RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
CDK5RAP3-224ENST00000582275 RRBP1Q9P2E9 1410 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-224ENST00000582275 NINLQ9Y2I6 1382 aa13.21□□□□□ -0.29
CDK5RAP3-224ENST00000582275 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
CDK5RAP3-224ENST00000582275 ABCA3Q99758 1704 aa13.21□□□□□ -0.3
CDK5RAP3-224ENST00000582275 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-224ENST00000582275 NRAPQ86VF7 1730 aa13.2□□□□□ -0.3
CDK5RAP3-224ENST00000582275 SPON1Q9HCB6 807 aa13.2□□□□□ -0.3
CDK5RAP3-224ENST00000582275 PLEKHH1Q9ULM0 1364 aa13.2□□□□□ -0.3
CDK5RAP3-224ENST00000582275 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-224ENST00000582275 ADGRF5Q8IZF2 1346 aa13.19□□□□□ -0.3
CDK5RAP3-224ENST00000582275 TRIM37O94972 964 aa13.19□□□□□ -0.3
CDK5RAP3-224ENST00000582275 APBA3O96018 575 aa13.19□□□□□ -0.3
CDK5RAP3-224ENST00000582275 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
CDK5RAP3-224ENST00000582275 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-224ENST00000582275 GPRASP1Q5JY77 1395 aa13.18□□□□□ -0.3
CDK5RAP3-224ENST00000582275 THSD7AQ9UPZ6 1657 aa13.18□□□□□ -0.3
CDK5RAP3-224ENST00000582275 IFT172Q9UG01 1749 aa13.17□□□□□ -0.3
CDK5RAP3-224ENST00000582275 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
CDK5RAP3-224ENST00000582275 TMEM132EQ6IEE7 984 aa13.17□□□□□ -0.3
CDK5RAP3-224ENST00000582275 KCNQ2O43526 872 aa13.16□□□□□ -0.3
CDK5RAP3-224ENST00000582275 C11orf95C9JLR9 678 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-224ENST00000582275 PRDM11Q9NQV5 511 aa13.15□□□□□ -0.3
CDK5RAP3-224ENST00000582275 EIF3AQ14152 1382 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-224ENST00000582275 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.31
CDK5RAP3-224ENST00000582275 SPATA31A1Q5TZJ5 1347 aa13.14□□□□□ -0.31
CDK5RAP3-224ENST00000582275 PIK3C2GO75747 1445 aa13.14□□□□□ -0.31
CDK5RAP3-224ENST00000582275 PDE3BQ13370 1112 aa13.14□□□□□ -0.31
CDK5RAP3-224ENST00000582275 DHX57Q6P158 1386 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-224ENST00000582275 RGL3Q3MIN7 710 aa13.13□□□□□ -0.31
CDK5RAP3-224ENST00000582275 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-224ENST00000582275 PMFBP1Q8TBY8 1022 aa13.13□□□□□ -0.31
CDK5RAP3-224ENST00000582275 RREB1Q92766 1687 aa13.12□□□□□ -0.31
CDK5RAP3-224ENST00000582275 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
CDK5RAP3-224ENST00000582275 C14orf93Q9H972 538 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-224ENST00000582275 POGKQ9P215 609 aa13.11□□□□□ -0.31
CDK5RAP3-224ENST00000582275 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
CDK5RAP3-224ENST00000582275 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
CDK5RAP3-224ENST00000582275 PRAM1Q96QH2 718 aa13.1□□□□□ -0.31
CDK5RAP3-224ENST00000582275 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
CDK5RAP3-224ENST00000582275 TRPM3Q9HCF6 1732 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-224ENST00000582275 ACIN1Q9UKV3 1341 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-224ENST00000582275 ALS2Q96Q42 1657 aa13.09□□□□□ -0.31
CDK5RAP3-224ENST00000582275 SENP3-EIF4A1A0A087X0R7 540 aa13.09□□□□□ -0.31
CDK5RAP3-224ENST00000582275 ZNF784Q8NCA9 323 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-224ENST00000582275 STRN4Q9NRL3 753 aa13.09□□□□□ -0.31
CDK5RAP3-224ENST00000582275 EVA1CP58658 441 aa13.08□□□□□ -0.32
CDK5RAP3-224ENST00000582275 SAFB2Q14151 953 aaKnown RBP eCLIP13.08□□□□□ -0.32
CDK5RAP3-224ENST00000582275 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-224ENST00000582275 NGDNQ8NEJ9 315 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-224ENST00000582275 DLC1Q96QB1 1528 aa13.07□□□□□ -0.32
CDK5RAP3-224ENST00000582275 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
CDK5RAP3-224ENST00000582275 TCP11L2Q8N4U5 519 aa13.06□□□□□ -0.32
CDK5RAP3-224ENST00000582275 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-224ENST00000582275 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-224ENST00000582275 C1QTNF8P60827 252 aa13.05□□□□□ -0.32
CDK5RAP3-224ENST00000582275 USP35Q9P2H5 1018 aa13.05□□□□□ -0.32
CDK5RAP3-224ENST00000582275 PLSCR1O15162 318 aa13.04□□□□□ -0.32
CDK5RAP3-224ENST00000582275 CHRNA2Q15822 529 aa13.04□□□□□ -0.32
CDK5RAP3-224ENST00000582275 CRYBG1Q9Y4K1 1723 aa13.04□□□□□ -0.32
CDK5RAP3-224ENST00000582275 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
CDK5RAP3-224ENST00000582275 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
CDK5RAP3-224ENST00000582275 CFAP70Q5T0N1 1121 aa13.03□□□□□ -0.32
CDK5RAP3-224ENST00000582275 ATP7BP35670 1465 aa13.03□□□□□ -0.32
CDK5RAP3-224ENST00000582275 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-224ENST00000582275 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.33
CDK5RAP3-224ENST00000582275 WASLO00401 505 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-224ENST00000582275 ZC3H6P61129 1189 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-224ENST00000582275 CHD4Q14839 1912 aa13□□□□□ -0.33
CDK5RAP3-224ENST00000582275 CAMTA1Q9Y6Y1 1673 aa13□□□□□ -0.33
CDK5RAP3-224ENST00000582275 OVOS2A0A0G2JMS6 1433 aa13□□□□□ -0.33
CDK5RAP3-224ENST00000582275 OVOS2A0A0J9YW53 1432 aa13□□□□□ -0.33
CDK5RAP3-224ENST00000582275 OVOS2Q6IE36 1432 aa13□□□□□ -0.33
CDK5RAP3-224ENST00000582275 PRR36Q9H6K5 1346 aa13□□□□□ -0.33
CDK5RAP3-224ENST00000582275 CAPN15O75808 1086 aa13□□□□□ -0.33
CDK5RAP3-224ENST00000582275 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-224ENST00000582275 NRKQ7Z2Y5 1582 aa12.99□□□□□ -0.33
CDK5RAP3-224ENST00000582275 MINK1Q8N4C8 1332 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-224ENST00000582275 LARP1Q6PKG0 1096 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-224ENST00000582275 MPHOSPH9Q99550 1183 aa12.99□□□□□ -0.33
CDK5RAP3-224ENST00000582275 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-224ENST00000582275 CPDO75976 1380 aa12.98□□□□□ -0.33
CDK5RAP3-224ENST00000582275 PHRF1Q9P1Y6 1649 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-224ENST00000582275 CASZ1Q86V15 1759 aa12.97□□□□□ -0.33
CDK5RAP3-224ENST00000582275 PTGER2P43116 358 aa12.97□□□□□ -0.33
CDK5RAP3-224ENST00000582275 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
CDK5RAP3-224ENST00000582275 TRAK1Q9UPV9 953 aa12.97□□□□□ -0.33
CDK5RAP3-224ENST00000582275 ITSN1Q15811 1721 aa12.96□□□□□ -0.33
CDK5RAP3-224ENST00000582275 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-224ENST00000582275 ZBTB7AO95365 584 aa12.96□□□□□ -0.33
CDK5RAP3-224ENST00000582275 FHDC1Q9C0D6 1143 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-224ENST00000582275 ANO8Q9HCE9 1232 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-224ENST00000582275 STK32BQ9NY57 414 aa12.96□□□□□ -0.33
CDK5RAP3-224ENST00000582275 GIGYF1O75420 1035 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-224ENST00000582275 PPARGC1BQ86YN6 1023 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-224ENST00000582275 MTFR1LQ9H019 292 aa12.95□□□□□ -0.34
CDK5RAP3-224ENST00000582275 MYOM1P52179 1685 aa12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 DDB1Q16531 1140 aa12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 NLRP13Q86W25 1043 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms