RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 PLEKHG3A1L390 1219 aa15.24■□□□□ 0.03
SUPT4H1-204ENST00000580947 CCDC61Q9Y6R9 512 aa15.24■□□□□ 0.03
SUPT4H1-204ENST00000580947 RALGAPBQ86X10 1494 aa15.24■□□□□ 0.03
SUPT4H1-204ENST00000580947 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
SUPT4H1-204ENST00000580947 NGDNQ8NEJ9 315 aaKnown RBP15.23■□□□□ 0.03
SUPT4H1-204ENST00000580947 ACEP12821 1306 aa15.22■□□□□ 0.03
SUPT4H1-204ENST00000580947 UPF1Q92900 1129 aaKnown RBP eCLIP15.22■□□□□ 0.03
SUPT4H1-204ENST00000580947 PPIP5K1Q6PFW1 1433 aa15.22■□□□□ 0.03
SUPT4H1-204ENST00000580947 NRKQ7Z2Y5 1582 aa15.22■□□□□ 0.03
SUPT4H1-204ENST00000580947 LMOD2Q6P5Q4 547 aa15.21■□□□□ 0.03
SUPT4H1-204ENST00000580947 UNC5CLQ8IV45 518 aa15.21■□□□□ 0.03
SUPT4H1-204ENST00000580947 PIK3C2AO00443 1686 aa15.2■□□□□ 0.02
SUPT4H1-204ENST00000580947 FAM83GA6ND36 823 aa15.2■□□□□ 0.02
SUPT4H1-204ENST00000580947 GJD4Q96KN9 370 aaPredicted RBP15.2■□□□□ 0.02
SUPT4H1-204ENST00000580947 CABP2Q9NPB3 220 aa15.2■□□□□ 0.02
SUPT4H1-204ENST00000580947 MON2Q7Z3U7 1717 aa15.2■□□□□ 0.02
SUPT4H1-204ENST00000580947 SBNO2Q9Y2G9 1366 aa15.19■□□□□ 0.02
SUPT4H1-204ENST00000580947 LMO7Q8WWI1 1683 aa15.19■□□□□ 0.02
SUPT4H1-204ENST00000580947 SSH2Q76I76 1423 aa15.18■□□□□ 0.02
SUPT4H1-204ENST00000580947 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
SUPT4H1-204ENST00000580947 SRPK2P78362 688 aaKnown RBP15.18■□□□□ 0.02
SUPT4H1-204ENST00000580947 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
SUPT4H1-204ENST00000580947 HAP1P54257 671 aaPredicted RBP15.17■□□□□ 0.02
SUPT4H1-204ENST00000580947 USP6P35125 1406 aa15.17■□□□□ 0.02
SUPT4H1-204ENST00000580947 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
SUPT4H1-204ENST00000580947 VPS72Q15906 364 aa15.16■□□□□ 0.02
SUPT4H1-204ENST00000580947 USP19O94966 1318 aa15.16■□□□□ 0.02
SUPT4H1-204ENST00000580947 BRD4O60885 1362 aaPredicted RBP15.15■□□□□ 0.02
SUPT4H1-204ENST00000580947 USP54Q70EL1 1684 aa15.15■□□□□ 0.02
SUPT4H1-204ENST00000580947 THSD7AQ9UPZ6 1657 aa15.15■□□□□ 0.02
SUPT4H1-204ENST00000580947 EVC2Q86UK5 1308 aa15.15■□□□□ 0.02
SUPT4H1-204ENST00000580947 COL18A1P39060 1754 aa15.14■□□□□ 0.01
SUPT4H1-204ENST00000580947 SLIT3O75094 1523 aa15.14■□□□□ 0.01
SUPT4H1-204ENST00000580947 ONECUT3O60422 494 aaPredicted RBP15.14■□□□□ 0.01
SUPT4H1-204ENST00000580947 CABP1Q9NZU7 370 aa15.14■□□□□ 0.01
SUPT4H1-204ENST00000580947 ATAD2Q6PL18 1390 aa15.13■□□□□ 0.01
SUPT4H1-204ENST00000580947 KIAA0232Q92628 1395 aa15.13■□□□□ 0.01
SUPT4H1-204ENST00000580947 CPSF1Q10570 1443 aaKnown RBP15.12■□□□□ 0.01
SUPT4H1-204ENST00000580947 RGPD5Q99666 1765 aa15.12■□□□□ 0.01
SUPT4H1-204ENST00000580947 NUTM2GQ5VZR2 741 aa15.12■□□□□ 0.01
SUPT4H1-204ENST00000580947 CARD11Q9BXL7 1154 aa15.12■□□□□ 0.01
SUPT4H1-204ENST00000580947 BTG4Q9NY30 223 aa15.12■□□□□ 0.01
SUPT4H1-204ENST00000580947 CD163L1Q9NR16 1453 aa15.12■□□□□ 0.01
SUPT4H1-204ENST00000580947 CAMTA1Q9Y6Y1 1673 aa15.12■□□□□ 0.01
SUPT4H1-204ENST00000580947 CPDO75976 1380 aa15.11■□□□□ 0.01
SUPT4H1-204ENST00000580947 ABTB2Q8N961 1025 aa15.1■□□□□ 0.01
SUPT4H1-204ENST00000580947 PRDM11Q9NQV5 511 aa15.09■□□□□ 0.01
SUPT4H1-204ENST00000580947 SPATA31A5Q5VU36 1347 aa15.09■□□□□ 0.01
SUPT4H1-204ENST00000580947 SPATA31A7Q8IWB4 1347 aa15.09■□□□□ 0.01
SUPT4H1-204ENST00000580947 CHRNA2Q15822 529 aa15.08■□□□□ 0
SUPT4H1-204ENST00000580947 SEPT12Q8IYM1 358 aa15.08■□□□□ 0
SUPT4H1-204ENST00000580947 WNK3Q9BYP7 1800 aa15.08■□□□□ 0
SUPT4H1-204ENST00000580947 ZC3H6P61129 1189 aaKnown RBP15.07■□□□□ 0
SUPT4H1-204ENST00000580947 TESK2Q96S53 571 aa15.07■□□□□ 0
SUPT4H1-204ENST00000580947 SRCAPQ6ZRS2 3230 aa15.07■□□□□ 0
SUPT4H1-204ENST00000580947 NFAT5O94916 1531 aa15.07■□□□□ 0
SUPT4H1-204ENST00000580947 NLRP13Q86W25 1043 aa15.06■□□□□ 0
SUPT4H1-204ENST00000580947 LTN1O94822 1766 aa15.06■□□□□ 0
SUPT4H1-204ENST00000580947 GCP02774 474 aa15.05■□□□□ -0
SUPT4H1-204ENST00000580947 TTC21BQ7Z4L5 1316 aa15.05■□□□□ -0
SUPT4H1-204ENST00000580947 TNS1Q9HBL0 1735 aaKnown RBP15.05■□□□□ -0
SUPT4H1-204ENST00000580947 PARP4Q9UKK3 1724 aaKnown RBP15.05■□□□□ -0
SUPT4H1-204ENST00000580947 COL5A2P05997 1499 aaPredicted RBP15.04■□□□□ -0
SUPT4H1-204ENST00000580947 SPATA31A1Q5TZJ5 1347 aa15.04■□□□□ -0
SUPT4H1-204ENST00000580947 ZNF692Q9BU19 519 aaPredicted RBP15.04■□□□□ -0
SUPT4H1-204ENST00000580947 CCDC9Q9Y3X0 531 aaKnown RBP15.04■□□□□ -0
SUPT4H1-204ENST00000580947 RGPD1P0DJD0 1748 aa15.03■□□□□ -0
SUPT4H1-204ENST00000580947 KTN1Q86UP2 1357 aaKnown RBP15.03■□□□□ -0
SUPT4H1-204ENST00000580947 CLSPNQ9HAW4 1339 aa15.03■□□□□ -0
SUPT4H1-204ENST00000580947 FAM98CQ17RN3 349 aaKnown RBP15.03■□□□□ -0
SUPT4H1-204ENST00000580947 PUS7Q96PZ0 661 aaKnown RBP15.03■□□□□ -0
SUPT4H1-204ENST00000580947 TTC21AQ8NDW8 1320 aa15.02■□□□□ -0
SUPT4H1-204ENST00000580947 ST20-MTHFSA0A0A6YYL1 179 aa15.02■□□□□ -0
SUPT4H1-204ENST00000580947 NLRP6P59044 892 aa15.02■□□□□ -0
SUPT4H1-204ENST00000580947 BLMP54132 1417 aaPredicted RBP15.01□□□□□ -0.01
SUPT4H1-204ENST00000580947 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
SUPT4H1-204ENST00000580947 MYOM1P52179 1685 aa15.01□□□□□ -0.01
SUPT4H1-204ENST00000580947 KRT27Q7Z3Y8 459 aa15.01□□□□□ -0.01
SUPT4H1-204ENST00000580947 CCDC125Q86Z20 511 aa15.01□□□□□ -0.01
SUPT4H1-204ENST00000580947 ABCC6O95255 1503 aa15.01□□□□□ -0.01
SUPT4H1-204ENST00000580947 USP31Q70CQ4 1352 aa15□□□□□ -0.01
SUPT4H1-204ENST00000580947 SLC12A5Q9H2X9 1139 aa15□□□□□ -0.01
SUPT4H1-204ENST00000580947 STRN4Q9NRL3 753 aa15□□□□□ -0.01
SUPT4H1-204ENST00000580947 A0A1W2PP64 1363 aa14.99□□□□□ -0.01
SUPT4H1-204ENST00000580947 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
SUPT4H1-204ENST00000580947 USP47Q96K76 1375 aa14.99□□□□□ -0.01
SUPT4H1-204ENST00000580947 SBF2Q86WG5 1849 aa14.99□□□□□ -0.01
SUPT4H1-204ENST00000580947 LARP1Q6PKG0 1096 aaKnown RBP14.99□□□□□ -0.01
SUPT4H1-204ENST00000580947 TIMELESSQ9UNS1 1208 aa14.99□□□□□ -0.01
SUPT4H1-204ENST00000580947 PEAK1Q9H792 1746 aa14.99□□□□□ -0.01
SUPT4H1-204ENST00000580947 EDC4Q6P2E9 1401 aaKnown RBP14.99□□□□□ -0.01
SUPT4H1-204ENST00000580947 PCGF6Q9BYE7 350 aa14.98□□□□□ -0.01
SUPT4H1-204ENST00000580947 BARGINQ6ZT62 677 aa14.97□□□□□ -0.01
SUPT4H1-204ENST00000580947 ARHGEF25Q86VW2 580 aa14.97□□□□□ -0.01
SUPT4H1-204ENST00000580947 ZRANB1Q9UGI0 708 aa14.97□□□□□ -0.01
SUPT4H1-204ENST00000580947 OVOS2A0A0J9YW53 1432 aa14.97□□□□□ -0.01
SUPT4H1-204ENST00000580947 OVOS2Q6IE36 1432 aa14.97□□□□□ -0.01
SUPT4H1-204ENST00000580947 NINLQ9Y2I6 1382 aa14.97□□□□□ -0.01
SUPT4H1-204ENST00000580947 CRB1P82279 1406 aa14.96□□□□□ -0.01
SUPT4H1-204ENST00000580947 AXIN2Q9Y2T1 843 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms