000583732 CENPJQ9HC77 1338 aaPredicted RBP21.9■■□□□ 1.1
SREBF1-222ENST00000583732 SPATA31A1Q5TZJ5 1347 aa21.89■■□□□ 1.1
SREBF1-222ENST00000583732 PLEKHG3A1L390 1219 aa21.89■■□□□ 1.09
SREBF1-222ENST00000583732 CABP2Q9NPB3 220 aa21.89■■□□□ 1.09
SREBF1-222ENST00000583732 ABTB2Q8N961 1025 aa21.88■■□□□ 1.09
SREBF1-222ENST00000583732 USP35Q9P2H5 1018 aa21.88■■□□□ 1.09
SREBF1-222ENST00000583732 PSDA5PKW4 1024 aaPredicted RBP21.87■■□□□ 1.09
SREBF1-222ENST00000583732 LMO7Q8WWI1 1683 aa21.86■■□□□ 1.09
SREBF1-222ENST00000583732 EN1Q05925 392 aaPredicted RBP21.86■■□□□ 1.09
SREBF1-222ENST00000583732 SSH2Q76I76 1423 aa21.86■■□□□ 1.09
SREBF1-222ENST00000583732 CAMTA1Q9Y6Y1 1673 aa21.85■■□□□ 1.09
SREBF1-222ENST00000583732 TRPM1Q7Z4N2 1603 aa21.85■■□□□ 1.09
SREBF1-222ENST00000583732 EVA1CP58658 441 aa21.85■■□□□ 1.09
SREBF1-222ENST00000583732 LRP5O75197 1615 aa21.84■■□□□ 1.09
SREBF1-222ENST00000583732 L3MBTL2Q969R5 705 aa21.83■■□□□ 1.09
SREBF1-222ENST00000583732 USP19O94966 1318 aa21.82■■□□□ 1.08
SREBF1-222ENST00000583732 ZBTB7CA1YPR0 619 aa21.82■■□□□ 1.08
SREBF1-222ENST00000583732 LARP1Q6PKG0 1096 aaKnown RBP21.81■■□□□ 1.08
SREBF1-222ENST00000583732 SIN3AQ96ST3 1273 aa21.81■■□□□ 1.08
SREBF1-222ENST00000583732 CPDO75976 1380 aa21.8■■□□□ 1.08
SREBF1-222ENST00000583732 NLRP13Q86W25 1043 aa21.8■■□□□ 1.08
SREBF1-222ENST00000583732 TRIM37O94972 964 aa21.79■■□□□ 1.08
SREBF1-222ENST00000583732 CABP1Q9NZU7 370 aa21.79■■□□□ 1.08
SREBF1-222ENST00000583732 USP6P35125 1406 aa21.79■■□□□ 1.08
SREBF1-222ENST00000583732 PIK3C2AO00443 1686 aa21.79■■□□□ 1.08
SREBF1-222ENST00000583732 GCP02774 474 aa21.78■■□□□ 1.08
SREBF1-222ENST00000583732 NEUROD1Q13562 356 aa21.78■■□□□ 1.08
SREBF1-222ENST00000583732 EZH2Q15910 746 aaKnown RBP21.78■■□□□ 1.08
SREBF1-222ENST00000583732 FAM196AQ6ZSG2 479 aa21.77■■□□□ 1.08
SREBF1-222ENST00000583732 DISP2A7MBM2 1401 aa21.77■■□□□ 1.08
SREBF1-222ENST00000583732 COL5A2P05997 1499 aaPredicted RBP21.77■■□□□ 1.07
SREBF1-222ENST00000583732 PDE3BQ13370 1112 aa21.76■■□□□ 1.07
SREBF1-222ENST00000583732 BARGINQ6ZT62 677 aa21.76■■□□□ 1.07
SREBF1-222ENST00000583732 SLIT3O75094 1523 aa21.75■■□□□ 1.07
SREBF1-222ENST00000583732 PARP4Q9UKK3 1724 aaKnown RBP21.75■■□□□ 1.07
SREBF1-222ENST00000583732 NLRP6P59044 892 aa21.75■■□□□ 1.07
SREBF1-222ENST00000583732 R3HDM1Q15032 1099 aaKnown RBP21.75■■□□□ 1.07
SREBF1-222ENST00000583732 TCP11L2Q8N4U5 519 aa21.75■■□□□ 1.07
SREBF1-222ENST00000583732 BRD4O60885 1362 aaPredicted RBP21.74■■□□□ 1.07
SREBF1-222ENST00000583732 ROCK2O75116 1388 aaKnown RBP21.74■■□□□ 1.07
SREBF1-222ENST00000583732 AKAP12Q02952 1782 aa21.74■■□□□ 1.07
SREBF1-222ENST00000583732 EVC2Q86UK5 1308 aa21.74■■□□□ 1.07
SREBF1-222ENST00000583732 APBA3O96018 575 aa21.73■■□□□ 1.07
SREBF1-222ENST00000583732 RREB1Q92766 1687 aa21.72■■□□□ 1.07
SREBF1-222ENST00000583732 NUP188Q5SRE5 1749 aa21.72■■□□□ 1.07
SREBF1-222ENST00000583732 WNK3Q9BYP7 1800 aa21.71■■□□□ 1.07
SREBF1-222ENST00000583732 CRB1P82279 1406 aa21.71■■□□□ 1.07
SREBF1-222ENST00000583732 COL18A1P39060 1754 aa21.7■■□□□ 1.06
SREBF1-222ENST00000583732 CAMKK2Q96RR4 588 aa21.7■■□□□ 1.06
SREBF1-222ENST00000583732 LRRC37A3O60309 1634 aa21.69■■□□□ 1.06
SREBF1-222ENST00000583732 RGPD5Q99666 1765 aa21.69■■□□□ 1.06
SREBF1-222ENST00000583732 THRAP3Q9Y2W1 955 aaKnown RBP21.69■■□□□ 1.06
SREBF1-222ENST00000583732 SOX12O15370 315 aa21.68■■□□□ 1.06
SREBF1-222ENST00000583732 AATKQ6ZMQ8 1374 aa21.67■■□□□ 1.06
SREBF1-222ENST00000583732 CPSF1Q10570 1443 aaKnown RBP21.65■■□□□ 1.06
SREBF1-222ENST00000583732 PARD3Q8TEW0 1356 aa21.65■■□□□ 1.06
SREBF1-222ENST00000583732 TTC21BQ7Z4L5 1316 aa21.65■■□□□ 1.06
SREBF1-222ENST00000583732 TOM1L2Q6ZVM7 507 aa21.65■■□□□ 1.06
SREBF1-222ENST00000583732 MON2Q7Z3U7 1717 aa21.65■■□□□ 1.06
SREBF1-222ENST00000583732 PEAK1Q9H792 1746 aa21.65■■□□□ 1.06
SREBF1-222ENST00000583732 SBF2Q86WG5 1849 aa21.64■■□□□ 1.05
SREBF1-222ENST00000583732 OVOS2A0A0G2JMS6 1433 aa21.63■■□□□ 1.05
SREBF1-222ENST00000583732 OVOS2A0A0J9YW53 1432 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms