RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SLIT2O94813 1529 aa17.37■□□□□ 0.37
SRSF1-204ENST00000581979 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.36■□□□□ 0.37
SRSF1-204ENST00000581979 ATP7BP35670 1465 aa17.36■□□□□ 0.37
SRSF1-204ENST00000581979 TMF1P82094 1093 aa17.35■□□□□ 0.37
SRSF1-204ENST00000581979 TESK2Q96S53 571 aa17.35■□□□□ 0.37
SRSF1-204ENST00000581979 CABLES1Q8TDN4 633 aa17.35■□□□□ 0.37
SRSF1-204ENST00000581979 ABCA3Q99758 1704 aa17.35■□□□□ 0.37
SRSF1-204ENST00000581979 ANP32CO43423 234 aa17.34■□□□□ 0.37
SRSF1-204ENST00000581979 ITSN1Q15811 1721 aa17.34■□□□□ 0.37
SRSF1-204ENST00000581979 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
SRSF1-204ENST00000581979 NUDT16Q96DE0 195 aaKnown RBP17.34■□□□□ 0.37
SRSF1-204ENST00000581979 ALS2Q96Q42 1657 aa17.34■□□□□ 0.37
SRSF1-204ENST00000581979 LMOD2Q6P5Q4 547 aa17.33■□□□□ 0.37
SRSF1-204ENST00000581979 CDK19Q9BWU1 502 aa17.33■□□□□ 0.37
SRSF1-204ENST00000581979 HAP1P54257 671 aaPredicted RBP17.33■□□□□ 0.36
SRSF1-204ENST00000581979 NGDNQ8NEJ9 315 aaKnown RBP17.33■□□□□ 0.36
SRSF1-204ENST00000581979 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.36
SRSF1-204ENST00000581979 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
SRSF1-204ENST00000581979 NWD2Q9ULI1 1742 aa17.3■□□□□ 0.36
SRSF1-204ENST00000581979 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
SRSF1-204ENST00000581979 CCDC61Q9Y6R9 512 aa17.3■□□□□ 0.36
SRSF1-204ENST00000581979 TOPAZ1Q8N9V7 1692 aa17.3■□□□□ 0.36
SRSF1-204ENST00000581979 POLR3AO14802 1390 aaPredicted RBP17.29■□□□□ 0.36
SRSF1-204ENST00000581979 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
SRSF1-204ENST00000581979 ATAD2Q6PL18 1390 aa17.29■□□□□ 0.36
SRSF1-204ENST00000581979 PLCH1Q4KWH8 1693 aa17.28■□□□□ 0.36
SRSF1-204ENST00000581979 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
SRSF1-204ENST00000581979 GLI3P10071 1580 aa17.28■□□□□ 0.36
SRSF1-204ENST00000581979 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.36
SRSF1-204ENST00000581979 FAM83GA6ND36 823 aa17.27■□□□□ 0.36
SRSF1-204ENST00000581979 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
SRSF1-204ENST00000581979 VPS72Q15906 364 aa17.27■□□□□ 0.35
SRSF1-204ENST00000581979 CRYBG1Q9Y4K1 1723 aa17.26■□□□□ 0.35
SRSF1-204ENST00000581979 SBNO2Q9Y2G9 1366 aa17.26■□□□□ 0.35
SRSF1-204ENST00000581979 ACEP12821 1306 aa17.25■□□□□ 0.35
SRSF1-204ENST00000581979 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
SRSF1-204ENST00000581979 EP400Q96L91 3159 aa17.24■□□□□ 0.35
SRSF1-204ENST00000581979 ONECUT3O60422 494 aaPredicted RBP17.23■□□□□ 0.35
SRSF1-204ENST00000581979 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
SRSF1-204ENST00000581979 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
SRSF1-204ENST00000581979 NRAPQ86VF7 1730 aa17.23■□□□□ 0.35
SRSF1-204ENST00000581979 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.35
SRSF1-204ENST00000581979 CABP2Q9NPB3 220 aa17.21■□□□□ 0.35
SRSF1-204ENST00000581979 BTG4Q9NY30 223 aa17.21■□□□□ 0.35
SRSF1-204ENST00000581979 MYOM1P52179 1685 aa17.21■□□□□ 0.34
SRSF1-204ENST00000581979 CCER2I3L3R5 266 aa17.19■□□□□ 0.34
SRSF1-204ENST00000581979 CCDC125Q86Z20 511 aa17.18■□□□□ 0.34
SRSF1-204ENST00000581979 CCDC9Q9Y3X0 531 aaKnown RBP17.18■□□□□ 0.34
SRSF1-204ENST00000581979 PHRF1Q9P1Y6 1649 aaKnown RBP17.18■□□□□ 0.34
SRSF1-204ENST00000581979 BRD4O60885 1362 aaPredicted RBP17.18■□□□□ 0.34
SRSF1-204ENST00000581979 BRWD3Q6RI45 1802 aa17.18■□□□□ 0.34
SRSF1-204ENST00000581979 SEPT12Q8IYM1 358 aa17.18■□□□□ 0.34
SRSF1-204ENST00000581979 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
SRSF1-204ENST00000581979 EVC2Q86UK5 1308 aa17.18■□□□□ 0.34
SRSF1-204ENST00000581979 PRKRIP1Q9H875 184 aaPredicted RBP17.17■□□□□ 0.34
SRSF1-204ENST00000581979 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
SRSF1-204ENST00000581979 NUTM2GQ5VZR2 741 aa17.16■□□□□ 0.34
SRSF1-204ENST00000581979 ABTB2Q8N961 1025 aa17.16■□□□□ 0.34
SRSF1-204ENST00000581979 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
SRSF1-204ENST00000581979 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
SRSF1-204ENST00000581979 PANK3Q9H999 370 aa17.16■□□□□ 0.34
SRSF1-204ENST00000581979 USP19O94966 1318 aa17.16■□□□□ 0.34
SRSF1-204ENST00000581979 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
SRSF1-204ENST00000581979 USP6P35125 1406 aa17.14■□□□□ 0.33
SRSF1-204ENST00000581979 SPATA31A5Q5VU36 1347 aa17.14■□□□□ 0.33
SRSF1-204ENST00000581979 SPATA31A7Q8IWB4 1347 aa17.14■□□□□ 0.33
SRSF1-204ENST00000581979 NRKQ7Z2Y5 1582 aa17.14■□□□□ 0.33
SRSF1-204ENST00000581979 CPDO75976 1380 aa17.13■□□□□ 0.33
SRSF1-204ENST00000581979 ZC3H6P61129 1189 aaKnown RBP17.13■□□□□ 0.33
SRSF1-204ENST00000581979 NLRP13Q86W25 1043 aa17.13■□□□□ 0.33
SRSF1-204ENST00000581979 BLMP54132 1417 aaPredicted RBP17.12■□□□□ 0.33
SRSF1-204ENST00000581979 SSH2Q76I76 1423 aa17.12■□□□□ 0.33
SRSF1-204ENST00000581979 CHRNA2Q15822 529 aa17.12■□□□□ 0.33
SRSF1-204ENST00000581979 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
SRSF1-204ENST00000581979 KRT27Q7Z3Y8 459 aa17.12■□□□□ 0.33
SRSF1-204ENST00000581979 PUS7Q96PZ0 661 aaKnown RBP17.11■□□□□ 0.33
SRSF1-204ENST00000581979 PER1O15534 1290 aaPredicted RBP17.1■□□□□ 0.33
SRSF1-204ENST00000581979 GCP02774 474 aa17.1■□□□□ 0.33
SRSF1-204ENST00000581979 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
SRSF1-204ENST00000581979 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
SRSF1-204ENST00000581979 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
SRSF1-204ENST00000581979 LMO7Q8WWI1 1683 aa17.09■□□□□ 0.33
SRSF1-204ENST00000581979 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
SRSF1-204ENST00000581979 KTN1Q86UP2 1357 aaKnown RBP17.09■□□□□ 0.33
SRSF1-204ENST00000581979 CAMTA1Q9Y6Y1 1673 aa17.08■□□□□ 0.32
SRSF1-204ENST00000581979 A0A0G2JS52 829 aa17.07■□□□□ 0.32
SRSF1-204ENST00000581979 MYT1Q01538 1121 aa17.07■□□□□ 0.32
SRSF1-204ENST00000581979 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
SRSF1-204ENST00000581979 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
SRSF1-204ENST00000581979 CPSF1Q10570 1443 aaKnown RBP17.07■□□□□ 0.32
SRSF1-204ENST00000581979 SLIT3O75094 1523 aa17.07■□□□□ 0.32
SRSF1-204ENST00000581979 NLRP6P59044 892 aa17.07■□□□□ 0.32
SRSF1-204ENST00000581979 RALBP1Q15311 655 aa17.07■□□□□ 0.32
SRSF1-204ENST00000581979 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
SRSF1-204ENST00000581979 PIK3C2AO00443 1686 aa17.06■□□□□ 0.32
SRSF1-204ENST00000581979 TTC21BQ7Z4L5 1316 aa17.05■□□□□ 0.32
SRSF1-204ENST00000581979 EVA1CP58658 441 aa17.04■□□□□ 0.32
SRSF1-204ENST00000581979 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
SRSF1-204ENST00000581979 SLC12A5Q9H2X9 1139 aa17.04■□□□□ 0.32
SRSF1-204ENST00000581979 BARGINQ6ZT62 677 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms