RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 PDE4CQ08493 712 aa19.68■□□□□ 0.74
ERBB2-214ENST00000583038 HECW1Q76N89 1606 aa19.67■□□□□ 0.74
ERBB2-214ENST00000583038 SDF4Q9BRK5 362 aa19.67■□□□□ 0.74
ERBB2-214ENST00000583038 RAD21O60216 631 aa19.66■□□□□ 0.74
ERBB2-214ENST00000583038 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
ERBB2-214ENST00000583038 NEK4P51957 841 aa19.66■□□□□ 0.74
ERBB2-214ENST00000583038 OLFM4Q6UX06 510 aa19.66■□□□□ 0.74
ERBB2-214ENST00000583038 TIAM1Q13009 1591 aa19.66■□□□□ 0.74
ERBB2-214ENST00000583038 ERBINQ96RT1 1412 aa19.65■□□□□ 0.74
ERBB2-214ENST00000583038 HDGFL1Q5TGJ6 251 aa19.65■□□□□ 0.74
ERBB2-214ENST00000583038 ATF7IPQ6VMQ6 1270 aa19.65■□□□□ 0.74
ERBB2-214ENST00000583038 CCDC39Q9UFE4 941 aa19.65■□□□□ 0.74
ERBB2-214ENST00000583038 NUTM2GQ5VZR2 741 aa19.64■□□□□ 0.74
ERBB2-214ENST00000583038 ARGLU1Q9NWB6 273 aaPredicted RBP19.64■□□□□ 0.74
ERBB2-214ENST00000583038 NASPP49321 788 aaPredicted RBP19.64■□□□□ 0.73
ERBB2-214ENST00000583038 CCDC43Q96MW1 224 aaKnown RBP19.64■□□□□ 0.73
ERBB2-214ENST00000583038 CWC22Q9HCG8 908 aaKnown RBP19.64■□□□□ 0.73
ERBB2-214ENST00000583038 TATP17735 454 aaPredicted RBP19.64■□□□□ 0.73
ERBB2-214ENST00000583038 TEX35Q5T0J7 233 aa19.64■□□□□ 0.73
ERBB2-214ENST00000583038 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
ERBB2-214ENST00000583038 CDK19Q9BWU1 502 aa19.63■□□□□ 0.73
ERBB2-214ENST00000583038 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
ERBB2-214ENST00000583038 DAPK1P53355 1430 aa19.63■□□□□ 0.73
ERBB2-214ENST00000583038 SETQ01105 290 aaPredicted RBP19.63■□□□□ 0.73
ERBB2-214ENST00000583038 TRAK2O60296 914 aa19.63■□□□□ 0.73
ERBB2-214ENST00000583038 SULT6B1Q6IMI4 303 aa19.63■□□□□ 0.73
ERBB2-214ENST00000583038 SRCIN1Q9C0H9 1055 aa19.63■□□□□ 0.73
ERBB2-214ENST00000583038 ESCO1Q5FWF5 840 aa19.62■□□□□ 0.73
ERBB2-214ENST00000583038 SLC4A2P04920 1241 aa19.62■□□□□ 0.73
ERBB2-214ENST00000583038 ACBD3Q9H3P7 528 aa19.62■□□□□ 0.73
ERBB2-214ENST00000583038 ANO8Q9HCE9 1232 aaPredicted RBP19.62■□□□□ 0.73
ERBB2-214ENST00000583038 NOB1Q9ULX3 412 aaKnown RBP19.62■□□□□ 0.73
ERBB2-214ENST00000583038 IFT57Q9NWB7 429 aa19.62■□□□□ 0.73
ERBB2-214ENST00000583038 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
ERBB2-214ENST00000583038 KINO60870 393 aaKnown RBP19.61■□□□□ 0.73
ERBB2-214ENST00000583038 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
ERBB2-214ENST00000583038 PROSER2Q86WR7 435 aaPredicted RBP19.61■□□□□ 0.73
ERBB2-214ENST00000583038 MNS1Q8NEH6 495 aa19.61■□□□□ 0.73
ERBB2-214ENST00000583038 PRM3Q9NNZ6 103 aa19.61■□□□□ 0.73
ERBB2-214ENST00000583038 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
ERBB2-214ENST00000583038 FCHSD2O94868 740 aa19.61■□□□□ 0.73
ERBB2-214ENST00000583038 ANKRD1Q15327 319 aa19.61■□□□□ 0.73
ERBB2-214ENST00000583038 RTEL1-TNFRSF6BF6WH68 1400 aa19.6■□□□□ 0.73
ERBB2-214ENST00000583038 MVPQ14764 893 aaKnown RBP19.6■□□□□ 0.73
ERBB2-214ENST00000583038 DHX8Q14562 1220 aaKnown RBP19.6■□□□□ 0.73
ERBB2-214ENST00000583038 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
ERBB2-214ENST00000583038 CDR1P51861 262 aa19.59■□□□□ 0.73
ERBB2-214ENST00000583038 SLC3A2P08195 630 aaKnown RBP19.59■□□□□ 0.73
ERBB2-214ENST00000583038 ZNF396Q96N95 335 aaPredicted RBP19.59■□□□□ 0.73
ERBB2-214ENST00000583038 LRRCC1Q9C099 1032 aa19.59■□□□□ 0.73
ERBB2-214ENST00000583038 AMER1Q5JTC6 1135 aaPredicted RBP19.59■□□□□ 0.73
ERBB2-214ENST00000583038 MEX3CQ5U5Q3 659 aaKnown RBP19.59■□□□□ 0.73
ERBB2-214ENST00000583038 PDIA4P13667 645 aaKnown RBP19.58■□□□□ 0.73
ERBB2-214ENST00000583038 MTERF4Q7Z6M4 381 aaKnown RBP19.58■□□□□ 0.73
ERBB2-214ENST00000583038 JMYQ8N9B5 988 aa19.58■□□□□ 0.73
ERBB2-214ENST00000583038 CCDC158Q5M9N0 1113 aa19.58■□□□□ 0.73
ERBB2-214ENST00000583038 TSR2Q969E8 191 aaKnown RBP19.58■□□□□ 0.73
ERBB2-214ENST00000583038 BACH2Q9BYV9 841 aa19.58■□□□□ 0.73
ERBB2-214ENST00000583038 AEBP1Q8IUX7 1158 aa19.58■□□□□ 0.72
ERBB2-214ENST00000583038 BCAR3O75815 825 aa19.57■□□□□ 0.72
ERBB2-214ENST00000583038 PIP4K2AP48426 406 aaPredicted RBP19.57■□□□□ 0.72
ERBB2-214ENST00000583038 FBXW7Q969H0 707 aa19.57■□□□□ 0.72
ERBB2-214ENST00000583038 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.57■□□□□ 0.72
ERBB2-214ENST00000583038 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
ERBB2-214ENST00000583038 RPAP2Q8IXW5 612 aaPredicted RBP19.57■□□□□ 0.72
ERBB2-214ENST00000583038 CYP46A1Q9Y6A2 500 aa19.56■□□□□ 0.72
ERBB2-214ENST00000583038 ZNF530Q6P9A1 599 aaPredicted RBP19.56■□□□□ 0.72
ERBB2-214ENST00000583038 GNL3LQ9NVN8 582 aaKnown RBP19.56■□□□□ 0.72
ERBB2-214ENST00000583038 DNAJC2Q99543 621 aaKnown RBP19.56■□□□□ 0.72
ERBB2-214ENST00000583038 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
ERBB2-214ENST00000583038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.55■□□□□ 0.72
ERBB2-214ENST00000583038 CIZ1Q9ULV3 898 aaPredicted RBP19.55■□□□□ 0.72
ERBB2-214ENST00000583038 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
ERBB2-214ENST00000583038 MAP7D2Q96T17 732 aa19.55■□□□□ 0.72
ERBB2-214ENST00000583038 OFD1O75665 1012 aa19.55■□□□□ 0.72
ERBB2-214ENST00000583038 WDR33Q9C0J8 1336 aaKnown RBP19.55■□□□□ 0.72
ERBB2-214ENST00000583038 CCP110O43303 1012 aa19.54■□□□□ 0.72
ERBB2-214ENST00000583038 TXLNAP40222 546 aa19.54■□□□□ 0.72
ERBB2-214ENST00000583038 CAVIN1Q6NZI2 390 aaKnown RBP19.54■□□□□ 0.72
ERBB2-214ENST00000583038 FAM13BQ9NYF5 915 aa19.54■□□□□ 0.72
ERBB2-214ENST00000583038 FOSBP53539 338 aa19.54■□□□□ 0.72
ERBB2-214ENST00000583038 NAIPQ13075 1403 aa19.54■□□□□ 0.72
ERBB2-214ENST00000583038 TRIM5Q9C035 493 aa19.54■□□□□ 0.72
ERBB2-214ENST00000583038 TSPY26PQ9H489 355 aa19.54■□□□□ 0.72
ERBB2-214ENST00000583038 RUFY1Q96T51 708 aa19.53■□□□□ 0.72
ERBB2-214ENST00000583038 FILIP1LQ4L180 1135 aa19.53■□□□□ 0.72
ERBB2-214ENST00000583038 ZNF771Q7L3S4 317 aaPredicted RBP19.53■□□□□ 0.72
ERBB2-214ENST00000583038 HSP90B2PQ58FF3 399 aa19.53■□□□□ 0.72
ERBB2-214ENST00000583038 AKNAQ7Z591 1439 aa19.52■□□□□ 0.72
ERBB2-214ENST00000583038 CHD1LQ86WJ1 897 aa19.52■□□□□ 0.72
ERBB2-214ENST00000583038 NACAP1Q9BZK3 213 aa19.52■□□□□ 0.72
ERBB2-214ENST00000583038 CCDC61Q9Y6R9 512 aa19.52■□□□□ 0.72
ERBB2-214ENST00000583038 STK38Q15208 465 aa19.52■□□□□ 0.72
ERBB2-214ENST00000583038 AK7Q96M32 723 aa19.52■□□□□ 0.72
ERBB2-214ENST00000583038 C1orf115Q9H7X2 142 aa19.52■□□□□ 0.72
ERBB2-214ENST00000583038 K7ELQ4 463 aaPredicted RBP19.52■□□□□ 0.71
ERBB2-214ENST00000583038 ZSCAN25Q6NSZ9 544 aa19.51■□□□□ 0.71
ERBB2-214ENST00000583038 CCDC141Q6ZP82 1450 aa19.51■□□□□ 0.71
ERBB2-214ENST00000583038 PRPF40AO75400 957 aaKnown RBP19.51■□□□□ 0.71
ERBB2-214ENST00000583038 HMGN5P82970 282 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms