RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 HNRNPUQ00839 825 aaKnown RBP eCLIP10.01□□□□□ -0.81
TVP23C-208ENST00000581273 SPON1Q9HCB6 807 aa10.01□□□□□ -0.81
TVP23C-208ENST00000581273 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
TVP23C-208ENST00000581273 PRELPP51888 382 aa10□□□□□ -0.81
TVP23C-208ENST00000581273 GLIPR1L2Q4G1C9 344 aa10□□□□□ -0.81
TVP23C-208ENST00000581273 ZNF326Q5BKZ1 582 aaKnown RBP10□□□□□ -0.81
TVP23C-208ENST00000581273 COL13A1Q5TAT6 717 aaPredicted RBP10□□□□□ -0.81
TVP23C-208ENST00000581273 SPDYE1Q8NFV5 336 aaPredicted RBP10□□□□□ -0.81
TVP23C-208ENST00000581273 TRPM2O94759 1503 aa10□□□□□ -0.81
TVP23C-208ENST00000581273 PTPRUQ92729 1446 aa9.99□□□□□ -0.81
TVP23C-208ENST00000581273 KCNQ2O43526 872 aa9.99□□□□□ -0.81
TVP23C-208ENST00000581273 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
TVP23C-208ENST00000581273 MARF1Q9Y4F3 1742 aaKnown RBP9.99□□□□□ -0.81
TVP23C-208ENST00000581273 FAM182BQ5T319 152 aa9.98□□□□□ -0.81
TVP23C-208ENST00000581273 CCDC136Q96JN2 1154 aa9.98□□□□□ -0.81
TVP23C-208ENST00000581273 WASHC2AQ641Q2 1341 aa9.98□□□□□ -0.81
TVP23C-208ENST00000581273 RGPD1P0DJD0 1748 aa9.98□□□□□ -0.81
TVP23C-208ENST00000581273 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.98□□□□□ -0.81
TVP23C-208ENST00000581273 PIK3R4Q99570 1358 aa9.98□□□□□ -0.81
TVP23C-208ENST00000581273 NBR1Q14596 966 aa9.97□□□□□ -0.81
TVP23C-208ENST00000581273 UNC5CLQ8IV45 518 aa9.97□□□□□ -0.81
TVP23C-208ENST00000581273 ZBED9Q6R2W3 1325 aa9.97□□□□□ -0.81
TVP23C-208ENST00000581273 NUP155O75694 1391 aa9.97□□□□□ -0.81
TVP23C-208ENST00000581273 TONSLQ96HA7 1378 aa9.97□□□□□ -0.81
TVP23C-208ENST00000581273 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
TVP23C-208ENST00000581273 RSPH6AQ9H0K4 717 aa9.96□□□□□ -0.82
TVP23C-208ENST00000581273 IQGAP3Q86VI3 1631 aa9.96□□□□□ -0.82
TVP23C-208ENST00000581273 TNS1Q9HBL0 1735 aaKnown RBP9.96□□□□□ -0.82
TVP23C-208ENST00000581273 A0A0G2JS52 829 aa9.95□□□□□ -0.82
TVP23C-208ENST00000581273 DDRGK1Q96HY6 314 aa9.95□□□□□ -0.82
TVP23C-208ENST00000581273 CAMKK2Q96RR4 588 aa9.95□□□□□ -0.82
TVP23C-208ENST00000581273 XRN1Q8IZH2 1706 aaKnown RBP9.95□□□□□ -0.82
TVP23C-208ENST00000581273 NRXN3Q9Y4C0 1643 aa9.94□□□□□ -0.82
TVP23C-208ENST00000581273 MYOM2P54296 1465 aa9.94□□□□□ -0.82
TVP23C-208ENST00000581273 METP08581 1390 aa9.94□□□□□ -0.82
TVP23C-208ENST00000581273 HSPA6P17066 643 aa9.94□□□□□ -0.82
TVP23C-208ENST00000581273 TNS4Q8IZW8 715 aa9.94□□□□□ -0.82
TVP23C-208ENST00000581273 SPOCK2Q92563 424 aa9.94□□□□□ -0.82
TVP23C-208ENST00000581273 SALL2Q9Y467 1007 aaPredicted RBP9.94□□□□□ -0.82
TVP23C-208ENST00000581273 COL22A1Q8NFW1 1626 aaPredicted RBP9.93□□□□□ -0.82
TVP23C-208ENST00000581273 NRKQ7Z2Y5 1582 aa9.93□□□□□ -0.82
TVP23C-208ENST00000581273 DISP2A7MBM2 1401 aa9.93□□□□□ -0.82
TVP23C-208ENST00000581273 DCCP43146 1447 aa9.93□□□□□ -0.82
TVP23C-208ENST00000581273 SOS2Q07890 1332 aaPredicted RBP9.93□□□□□ -0.82
TVP23C-208ENST00000581273 CCDC9Q9Y3X0 531 aaKnown RBP9.93□□□□□ -0.82
TVP23C-208ENST00000581273 NALCNQ8IZF0 1738 aa9.93□□□□□ -0.82
TVP23C-208ENST00000581273 SLIT2O94813 1529 aa9.92□□□□□ -0.82
TVP23C-208ENST00000581273 SHANK3Q9BYB0 1731 aa9.91□□□□□ -0.82
TVP23C-208ENST00000581273 TCERG1O14776 1098 aaKnown RBP9.91□□□□□ -0.82
TVP23C-208ENST00000581273 KLHL34Q8N239 644 aa9.91□□□□□ -0.82
TVP23C-208ENST00000581273 ORAI2Q96SN7 254 aa9.91□□□□□ -0.82
TVP23C-208ENST00000581273 KIF1BO60333 1816 aa9.91□□□□□ -0.82
TVP23C-208ENST00000581273 ADGRL3Q9HAR2 1447 aa9.9□□□□□ -0.82
TVP23C-208ENST00000581273 NUP188Q5SRE5 1749 aa9.9□□□□□ -0.82
TVP23C-208ENST00000581273 ROCK1Q13464 1354 aa9.9□□□□□ -0.82
TVP23C-208ENST00000581273 MYOM1P52179 1685 aa9.9□□□□□ -0.82
TVP23C-208ENST00000581273 ONECUT3O60422 494 aaPredicted RBP9.9□□□□□ -0.82
TVP23C-208ENST00000581273 MS4A1P11836 297 aa9.9□□□□□ -0.82
TVP23C-208ENST00000581273 SMG6Q86US8 1419 aaKnown RBP9.9□□□□□ -0.83
TVP23C-208ENST00000581273 C1orf167Q5SNV9 1468 aa9.89□□□□□ -0.83
TVP23C-208ENST00000581273 RREB1Q92766 1687 aa9.88□□□□□ -0.83
TVP23C-208ENST00000581273 PLEKHG5O94827 1062 aa9.88□□□□□ -0.83
TVP23C-208ENST00000581273 TRIM37O94972 964 aa9.88□□□□□ -0.83
TVP23C-208ENST00000581273 VPS72Q15906 364 aa9.88□□□□□ -0.83
TVP23C-208ENST00000581273 NBPF8Q3BBV2 869 aa9.88□□□□□ -0.83
TVP23C-208ENST00000581273 NBPF14Q5TI25 921 aa9.88□□□□□ -0.83
TVP23C-208ENST00000581273 SYT17Q9BSW7 474 aa9.88□□□□□ -0.83
TVP23C-208ENST00000581273 FHDC1Q9C0D6 1143 aaPredicted RBP9.88□□□□□ -0.83
TVP23C-208ENST00000581273 LAMC1P11047 1609 aa9.88□□□□□ -0.83
TVP23C-208ENST00000581273 CLTCL1P53675 1640 aa9.88□□□□□ -0.83
TVP23C-208ENST00000581273 FAM83GA6ND36 823 aa9.87□□□□□ -0.83
TVP23C-208ENST00000581273 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
TVP23C-208ENST00000581273 APBA3O96018 575 aa9.87□□□□□ -0.83
TVP23C-208ENST00000581273 XPCQ01831 940 aaPredicted RBP9.87□□□□□ -0.83
TVP23C-208ENST00000581273 FAM98CQ17RN3 349 aaKnown RBP9.87□□□□□ -0.83
TVP23C-208ENST00000581273 B4GALNT3Q6L9W6 998 aa9.87□□□□□ -0.83
TVP23C-208ENST00000581273 NEXMIFQ5QGS0 1516 aa9.87□□□□□ -0.83
TVP23C-208ENST00000581273 PITPNM1O00562 1244 aa9.86□□□□□ -0.83
TVP23C-208ENST00000581273 NEFMP07197 916 aa9.86□□□□□ -0.83
TVP23C-208ENST00000581273 ESCO1Q5FWF5 840 aa9.86□□□□□ -0.83
TVP23C-208ENST00000581273 ROBO2Q9HCK4 1378 aa9.86□□□□□ -0.83
TVP23C-208ENST00000581273 RNF123Q5XPI4 1314 aa9.85□□□□□ -0.83
TVP23C-208ENST00000581273 GOLGB1Q14789 3259 aaKnown RBP9.85□□□□□ -0.83
TVP23C-208ENST00000581273 ADGRB2O60241 1585 aa9.85□□□□□ -0.83
TVP23C-208ENST00000581273 NUTM2FA1L443 756 aa9.85□□□□□ -0.83
TVP23C-208ENST00000581273 ZBTB7AO95365 584 aa9.85□□□□□ -0.83
TVP23C-208ENST00000581273 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
TVP23C-208ENST00000581273 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
TVP23C-208ENST00000581273 FAM43AQ8N2R8 423 aa9.85□□□□□ -0.83
TVP23C-208ENST00000581273 PDGFDQ9GZP0 370 aaPredicted RBP9.85□□□□□ -0.83
TVP23C-208ENST00000581273 CLEC11AQ9Y240 323 aa9.85□□□□□ -0.83
TVP23C-208ENST00000581273 VGFO15240 615 aaPredicted RBP9.84□□□□□ -0.83
TVP23C-208ENST00000581273 PTGER2P43116 358 aa9.84□□□□□ -0.83
TVP23C-208ENST00000581273 SIN3AQ96ST3 1273 aa9.84□□□□□ -0.83
TVP23C-208ENST00000581273 CREBZFQ9NS37 354 aa9.84□□□□□ -0.83
TVP23C-208ENST00000581273 STK26Q9P289 416 aa9.84□□□□□ -0.83
TVP23C-208ENST00000581273 NUDCQ9Y266 331 aa9.84□□□□□ -0.83
TVP23C-208ENST00000581273 FOXO3O43524 673 aa9.83□□□□□ -0.84
TVP23C-208ENST00000581273 EIF4G2P78344 907 aaKnown RBP eCLIP9.83□□□□□ -0.84
TVP23C-208ENST00000581273 GSE1Q14687 1217 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms