RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 TNS3Q68CZ2 1445 aa17.17■□□□□ 0.34
RARA-208ENST00000577646 LRP6O75581 1613 aa17.17■□□□□ 0.34
RARA-208ENST00000577646 PNPLA6Q8IY17 1366 aa17.16■□□□□ 0.34
RARA-208ENST00000577646 USP6P35125 1406 aa17.16■□□□□ 0.34
RARA-208ENST00000577646 SLC12A5Q9H2X9 1139 aa17.16■□□□□ 0.34
RARA-208ENST00000577646 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
RARA-208ENST00000577646 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
RARA-208ENST00000577646 ANKRD36BQ8N2N9 1353 aa17.15■□□□□ 0.34
RARA-208ENST00000577646 XPCQ01831 940 aaPredicted RBP17.14■□□□□ 0.33
RARA-208ENST00000577646 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
RARA-208ENST00000577646 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
RARA-208ENST00000577646 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
RARA-208ENST00000577646 COL22A1Q8NFW1 1626 aaPredicted RBP17.13■□□□□ 0.33
RARA-208ENST00000577646 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
RARA-208ENST00000577646 C8orf37Q96NL8 207 aa17.12■□□□□ 0.33
RARA-208ENST00000577646 EDC4Q6P2E9 1401 aaKnown RBP17.12■□□□□ 0.33
RARA-208ENST00000577646 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
RARA-208ENST00000577646 ADAMTS2O95450 1211 aa17.11■□□□□ 0.33
RARA-208ENST00000577646 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
RARA-208ENST00000577646 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
RARA-208ENST00000577646 TTC21BQ7Z4L5 1316 aa17.11■□□□□ 0.33
RARA-208ENST00000577646 NGLY1Q96IV0 654 aa17.1■□□□□ 0.33
RARA-208ENST00000577646 AFF2P51816 1311 aa17.1■□□□□ 0.33
RARA-208ENST00000577646 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
RARA-208ENST00000577646 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
RARA-208ENST00000577646 C11orf95C9JLR9 678 aaPredicted RBP17.09■□□□□ 0.33
RARA-208ENST00000577646 LMOD2Q6P5Q4 547 aa17.09■□□□□ 0.33
RARA-208ENST00000577646 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
RARA-208ENST00000577646 MON2Q7Z3U7 1717 aa17.08■□□□□ 0.32
RARA-208ENST00000577646 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
RARA-208ENST00000577646 RXRBP28702 533 aa17.07■□□□□ 0.32
RARA-208ENST00000577646 USP31Q70CQ4 1352 aa17.06■□□□□ 0.32
RARA-208ENST00000577646 NLRP6P59044 892 aa17.05■□□□□ 0.32
RARA-208ENST00000577646 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
RARA-208ENST00000577646 MYOM1P52179 1685 aa17.04■□□□□ 0.32
RARA-208ENST00000577646 USP19O94966 1318 aa17.04■□□□□ 0.32
RARA-208ENST00000577646 NRKQ7Z2Y5 1582 aa17.04■□□□□ 0.32
RARA-208ENST00000577646 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
RARA-208ENST00000577646 KCNH5Q8NCM2 988 aa17.04■□□□□ 0.32
RARA-208ENST00000577646 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
RARA-208ENST00000577646 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
RARA-208ENST00000577646 UPF1Q92900 1129 aaKnown RBP eCLIP17.03■□□□□ 0.32
RARA-208ENST00000577646 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.32
RARA-208ENST00000577646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
RARA-208ENST00000577646 PANK3Q9H999 370 aa17.02■□□□□ 0.32
RARA-208ENST00000577646 USP21Q9UK80 565 aa17.02■□□□□ 0.32
RARA-208ENST00000577646 CARD14Q9BXL6 1004 aa17.01■□□□□ 0.31
RARA-208ENST00000577646 GCP02774 474 aa17■□□□□ 0.31
RARA-208ENST00000577646 RBM6P78332 1123 aaKnown RBP17■□□□□ 0.31
RARA-208ENST00000577646 USP54Q70EL1 1684 aa17■□□□□ 0.31
RARA-208ENST00000577646 FYB1O15117 783 aa16.99■□□□□ 0.31
RARA-208ENST00000577646 FNBP4Q8N3X1 1017 aaPredicted RBP16.99■□□□□ 0.31
RARA-208ENST00000577646 COG3Q96JB2 828 aa16.99■□□□□ 0.31
RARA-208ENST00000577646 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
RARA-208ENST00000577646 PIK3C2AO00443 1686 aa16.99■□□□□ 0.31
RARA-208ENST00000577646 CPDO75976 1380 aa16.99■□□□□ 0.31
RARA-208ENST00000577646 NSD2O96028 1365 aa16.99■□□□□ 0.31
RARA-208ENST00000577646 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
RARA-208ENST00000577646 SLIT3O75094 1523 aa16.98■□□□□ 0.31
RARA-208ENST00000577646 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
RARA-208ENST00000577646 NME9Q86XW9 330 aa16.98■□□□□ 0.31
RARA-208ENST00000577646 CABLES1Q8TDN4 633 aa16.98■□□□□ 0.31
RARA-208ENST00000577646 TRPC5Q9UL62 973 aaPredicted RBP16.98■□□□□ 0.31
RARA-208ENST00000577646 SRCAPQ6ZRS2 3230 aa16.98■□□□□ 0.31
RARA-208ENST00000577646 NUTM2GQ5VZR2 741 aa16.97■□□□□ 0.31
RARA-208ENST00000577646 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.31
RARA-208ENST00000577646 ABCA3Q99758 1704 aa16.96■□□□□ 0.3
RARA-208ENST00000577646 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.3
RARA-208ENST00000577646 OVOS2A0A0J9YW53 1432 aa16.96■□□□□ 0.3
RARA-208ENST00000577646 OVOS2Q6IE36 1432 aa16.96■□□□□ 0.3
RARA-208ENST00000577646 CDK12Q9NYV4 1490 aaPredicted RBP16.95■□□□□ 0.3
RARA-208ENST00000577646 PER1O15534 1290 aaPredicted RBP16.95■□□□□ 0.3
RARA-208ENST00000577646 NPC1L1Q9UHC9 1359 aa16.94■□□□□ 0.3
RARA-208ENST00000577646 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
RARA-208ENST00000577646 PHRF1Q9P1Y6 1649 aaKnown RBP16.94■□□□□ 0.3
RARA-208ENST00000577646 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
RARA-208ENST00000577646 FAM83GA6ND36 823 aa16.92■□□□□ 0.3
RARA-208ENST00000577646 ARHGEF25Q86VW2 580 aa16.92■□□□□ 0.3
RARA-208ENST00000577646 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
RARA-208ENST00000577646 SLIT2O94813 1529 aa16.91■□□□□ 0.3
RARA-208ENST00000577646 ABCC6O95255 1503 aa16.91■□□□□ 0.3
RARA-208ENST00000577646 KIAA0232Q92628 1395 aa16.91■□□□□ 0.3
RARA-208ENST00000577646 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
RARA-208ENST00000577646 ZC3H6P61129 1189 aaKnown RBP16.91■□□□□ 0.3
RARA-208ENST00000577646 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
RARA-208ENST00000577646 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
RARA-208ENST00000577646 KIF24Q5T7B8 1368 aa16.9■□□□□ 0.3
RARA-208ENST00000577646 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
RARA-208ENST00000577646 KIF20BQ96Q89 1820 aa16.9■□□□□ 0.3
RARA-208ENST00000577646 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
RARA-208ENST00000577646 ATRNO75882 1429 aa16.89■□□□□ 0.29
RARA-208ENST00000577646 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.29
RARA-208ENST00000577646 AMER1Q5JTC6 1135 aaPredicted RBP16.89■□□□□ 0.29
RARA-208ENST00000577646 NFAT5O94916 1531 aa16.89■□□□□ 0.29
RARA-208ENST00000577646 GJD4Q96KN9 370 aaPredicted RBP16.88■□□□□ 0.29
RARA-208ENST00000577646 RGS12O14924 1447 aa16.87■□□□□ 0.29
RARA-208ENST00000577646 BTG4Q9NY30 223 aa16.87■□□□□ 0.29
RARA-208ENST00000577646 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
RARA-208ENST00000577646 CCDC9Q9Y3X0 531 aaKnown RBP16.86■□□□□ 0.29
RARA-208ENST00000577646 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms