RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 RCAN3Q9UKA8 241 aa8.34□□□□□ -1.07
PPP4R1-217ENST00000580583 TBX22Q9Y458 520 aa8.34□□□□□ -1.07
PPP4R1-217ENST00000580583 FMN2Q9NZ56 1722 aa8.34□□□□□ -1.07
PPP4R1-217ENST00000580583 LRRC7Q96NW7 1537 aa8.34□□□□□ -1.08
PPP4R1-217ENST00000580583 FYB1O15117 783 aa8.33□□□□□ -1.08
PPP4R1-217ENST00000580583 ANKARQ7Z5J8 1434 aa8.33□□□□□ -1.08
PPP4R1-217ENST00000580583 CCDC146Q8IYE0 955 aa8.33□□□□□ -1.08
PPP4R1-217ENST00000580583 NALCNQ8IZF0 1738 aa8.33□□□□□ -1.08
PPP4R1-217ENST00000580583 NUDT16Q96DE0 195 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-217ENST00000580583 CDCA7LQ96GN5 454 aa8.33□□□□□ -1.08
PPP4R1-217ENST00000580583 SLC26A8Q96RN1 970 aa8.33□□□□□ -1.08
PPP4R1-217ENST00000580583 PRR36Q9H6K5 1346 aa8.32□□□□□ -1.08
PPP4R1-217ENST00000580583 GOLGA2Q08379 1002 aa8.32□□□□□ -1.08
PPP4R1-217ENST00000580583 RUNDC1Q96C34 613 aa8.32□□□□□ -1.08
PPP4R1-217ENST00000580583 CCDC61Q9Y6R9 512 aa8.32□□□□□ -1.08
PPP4R1-217ENST00000580583 NWD1Q149M9 1564 aa8.31□□□□□ -1.08
PPP4R1-217ENST00000580583 USP6P35125 1406 aa8.31□□□□□ -1.08
PPP4R1-217ENST00000580583 APAF1O14727 1248 aa8.31□□□□□ -1.08
PPP4R1-217ENST00000580583 AATKQ6ZMQ8 1374 aa8.31□□□□□ -1.08
PPP4R1-217ENST00000580583 PNPLA6Q8IY17 1366 aa8.31□□□□□ -1.08
PPP4R1-217ENST00000580583 OVOS2A0A0J9YW53 1432 aa8.3□□□□□ -1.08
PPP4R1-217ENST00000580583 OVOS2Q6IE36 1432 aa8.3□□□□□ -1.08
PPP4R1-217ENST00000580583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.3□□□□□ -1.081e-6■■■■□ 26.6
PPP4R1-217ENST00000580583 AMOTL2Q9Y2J4 779 aa8.3□□□□□ -1.08
PPP4R1-217ENST00000580583 NPHP4O75161 1426 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-217ENST00000580583 CHD2O14647 1828 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-217ENST00000580583 E9PSI1 815 aa8.29□□□□□ -1.08
PPP4R1-217ENST00000580583 U2AF1L5P0DN76 240 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-217ENST00000580583 U2AF1Q01081 240 aaKnown RBP eCLIP8.29□□□□□ -1.08
PPP4R1-217ENST00000580583 SLFN5Q08AF3 891 aa8.29□□□□□ -1.08
PPP4R1-217ENST00000580583 DUSP27Q5VZP5 1158 aa8.29□□□□□ -1.08
PPP4R1-217ENST00000580583 USP54Q70EL1 1684 aa8.29□□□□□ -1.08
PPP4R1-217ENST00000580583 PLEKHG3A1L390 1219 aa8.28□□□□□ -1.08
PPP4R1-217ENST00000580583 NCBP3Q53F19 620 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-217ENST00000580583 NME9Q86XW9 330 aa8.28□□□□□ -1.08
PPP4R1-217ENST00000580583 SSH2Q76I76 1423 aa8.28□□□□□ -1.08
PPP4R1-217ENST00000580583 ADGRL3Q9HAR2 1447 aa8.28□□□□□ -1.08
PPP4R1-217ENST00000580583 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
PPP4R1-217ENST00000580583 MAPK8IP3Q9UPT6 1336 aa8.28□□□□□ -1.08
PPP4R1-217ENST00000580583 PIK3C2AO00443 1686 aa8.27□□□□□ -1.08
PPP4R1-217ENST00000580583 U2SURPO15042 1029 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 DIAPH1O60610 1272 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 KCNA6P17658 529 aa8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 CCDC27Q2M243 656 aa8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 ANKLE2Q86XL3 938 aa8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 TRMT2AQ8IZ69 625 aaKnown RBP8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 TCP11L2Q8N4U5 519 aa8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 COG3Q96JB2 828 aa8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 ZNF692Q9BU19 519 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 ACEP12821 1306 aa8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 TTC21AQ8NDW8 1320 aa8.27□□□□□ -1.09
PPP4R1-217ENST00000580583 B4GALNT3Q6L9W6 998 aa8.26□□□□□ -1.09
PPP4R1-217ENST00000580583 PPP4R3CPQ6ZMV5 832 aa8.26□□□□□ -1.09
PPP4R1-217ENST00000580583 WWC1Q8IX03 1113 aa8.26□□□□□ -1.09
PPP4R1-217ENST00000580583 TTC21BQ7Z4L5 1316 aa8.26□□□□□ -1.09
PPP4R1-217ENST00000580583 SETD1BQ9UPS6 1966 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 WDR63Q8IWG1 891 aa8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 PNNQ9H307 717 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 TSHZ2Q9NRE2 1034 aa8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 POLKQ9UBT6 870 aa8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 RRP7AQ9Y3A4 280 aaKnown RBP8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 RGPD1P0DJD0 1748 aa8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 PEAK1Q9H792 1746 aa8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 RGPD8O14715 1765 aaPredicted RBP8.25□□□□□ -1.09
PPP4R1-217ENST00000580583 MAP2P11137 1827 aaKnown RBP8.24□□□□□ -1.09
PPP4R1-217ENST00000580583 USP31Q70CQ4 1352 aa8.24□□□□□ -1.09
PPP4R1-217ENST00000580583 MARF1Q9Y4F3 1742 aaKnown RBP8.24□□□□□ -1.09
PPP4R1-217ENST00000580583 CCDC136Q96JN2 1154 aa8.24□□□□□ -1.09
PPP4R1-217ENST00000580583 MYH16Q9H6N6 1097 aa8.24□□□□□ -1.09
PPP4R1-217ENST00000580583 SPINK5Q9NQ38 1064 aaPredicted RBP8.24□□□□□ -1.09
PPP4R1-217ENST00000580583 EMILIN1Q9Y6C2 1016 aa8.24□□□□□ -1.09
PPP4R1-217ENST00000580583 NUTM2FA1L443 756 aa8.23□□□□□ -1.09
PPP4R1-217ENST00000580583 NEUROD2Q15784 382 aa8.23□□□□□ -1.09
PPP4R1-217ENST00000580583 EXOC6Q8TAG9 804 aa8.23□□□□□ -1.09
PPP4R1-217ENST00000580583 PLEKHF1Q96S99 279 aa8.23□□□□□ -1.09
PPP4R1-217ENST00000580583 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
PPP4R1-217ENST00000580583 KIF1AQ12756 1690 aa8.22□□□□□ -1.09
PPP4R1-217ENST00000580583 PPM1GO15355 546 aaPredicted RBP8.22□□□□□ -1.09
PPP4R1-217ENST00000580583 NEFMP07197 916 aa8.22□□□□□ -1.09
PPP4R1-217ENST00000580583 TMPOP42166 694 aaKnown RBP8.22□□□□□ -1.09
PPP4R1-217ENST00000580583 RSPH6AQ9H0K4 717 aa8.22□□□□□ -1.09
PPP4R1-217ENST00000580583 IL16Q14005 1332 aa8.22□□□□□ -1.09
PPP4R1-217ENST00000580583 PLIN1O60240 522 aa8.21□□□□□ -1.1
PPP4R1-217ENST00000580583 FCHSD2O94868 740 aa8.21□□□□□ -1.1
PPP4R1-217ENST00000580583 PRKAR2BP31323 418 aa8.21□□□□□ -1.1
PPP4R1-217ENST00000580583 IL13P35225 146 aa8.21□□□□□ -1.1
PPP4R1-217ENST00000580583 NGDNQ8NEJ9 315 aaKnown RBP8.21□□□□□ -1.1
PPP4R1-217ENST00000580583 CRBNQ96SW2 442 aa8.21□□□□□ -1.1
PPP4R1-217ENST00000580583 FANCIQ9NVI1 1328 aa8.21□□□□□ -1.1
PPP4R1-217ENST00000580583 SBNO1A3KN83 1393 aa8.21□□□□□ -1.1
PPP4R1-217ENST00000580583 RRS1Q15050 365 aaKnown RBP8.2□□□□□ -1.1
PPP4R1-217ENST00000580583 PMFBP1Q8TBY8 1022 aa8.2□□□□□ -1.1
PPP4R1-217ENST00000580583 ARHGEF10O15013 1369 aa8.2□□□□□ -1.1
PPP4R1-217ENST00000580583 FLT4P35916 1363 aa8.2□□□□□ -1.1
PPP4R1-217ENST00000580583 CT47B1P0C2W7 299 aaPredicted RBP8.19□□□□□ -1.1
PPP4R1-217ENST00000580583 FBLN1P23142 703 aa8.19□□□□□ -1.1
PPP4R1-217ENST00000580583 NFE2L2Q16236 605 aa8.19□□□□□ -1.1
PPP4R1-217ENST00000580583 TRIM35Q9UPQ4 493 aa8.19□□□□□ -1.1
PPP4R1-217ENST00000580583 RTL1A6NKG5 1358 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms