RNA–Protein interactions for RNA: ENST00000579180.2

MSI2-206, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MSI2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-206ENST00000579180 TNNT2P45379 298 aaPredicted RBP21.18■□□□□ 0.98
MSI2-206ENST00000579180 NME9Q86XW9 330 aa21.18■□□□□ 0.98
MSI2-206ENST00000579180 NGDNQ8NEJ9 315 aaKnown RBP21.18■□□□□ 0.98
MSI2-206ENST00000579180 PHF8Q9UPP1 1060 aa21.18■□□□□ 0.98
MSI2-206ENST00000579180 C1orf167Q5SNV9 1468 aa21.15■□□□□ 0.98
MSI2-206ENST00000579180 MAP2P11137 1827 aaKnown RBP21.15■□□□□ 0.98
MSI2-206ENST00000579180 ZRANB1Q9UGI0 708 aa21.15■□□□□ 0.98
MSI2-206ENST00000579180 MST1RQ04912 1400 aa21.15■□□□□ 0.98
MSI2-206ENST00000579180 KIF1AQ12756 1690 aa21.14■□□□□ 0.98
MSI2-206ENST00000579180 TTC21AQ8NDW8 1320 aa21.14■□□□□ 0.97
MSI2-206ENST00000579180 SCAF1Q9H7N4 1312 aaKnown RBP21.14■□□□□ 0.97
MSI2-206ENST00000579180 ESCO1Q5FWF5 840 aa21.14■□□□□ 0.97
MSI2-206ENST00000579180 PIK3C2AO00443 1686 aa21.14■□□□□ 0.97
MSI2-206ENST00000579180 SHPRHQ149N8 1683 aa21.14■□□□□ 0.97
MSI2-206ENST00000579180 ATF3P18847 181 aa21.13■□□□□ 0.97
MSI2-206ENST00000579180 MTHFSP49914 203 aa21.13■□□□□ 0.97
MSI2-206ENST00000579180 HNRNPUQ00839 825 aaKnown RBP eCLIP21.13■□□□□ 0.972e-6■■■□□ 16.5
MSI2-206ENST00000579180 INSRP06213 1382 aa21.13■□□□□ 0.97
MSI2-206ENST00000579180 USP54Q70EL1 1684 aa21.12■□□□□ 0.97
MSI2-206ENST00000579180 OVOS2A0A0J9YW53 1432 aa21.12■□□□□ 0.97
MSI2-206ENST00000579180 OVOS2Q6IE36 1432 aa21.12■□□□□ 0.97
MSI2-206ENST00000579180 ORAI2Q96SN7 254 aa21.12■□□□□ 0.97
MSI2-206ENST00000579180 MSH6P52701 1360 aa21.12■□□□□ 0.97
MSI2-206ENST00000579180 COG3Q96JB2 828 aa21.11■□□□□ 0.97
MSI2-206ENST00000579180 MARF1Q9Y4F3 1742 aaKnown RBP21.11■□□□□ 0.97
MSI2-206ENST00000579180 CADPS2Q86UW7 1296 aa21.1■□□□□ 0.97
MSI2-206ENST00000579180 AATKQ6ZMQ8 1374 aa21.09■□□□□ 0.97
MSI2-206ENST00000579180 USP31Q70CQ4 1352 aa21.09■□□□□ 0.97
MSI2-206ENST00000579180 BLMP54132 1417 aaPredicted RBP21.08■□□□□ 0.97
MSI2-206ENST00000579180 ADAMTS8Q9UP79 889 aa21.07■□□□□ 0.96
MSI2-206ENST00000579180 COL3A1P02461 1466 aaPredicted RBP21.07■□□□□ 0.96
MSI2-206ENST00000579180 SMG6Q86US8 1419 aaKnown RBP21.07■□□□□ 0.96
MSI2-206ENST00000579180 TRPM3Q9HCF6 1732 aaPredicted RBP21.06■□□□□ 0.96
MSI2-206ENST00000579180 WDR43Q15061 677 aaKnown RBP eCLIP21.06■□□□□ 0.96
MSI2-206ENST00000579180 CFAP53Q96M91 514 aa21.06■□□□□ 0.96
MSI2-206ENST00000579180 POLKQ9UBT6 870 aa21.06■□□□□ 0.96
MSI2-206ENST00000579180 PNPLA6Q8IY17 1366 aa21.06■□□□□ 0.96
MSI2-206ENST00000579180 FBLN1P23142 703 aa21.05■□□□□ 0.96
MSI2-206ENST00000579180 PSME1Q06323 249 aa21.04■□□□□ 0.96
MSI2-206ENST00000579180 FOXO3O43524 673 aa21.04■□□□□ 0.96
MSI2-206ENST00000579180 ZBED9Q6R2W3 1325 aa21.03■□□□□ 0.96
MSI2-206ENST00000579180 LTBP4Q8N2S1 1624 aa21.02■□□□□ 0.96
MSI2-206ENST00000579180 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
MSI2-206ENST00000579180 PAK3O75914 559 aaPredicted RBP21■□□□□ 0.95
MSI2-206ENST00000579180 ABTB2Q8N961 1025 aa21■□□□□ 0.95
MSI2-206ENST00000579180 EMILIN1Q9Y6C2 1016 aa21■□□□□ 0.95
MSI2-206ENST00000579180 NLRP6P59044 892 aa20.99■□□□□ 0.95
MSI2-206ENST00000579180 ALS2Q96Q42 1657 aa20.99■□□□□ 0.95
MSI2-206ENST00000579180 PEAK1Q9H792 1746 aa20.98■□□□□ 0.95
MSI2-206ENST00000579180 KRT28Q7Z3Y7 464 aa20.98■□□□□ 0.95
MSI2-206ENST00000579180 RRS1Q15050 365 aaKnown RBP20.97■□□□□ 0.95
MSI2-206ENST00000579180 XPCQ01831 940 aaPredicted RBP20.96■□□□□ 0.95
MSI2-206ENST00000579180 NUTM2GQ5VZR2 741 aa20.96■□□□□ 0.95
MSI2-206ENST00000579180 SLAIN2Q9P270 581 aa20.96■□□□□ 0.95
MSI2-206ENST00000579180 PPM1GO15355 546 aaPredicted RBP20.95■□□□□ 0.94
MSI2-206ENST00000579180 DIAPH1O60610 1272 aaKnown RBP20.95■□□□□ 0.94
MSI2-206ENST00000579180 BRINP3Q76B58 766 aa20.94■□□□□ 0.94
MSI2-206ENST00000579180 PXDNQ92626 1479 aa20.94■□□□□ 0.94
MSI2-206ENST00000579180 NPHP3Q7Z494 1330 aa20.94■□□□□ 0.94
MSI2-206ENST00000579180 SENP3-EIF4A1A0A087X0R7 540 aa20.93■□□□□ 0.94
MSI2-206ENST00000579180 NUDCQ9Y266 331 aa20.93■□□□□ 0.94
MSI2-206ENST00000579180 LTN1O94822 1766 aa20.93■□□□□ 0.94
MSI2-206ENST00000579180 SLIT3O75094 1523 aa20.92■□□□□ 0.94
MSI2-206ENST00000579180 NFAT5O94916 1531 aa20.92■□□□□ 0.94
MSI2-206ENST00000579180 DDX17Q92841 729 aaKnown RBP20.92■□□□□ 0.94
MSI2-206ENST00000579180 SBNO1A3KN83 1393 aa20.92■□□□□ 0.94
MSI2-206ENST00000579180 MAP3K19Q56UN5 1328 aa20.91■□□□□ 0.94
MSI2-206ENST00000579180 CCDC146Q8IYE0 955 aa20.91■□□□□ 0.94
MSI2-206ENST00000579180 SOX12O15370 315 aa20.9■□□□□ 0.94
MSI2-206ENST00000579180 U2AF1L5P0DN76 240 aaPredicted RBP20.9■□□□□ 0.94
MSI2-206ENST00000579180 IL13P35225 146 aa20.9■□□□□ 0.94
MSI2-206ENST00000579180 U2AF1Q01081 240 aaKnown RBP eCLIP20.9■□□□□ 0.94
MSI2-206ENST00000579180 NHSL1Q5SYE7 1610 aa20.89■□□□□ 0.94
MSI2-206ENST00000579180 U2SURPO15042 1029 aaKnown RBP20.89■□□□□ 0.93
MSI2-206ENST00000579180 PHRF1Q9P1Y6 1649 aaKnown RBP20.88■□□□□ 0.93
MSI2-206ENST00000579180 KIF24Q5T7B8 1368 aa20.88■□□□□ 0.93
MSI2-206ENST00000579180 USP19O94966 1318 aa20.88■□□□□ 0.93
MSI2-206ENST00000579180 RUNDC1Q96C34 613 aa20.87■□□□□ 0.93
MSI2-206ENST00000579180 IQSEC2Q5JU85 1478 aa20.87■□□□□ 0.93
MSI2-206ENST00000579180 FLT4P35916 1363 aa20.87■□□□□ 0.93
MSI2-206ENST00000579180 RGPD1P0DJD0 1748 aa20.87■□□□□ 0.93
MSI2-206ENST00000579180 MED1Q15648 1581 aaPredicted RBP20.87■□□□□ 0.93
MSI2-206ENST00000579180 TNS3Q68CZ2 1445 aa20.86■□□□□ 0.93
MSI2-206ENST00000579180 KCNH5Q8NCM2 988 aa20.86■□□□□ 0.93
MSI2-206ENST00000579180 CRYBG1Q9Y4K1 1723 aa20.86■□□□□ 0.93
MSI2-206ENST00000579180 APAF1O14727 1248 aa20.86■□□□□ 0.93
MSI2-206ENST00000579180 HSP90AB2PQ58FF8 381 aa20.86■□□□□ 0.93
MSI2-206ENST00000579180 SALL2Q9Y467 1007 aaPredicted RBP20.86■□□□□ 0.93
MSI2-206ENST00000579180 SOS2Q07890 1332 aaPredicted RBP20.85■□□□□ 0.93
MSI2-206ENST00000579180 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
MSI2-206ENST00000579180 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
MSI2-206ENST00000579180 SPATA31A3Q5VYP0 1347 aa20.85■□□□□ 0.93
MSI2-206ENST00000579180 EIF4A2Q14240 407 aaKnown RBP20.84■□□□□ 0.93
MSI2-206ENST00000579180 PLEKHF1Q96S99 279 aa20.84■□□□□ 0.93
MSI2-206ENST00000579180 RTL1A6NKG5 1358 aa20.83■□□□□ 0.93
MSI2-206ENST00000579180 FCHSD2O94868 740 aa20.82■□□□□ 0.92
MSI2-206ENST00000579180 GCP02774 474 aa20.82■□□□□ 0.92
MSI2-206ENST00000579180 AMPHP49418 695 aa20.82■□□□□ 0.92
MSI2-206ENST00000579180 ROBO1Q9Y6N7 1651 aa20.82■□□□□ 0.92
MSI2-206ENST00000579180 HOXC9P31274 260 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms