RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 TXLNBQ8N3L3 684 aa12.82□□□□□ -0.36
SEC22B-201ENST00000578049 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
SEC22B-201ENST00000578049 PRXQ9BXM0 1461 aa12.82□□□□□ -0.36
SEC22B-201ENST00000578049 CCDC191Q8NCU4 936 aa12.82□□□□□ -0.36
SEC22B-201ENST00000578049 GNAI2P04899 355 aa12.81□□□□□ -0.36
SEC22B-201ENST00000578049 APPP05067 770 aa12.81□□□□□ -0.36
SEC22B-201ENST00000578049 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
SEC22B-201ENST00000578049 DACH1Q9UI36 760 aa12.81□□□□□ -0.36
SEC22B-201ENST00000578049 EIF3JO75822 258 aaKnown RBP12.81□□□□□ -0.36
SEC22B-201ENST00000578049 NUTM2DQ5VT03 806 aaPredicted RBP12.81□□□□□ -0.36
SEC22B-201ENST00000578049 RPAP2Q8IXW5 612 aaPredicted RBP12.81□□□□□ -0.36
SEC22B-201ENST00000578049 H0YHG0 523 aa12.8□□□□□ -0.36
SEC22B-201ENST00000578049 MCM5P33992 734 aa12.8□□□□□ -0.36
SEC22B-201ENST00000578049 SART3Q15020 963 aaKnown RBP12.8□□□□□ -0.36
SEC22B-201ENST00000578049 TWISTNBQ3B726 338 aaPredicted RBP12.8□□□□□ -0.36
SEC22B-201ENST00000578049 CYP46A1Q9Y6A2 500 aa12.8□□□□□ -0.36
SEC22B-201ENST00000578049 RRP12Q5JTH9 1297 aaKnown RBP12.8□□□□□ -0.36
SEC22B-201ENST00000578049 CBFA2T2O43439 604 aa12.8□□□□□ -0.36
SEC22B-201ENST00000578049 USP8P40818 1118 aa12.8□□□□□ -0.36
SEC22B-201ENST00000578049 FSD1Q9BTV5 496 aa12.8□□□□□ -0.36
SEC22B-201ENST00000578049 RDXP35241 583 aaKnown RBP12.79□□□□□ -0.36
SEC22B-201ENST00000578049 SURF6O75683 361 aaKnown RBP12.79□□□□□ -0.36
SEC22B-201ENST00000578049 CHD1LQ86WJ1 897 aa12.79□□□□□ -0.36
SEC22B-201ENST00000578049 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
SEC22B-201ENST00000578049 LUC7LQ9NQ29 371 aaKnown RBP12.79□□□□□ -0.36
SEC22B-201ENST00000578049 FIBPO43427 364 aa12.78□□□□□ -0.36
SEC22B-201ENST00000578049 PPP6R1Q9UPN7 881 aa12.78□□□□□ -0.36
SEC22B-201ENST00000578049 G3V3G9 751 aa12.78□□□□□ -0.36
SEC22B-201ENST00000578049 DCAF8Q5TAQ9 597 aa12.78□□□□□ -0.36
SEC22B-201ENST00000578049 TSPYL1Q9H0U9 437 aa12.78□□□□□ -0.36
SEC22B-201ENST00000578049 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
SEC22B-201ENST00000578049 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
SEC22B-201ENST00000578049 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
SEC22B-201ENST00000578049 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
SEC22B-201ENST00000578049 STK38Q15208 465 aa12.77□□□□□ -0.36
SEC22B-201ENST00000578049 VPS53Q5VIR6 699 aa12.77□□□□□ -0.36
SEC22B-201ENST00000578049 TNMDQ9H2S6 317 aa12.77□□□□□ -0.36
SEC22B-201ENST00000578049 CFAP45Q9UL16 551 aa12.77□□□□□ -0.36
SEC22B-201ENST00000578049 UQCRHLA0A096LP55 91 aa12.77□□□□□ -0.37
SEC22B-201ENST00000578049 OFD1O75665 1012 aa12.77□□□□□ -0.37
SEC22B-201ENST00000578049 UQCRHP07919 91 aa12.77□□□□□ -0.37
SEC22B-201ENST00000578049 CEP57L1Q8IYX8 460 aa12.77□□□□□ -0.37
SEC22B-201ENST00000578049 SMC2O95347 1197 aa12.77□□□□□ -0.37
SEC22B-201ENST00000578049 CAGE1Q8TC20 777 aa12.77□□□□□ -0.37
SEC22B-201ENST00000578049 ZNF644Q9H582 1327 aaPredicted RBP12.77□□□□□ -0.37
SEC22B-201ENST00000578049 SLFN5Q08AF3 891 aa12.77□□□□□ -0.37
SEC22B-201ENST00000578049 KRT32Q14532 448 aa12.76□□□□□ -0.37
SEC22B-201ENST00000578049 ERBINQ96RT1 1412 aa12.76□□□□□ -0.37
SEC22B-201ENST00000578049 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
SEC22B-201ENST00000578049 TXLNAP40222 546 aa12.76□□□□□ -0.37
SEC22B-201ENST00000578049 LRRCC1Q9C099 1032 aa12.76□□□□□ -0.37
SEC22B-201ENST00000578049 PDILTQ8N807 584 aa12.76□□□□□ -0.37
SEC22B-201ENST00000578049 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
SEC22B-201ENST00000578049 NBPF8Q3BBV2 869 aa12.76□□□□□ -0.37
SEC22B-201ENST00000578049 PRKAR2BP31323 418 aa12.76□□□□□ -0.37
SEC22B-201ENST00000578049 ZNHIT6Q9NWK9 470 aaKnown RBP12.75□□□□□ -0.37
SEC22B-201ENST00000578049 BCAR3O75815 825 aa12.75□□□□□ -0.37
SEC22B-201ENST00000578049 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
SEC22B-201ENST00000578049 NOB1Q9ULX3 412 aaKnown RBP12.75□□□□□ -0.37
SEC22B-201ENST00000578049 CFTRP13569 1480 aa12.75□□□□□ -0.37
SEC22B-201ENST00000578049 IQCEQ6IPM2 695 aa12.75□□□□□ -0.37
SEC22B-201ENST00000578049 GBP3Q9H0R5 595 aa12.74□□□□□ -0.37
SEC22B-201ENST00000578049 PDCL3Q9H2J4 239 aa12.74□□□□□ -0.37
SEC22B-201ENST00000578049 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
SEC22B-201ENST00000578049 HMOX1P09601 288 aa12.74□□□□□ -0.37
SEC22B-201ENST00000578049 TBC1D2BQ9UPU7 963 aa12.74□□□□□ -0.37
SEC22B-201ENST00000578049 NAP1L1P55209 391 aaKnown RBP12.74□□□□□ -0.37
SEC22B-201ENST00000578049 ANKRD30BQ9BXX2 1392 aa12.74□□□□□ -0.37
SEC22B-201ENST00000578049 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
SEC22B-201ENST00000578049 NUP62CLQ9H1M0 184 aa12.74□□□□□ -0.37
SEC22B-201ENST00000578049 WASHC4Q2M389 1173 aa12.74□□□□□ -0.37
SEC22B-201ENST00000578049 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
SEC22B-201ENST00000578049 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
SEC22B-201ENST00000578049 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
SEC22B-201ENST00000578049 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
SEC22B-201ENST00000578049 C9orf84Q5VXU9 1444 aa12.73□□□□□ -0.37
SEC22B-201ENST00000578049 NEMFO60524 1076 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 FCHSD2O94868 740 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 MAGEC2Q9UBF1 373 aaPredicted RBP12.72□□□□□ -0.37
SEC22B-201ENST00000578049 ATAD2Q6PL18 1390 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 NUTM2FA1L443 756 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 LARP1BQ659C4 914 aaKnown RBP12.72□□□□□ -0.37
SEC22B-201ENST00000578049 PPFIBP1Q86W92 1011 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 TROQ12816 1431 aaPredicted RBP12.72□□□□□ -0.37
SEC22B-201ENST00000578049 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 GOLGA6L7A0A1B0GV03 622 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 ERLIN2O94905 339 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 NEUROD6Q96NK8 337 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 TCEAL9Q9UHQ7 104 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
SEC22B-201ENST00000578049 KIAA0754O94854 1291 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
SEC22B-201ENST00000578049 CDKL5O76039 1030 aa12.71□□□□□ -0.37
SEC22B-201ENST00000578049 CAVIN2O95810 425 aa12.71□□□□□ -0.37
SEC22B-201ENST00000578049 SERPINC1P01008 464 aa12.71□□□□□ -0.37
SEC22B-201ENST00000578049 RBM10P98175 930 aaKnown RBP12.71□□□□□ -0.37
SEC22B-201ENST00000578049 CFAP70Q5T0N1 1121 aa12.71□□□□□ -0.37
SEC22B-201ENST00000578049 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms