RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 LRRC59Q96AG4 307 aaKnown RBP12.36□□□□□ -0.43
SUPT4H1-206ENST00000581204 USP21Q9UK80 565 aa12.36□□□□□ -0.43
SUPT4H1-206ENST00000581204 TBX22Q9Y458 520 aa12.36□□□□□ -0.43
SUPT4H1-206ENST00000581204 PTPRUQ92729 1446 aa12.36□□□□□ -0.43
SUPT4H1-206ENST00000581204 ADAMTS2O95450 1211 aa12.35□□□□□ -0.43
SUPT4H1-206ENST00000581204 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
SUPT4H1-206ENST00000581204 C14orf37Q86TY3 774 aa12.35□□□□□ -0.43
SUPT4H1-206ENST00000581204 TMEM106CQ9BVX2 250 aa12.35□□□□□ -0.43
SUPT4H1-206ENST00000581204 ERBINQ96RT1 1412 aa12.35□□□□□ -0.43
SUPT4H1-206ENST00000581204 RIMS2Q9UQ26 1411 aa12.35□□□□□ -0.43
SUPT4H1-206ENST00000581204 ADGRL2O95490 1459 aa12.34□□□□□ -0.43
SUPT4H1-206ENST00000581204 TRPM2O94759 1503 aa12.34□□□□□ -0.43
SUPT4H1-206ENST00000581204 PTCH1Q13635 1447 aa12.34□□□□□ -0.43
SUPT4H1-206ENST00000581204 UNC13BO14795 1591 aa12.34□□□□□ -0.43
SUPT4H1-206ENST00000581204 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
SUPT4H1-206ENST00000581204 TMEM131LA2VDJ0 1609 aa12.33□□□□□ -0.43
SUPT4H1-206ENST00000581204 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.43
SUPT4H1-206ENST00000581204 PIK3R4Q99570 1358 aa12.33□□□□□ -0.44
SUPT4H1-206ENST00000581204 CLCN6P51797 869 aa12.33□□□□□ -0.44
SUPT4H1-206ENST00000581204 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
SUPT4H1-206ENST00000581204 ACIN1Q9UKV3 1341 aaKnown RBP12.33□□□□□ -0.44
SUPT4H1-206ENST00000581204 SPHKAPQ2M3C7 1700 aa12.32□□□□□ -0.44
SUPT4H1-206ENST00000581204 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
SUPT4H1-206ENST00000581204 DHX57Q6P158 1386 aaKnown RBP12.31□□□□□ -0.44
SUPT4H1-206ENST00000581204 GLI3P10071 1580 aa12.31□□□□□ -0.44
SUPT4H1-206ENST00000581204 TIE1P35590 1138 aa12.31□□□□□ -0.44
SUPT4H1-206ENST00000581204 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
SUPT4H1-206ENST00000581204 KIF15Q9NS87 1388 aa12.3□□□□□ -0.44
SUPT4H1-206ENST00000581204 BRWD3Q6RI45 1802 aa12.3□□□□□ -0.44
SUPT4H1-206ENST00000581204 MYOM2P54296 1465 aa12.3□□□□□ -0.44
SUPT4H1-206ENST00000581204 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
SUPT4H1-206ENST00000581204 PPP1R37O75864 691 aa12.3□□□□□ -0.44
SUPT4H1-206ENST00000581204 YY1P25490 414 aa12.3□□□□□ -0.44
SUPT4H1-206ENST00000581204 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.29□□□□□ -0.44
SUPT4H1-206ENST00000581204 KCNV2Q8TDN2 545 aa12.29□□□□□ -0.44
SUPT4H1-206ENST00000581204 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
SUPT4H1-206ENST00000581204 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
SUPT4H1-206ENST00000581204 SLC52A1Q9NWF4 448 aa12.28□□□□□ -0.44
SUPT4H1-206ENST00000581204 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
SUPT4H1-206ENST00000581204 NRXN3Q9Y4C0 1643 aa12.27□□□□□ -0.44
SUPT4H1-206ENST00000581204 TULP1O00294 542 aaPredicted RBP12.27□□□□□ -0.45
SUPT4H1-206ENST00000581204 SOS2Q07890 1332 aaPredicted RBP12.27□□□□□ -0.45
SUPT4H1-206ENST00000581204 CLSPNQ9HAW4 1339 aa12.27□□□□□ -0.45
SUPT4H1-206ENST00000581204 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.45
SUPT4H1-206ENST00000581204 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
SUPT4H1-206ENST00000581204 ARHGEF1Q92888 912 aaKnown RBP12.26□□□□□ -0.45
SUPT4H1-206ENST00000581204 GJD4Q96KN9 370 aaPredicted RBP12.26□□□□□ -0.45
SUPT4H1-206ENST00000581204 AMOTL2Q9Y2J4 779 aa12.26□□□□□ -0.45
SUPT4H1-206ENST00000581204 PDE4AP27815 886 aa12.25□□□□□ -0.45
SUPT4H1-206ENST00000581204 E2F4Q16254 413 aa12.25□□□□□ -0.45
SUPT4H1-206ENST00000581204 ADGRL3Q9HAR2 1447 aa12.25□□□□□ -0.45
SUPT4H1-206ENST00000581204 C1orf167Q5SNV9 1468 aa12.25□□□□□ -0.45
SUPT4H1-206ENST00000581204 KANK1Q14678 1352 aa12.24□□□□□ -0.45
SUPT4H1-206ENST00000581204 RPRD2Q5VT52 1461 aaKnown RBP12.24□□□□□ -0.45
SUPT4H1-206ENST00000581204 MS4A4AQ96JQ5 239 aa12.23□□□□□ -0.45
SUPT4H1-206ENST00000581204 MPHOSPH9Q99550 1183 aa12.22□□□□□ -0.45
SUPT4H1-206ENST00000581204 SLIT2O94813 1529 aa12.21□□□□□ -0.45
SUPT4H1-206ENST00000581204 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
SUPT4H1-206ENST00000581204 NUP155O75694 1391 aa12.19□□□□□ -0.46
SUPT4H1-206ENST00000581204 HDGFP51858 240 aaKnown RBP12.19□□□□□ -0.46
SUPT4H1-206ENST00000581204 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
SUPT4H1-206ENST00000581204 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.19□□□□□ -0.46
SUPT4H1-206ENST00000581204 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
SUPT4H1-206ENST00000581204 PXDNQ92626 1479 aa12.18□□□□□ -0.46
SUPT4H1-206ENST00000581204 METP08581 1390 aa12.18□□□□□ -0.46
SUPT4H1-206ENST00000581204 NEUROD1Q13562 356 aa12.17□□□□□ -0.46
SUPT4H1-206ENST00000581204 MFSD10Q14728 455 aa12.17□□□□□ -0.46
SUPT4H1-206ENST00000581204 R3HDM1Q15032 1099 aaKnown RBP12.17□□□□□ -0.46
SUPT4H1-206ENST00000581204 ORAI2Q96SN7 254 aa12.17□□□□□ -0.46
SUPT4H1-206ENST00000581204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.46
SUPT4H1-206ENST00000581204 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
SUPT4H1-206ENST00000581204 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
SUPT4H1-206ENST00000581204 CRISPLD2Q9H0B8 497 aa12.16□□□□□ -0.46
SUPT4H1-206ENST00000581204 TNS1Q9HBL0 1735 aaKnown RBP12.15□□□□□ -0.46
SUPT4H1-206ENST00000581204 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
SUPT4H1-206ENST00000581204 UNC5CLQ8IV45 518 aa12.15□□□□□ -0.46
SUPT4H1-206ENST00000581204 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
SUPT4H1-206ENST00000581204 SIN3AQ96ST3 1273 aa12.15□□□□□ -0.46
SUPT4H1-206ENST00000581204 BMP2KQ9NSY1 1161 aaPredicted RBP12.15□□□□□ -0.46
SUPT4H1-206ENST00000581204 RGPD1P0DJD0 1748 aa12.14□□□□□ -0.47
SUPT4H1-206ENST00000581204 HAX1O00165 279 aa12.14□□□□□ -0.47
SUPT4H1-206ENST00000581204 BAG6P46379 1132 aa12.14□□□□□ -0.47
SUPT4H1-206ENST00000581204 IQGAP3Q86VI3 1631 aa12.13□□□□□ -0.47
SUPT4H1-206ENST00000581204 USP32Q8NFA0 1604 aa12.13□□□□□ -0.47
SUPT4H1-206ENST00000581204 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
SUPT4H1-206ENST00000581204 TRIM35Q9UPQ4 493 aa12.13□□□□□ -0.47
SUPT4H1-206ENST00000581204 CAMTA1Q9Y6Y1 1673 aa12.13□□□□□ -0.47
SUPT4H1-206ENST00000581204 SENP3-EIF4A1A0A087X0R7 540 aa12.12□□□□□ -0.47
SUPT4H1-206ENST00000581204 EN1Q05925 392 aaPredicted RBP12.12□□□□□ -0.47
SUPT4H1-206ENST00000581204 KRT27Q7Z3Y8 459 aa12.12□□□□□ -0.47
SUPT4H1-206ENST00000581204 E9PCH4 1651 aa12.12□□□□□ -0.47
SUPT4H1-206ENST00000581204 LMOD2Q6P5Q4 547 aa12.11□□□□□ -0.47
SUPT4H1-206ENST00000581204 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-206ENST00000581204 PLCH1Q4KWH8 1693 aa12.1□□□□□ -0.47
SUPT4H1-206ENST00000581204 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-206ENST00000581204 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.1□□□□□ -0.47
SUPT4H1-206ENST00000581204 ZNF784Q8NCA9 323 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-206ENST00000581204 UTRNP46939 3433 aa12.09□□□□□ -0.47
SUPT4H1-206ENST00000581204 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.47
SUPT4H1-206ENST00000581204 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms