RNA–Protein interactions for RNA: ENST00000581356.1

SLC9A3R1-204, Transcript of SLC9A3 regulator 1, humanhuman

TSL 3

Gene SLC9A3R1, Length 519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-204ENST00000581356 ATRNO75882 1429 aa18.05■□□□□ 0.48
SLC9A3R1-204ENST00000581356 PPIP5K1Q6PFW1 1433 aa18.05■□□□□ 0.48
SLC9A3R1-204ENST00000581356 RALGAPBQ86X10 1494 aa18.03■□□□□ 0.48
SLC9A3R1-204ENST00000581356 FAM83GA6ND36 823 aa18.03■□□□□ 0.48
SLC9A3R1-204ENST00000581356 UNC5CLQ8IV45 518 aa18.03■□□□□ 0.48
SLC9A3R1-204ENST00000581356 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
SLC9A3R1-204ENST00000581356 SLIT2O94813 1529 aa18.03■□□□□ 0.48
SLC9A3R1-204ENST00000581356 RGS12O14924 1447 aa18.02■□□□□ 0.48
SLC9A3R1-204ENST00000581356 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.48
SLC9A3R1-204ENST00000581356 ABCA3Q99758 1704 aa18.02■□□□□ 0.48
SLC9A3R1-204ENST00000581356 GJD4Q96KN9 370 aaPredicted RBP18■□□□□ 0.47
SLC9A3R1-204ENST00000581356 ABTB2Q8N961 1025 aa17.99■□□□□ 0.47
SLC9A3R1-204ENST00000581356 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.96■□□□□ 0.47
SLC9A3R1-204ENST00000581356 UPF1Q92900 1129 aaKnown RBP eCLIP17.96■□□□□ 0.473e-12■□□□□ 8.7
SLC9A3R1-204ENST00000581356 BTG4Q9NY30 223 aa17.96■□□□□ 0.47
SLC9A3R1-204ENST00000581356 SBNO2Q9Y2G9 1366 aa17.95■□□□□ 0.46
SLC9A3R1-204ENST00000581356 VPS72Q15906 364 aa17.95■□□□□ 0.46
SLC9A3R1-204ENST00000581356 PRDM11Q9NQV5 511 aa17.95■□□□□ 0.46
SLC9A3R1-204ENST00000581356 CCDC9Q9Y3X0 531 aaKnown RBP17.95■□□□□ 0.46
SLC9A3R1-204ENST00000581356 PLCH1Q4KWH8 1693 aa17.95■□□□□ 0.46
SLC9A3R1-204ENST00000581356 CRYBG1Q9Y4K1 1723 aa17.95■□□□□ 0.46
SLC9A3R1-204ENST00000581356 ATAD2Q6PL18 1390 aa17.94■□□□□ 0.46
SLC9A3R1-204ENST00000581356 ZC3H6P61129 1189 aaKnown RBP17.94■□□□□ 0.46
SLC9A3R1-204ENST00000581356 USP6P35125 1406 aa17.94■□□□□ 0.46
SLC9A3R1-204ENST00000581356 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
SLC9A3R1-204ENST00000581356 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
SLC9A3R1-204ENST00000581356 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
SLC9A3R1-204ENST00000581356 NWD2Q9ULI1 1742 aa17.93■□□□□ 0.46
SLC9A3R1-204ENST00000581356 NLRP13Q86W25 1043 aa17.93■□□□□ 0.46
SLC9A3R1-204ENST00000581356 GLI3P10071 1580 aa17.92■□□□□ 0.46
SLC9A3R1-204ENST00000581356 ST20-MTHFSA0A0A6YYL1 179 aa17.92■□□□□ 0.46
SLC9A3R1-204ENST00000581356 CHRNA2Q15822 529 aa17.92■□□□□ 0.46
SLC9A3R1-204ENST00000581356 ZNF692Q9BU19 519 aaPredicted RBP17.92■□□□□ 0.46
SLC9A3R1-204ENST00000581356 COL14A1Q05707 1796 aaKnown RBP17.91■□□□□ 0.46
SLC9A3R1-204ENST00000581356 NLRP6P59044 892 aa17.91■□□□□ 0.46
SLC9A3R1-204ENST00000581356 TIMELESSQ9UNS1 1208 aa17.91■□□□□ 0.46
SLC9A3R1-204ENST00000581356 USP19O94966 1318 aa17.91■□□□□ 0.46
SLC9A3R1-204ENST00000581356 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
SLC9A3R1-204ENST00000581356 SSH2Q76I76 1423 aa17.9■□□□□ 0.46
SLC9A3R1-204ENST00000581356 GCP02774 474 aa17.89■□□□□ 0.45
SLC9A3R1-204ENST00000581356 CCER1Q8TC90 406 aaPredicted RBP17.89■□□□□ 0.45
SLC9A3R1-204ENST00000581356 TMC1Q8TDI8 760 aa17.89■□□□□ 0.45
SLC9A3R1-204ENST00000581356 TESK2Q96S53 571 aa17.89■□□□□ 0.45
SLC9A3R1-204ENST00000581356 SEPT12Q8IYM1 358 aa17.88■□□□□ 0.45
SLC9A3R1-204ENST00000581356 TTC21BQ7Z4L5 1316 aa17.88■□□□□ 0.45
SLC9A3R1-204ENST00000581356 KTN1Q86UP2 1357 aaKnown RBP17.88■□□□□ 0.45
SLC9A3R1-204ENST00000581356 CPSF1Q10570 1443 aaKnown RBP17.88■□□□□ 0.45
SLC9A3R1-204ENST00000581356 NRAPQ86VF7 1730 aa17.87■□□□□ 0.45
SLC9A3R1-204ENST00000581356 SLC12A5Q9H2X9 1139 aa17.87■□□□□ 0.45
SLC9A3R1-204ENST00000581356 ONECUT3O60422 494 aaPredicted RBP17.86■□□□□ 0.45
SLC9A3R1-204ENST00000581356 STRN4Q9NRL3 753 aa17.86■□□□□ 0.45
SLC9A3R1-204ENST00000581356 NRKQ7Z2Y5 1582 aa17.86■□□□□ 0.45
SLC9A3R1-204ENST00000581356 CPDO75976 1380 aa17.85■□□□□ 0.45
SLC9A3R1-204ENST00000581356 AKAP12Q02952 1782 aa17.85■□□□□ 0.45
SLC9A3R1-204ENST00000581356 FAM98CQ17RN3 349 aaKnown RBP17.85■□□□□ 0.45
SLC9A3R1-204ENST00000581356 USP47Q96K76 1375 aa17.85■□□□□ 0.45
SLC9A3R1-204ENST00000581356 PUS7Q96PZ0 661 aaKnown RBP17.85■□□□□ 0.45
SLC9A3R1-204ENST00000581356 SPATA31A5Q5VU36 1347 aa17.84■□□□□ 0.45
SLC9A3R1-204ENST00000581356 SPATA31A7Q8IWB4 1347 aa17.84■□□□□ 0.45
SLC9A3R1-204ENST00000581356 TTC21AQ8NDW8 1320 aa17.84■□□□□ 0.45
SLC9A3R1-204ENST00000581356 A0A0G2JS52 829 aa17.84■□□□□ 0.45
SLC9A3R1-204ENST00000581356 ZBTB7CA1YPR0 619 aa17.84■□□□□ 0.45
SLC9A3R1-204ENST00000581356 EVA1CP58658 441 aa17.84■□□□□ 0.45
SLC9A3R1-204ENST00000581356 MYT1Q01538 1121 aa17.84■□□□□ 0.45
SLC9A3R1-204ENST00000581356 PIK3C2AO00443 1686 aa17.83■□□□□ 0.45
SLC9A3R1-204ENST00000581356 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
SLC9A3R1-204ENST00000581356 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
SLC9A3R1-204ENST00000581356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.83■□□□□ 0.44
SLC9A3R1-204ENST00000581356 CD163L1Q9NR16 1453 aa17.82■□□□□ 0.44
SLC9A3R1-204ENST00000581356 CAMTA1Q9Y6Y1 1673 aa17.81■□□□□ 0.44
SLC9A3R1-204ENST00000581356 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
SLC9A3R1-204ENST00000581356 SLIT3O75094 1523 aa17.81■□□□□ 0.44
SLC9A3R1-204ENST00000581356 SPATA31A1Q5TZJ5 1347 aa17.8■□□□□ 0.44
SLC9A3R1-204ENST00000581356 SOX12O15370 315 aa17.8■□□□□ 0.44
SLC9A3R1-204ENST00000581356 KRT27Q7Z3Y8 459 aa17.8■□□□□ 0.44
SLC9A3R1-204ENST00000581356 ZRANB1Q9UGI0 708 aa17.8■□□□□ 0.44
SLC9A3R1-204ENST00000581356 BRWD3Q6RI45 1802 aa17.79■□□□□ 0.44
SLC9A3R1-204ENST00000581356 MON2Q7Z3U7 1717 aa17.79■□□□□ 0.44
SLC9A3R1-204ENST00000581356 TMF1P82094 1093 aa17.79■□□□□ 0.44
SLC9A3R1-204ENST00000581356 LARP1Q6PKG0 1096 aaKnown RBP17.79■□□□□ 0.44
SLC9A3R1-204ENST00000581356 NME9Q86XW9 330 aa17.79■□□□□ 0.44
SLC9A3R1-204ENST00000581356 KCNH5Q8NCM2 988 aa17.79■□□□□ 0.44
SLC9A3R1-204ENST00000581356 USP35Q9P2H5 1018 aa17.79■□□□□ 0.44
SLC9A3R1-204ENST00000581356 A0A1W2PP64 1363 aa17.79■□□□□ 0.44
SLC9A3R1-204ENST00000581356 LMO7Q8WWI1 1683 aa17.78■□□□□ 0.44
SLC9A3R1-204ENST00000581356 AATKQ6ZMQ8 1374 aa17.77■□□□□ 0.43
SLC9A3R1-204ENST00000581356 EDC4Q6P2E9 1401 aaKnown RBP17.76■□□□□ 0.43
SLC9A3R1-204ENST00000581356 ARHGEF25Q86VW2 580 aa17.76■□□□□ 0.43
SLC9A3R1-204ENST00000581356 CCDC125Q86Z20 511 aa17.76■□□□□ 0.43
SLC9A3R1-204ENST00000581356 EP400Q96L91 3159 aa17.76■□□□□ 0.43
SLC9A3R1-204ENST00000581356 NINLQ9Y2I6 1382 aa17.76■□□□□ 0.43
SLC9A3R1-204ENST00000581356 AXIN2Q9Y2T1 843 aa17.75■□□□□ 0.43
SLC9A3R1-204ENST00000581356 USP31Q70CQ4 1352 aa17.75■□□□□ 0.43
SLC9A3R1-204ENST00000581356 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
SLC9A3R1-204ENST00000581356 CDCA8Q53HL2 280 aa17.73■□□□□ 0.43
SLC9A3R1-204ENST00000581356 FAM182BQ5T319 152 aa17.73■□□□□ 0.43
SLC9A3R1-204ENST00000581356 BARGINQ6ZT62 677 aa17.73■□□□□ 0.43
SLC9A3R1-204ENST00000581356 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
SLC9A3R1-204ENST00000581356 THSD7AQ9UPZ6 1657 aa17.72■□□□□ 0.43
SLC9A3R1-204ENST00000581356 NFAT5O94916 1531 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms