RNA–Protein interactions for RNA: ENST00000577561.1

NUP85-205, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-205ENST00000577561 QTRT2Q9H974 415 aaKnown RBP27.56■■■□□ 2
NUP85-205ENST00000577561 USP21Q9UK80 565 aa27.56■■■□□ 2
NUP85-205ENST00000577561 RXRBP28702 533 aa27.55■■■□□ 2
NUP85-205ENST00000577561 ATAD2Q6PL18 1390 aa27.52■■■□□ 2
NUP85-205ENST00000577561 ABCA3Q99758 1704 aa27.52■■■□□ 2
NUP85-205ENST00000577561 ST20-MTHFSA0A0A6YYL1 179 aa27.51■■□□□ 1.99
NUP85-205ENST00000577561 BRD4O60885 1362 aaPredicted RBP27.5■■□□□ 1.99
NUP85-205ENST00000577561 BCL9LQ86UU0 1499 aa27.5■■□□□ 1.99
NUP85-205ENST00000577561 RBM6P78332 1123 aaKnown RBP27.49■■□□□ 1.99
NUP85-205ENST00000577561 TESK2Q96S53 571 aa27.49■■□□□ 1.99
NUP85-205ENST00000577561 TRPC5Q9UL62 973 aaPredicted RBP27.49■■□□□ 1.99
NUP85-205ENST00000577561 SLIT2O94813 1529 aa27.47■■□□□ 1.99
NUP85-205ENST00000577561 SLC24A1O60721 1099 aa27.47■■□□□ 1.99
NUP85-205ENST00000577561 USP6P35125 1406 aa27.47■■□□□ 1.99
NUP85-205ENST00000577561 ABTB2Q8N961 1025 aa27.46■■□□□ 1.99
NUP85-205ENST00000577561 ATRNO75882 1429 aa27.46■■□□□ 1.99
NUP85-205ENST00000577561 USP47Q96K76 1375 aa27.46■■□□□ 1.99
NUP85-205ENST00000577561 CDK12Q9NYV4 1490 aaPredicted RBP27.45■■□□□ 1.99
NUP85-205ENST00000577561 NUTM2GQ5VZR2 741 aa27.45■■□□□ 1.98
NUP85-205ENST00000577561 PUS7Q96PZ0 661 aaKnown RBP27.45■■□□□ 1.98
NUP85-205ENST00000577561 ZNF692Q9BU19 519 aaPredicted RBP27.45■■□□□ 1.98
NUP85-205ENST00000577561 CRYBG1Q9Y4K1 1723 aa27.44■■□□□ 1.98
NUP85-205ENST00000577561 FAM83GA6ND36 823 aa27.44■■□□□ 1.98
NUP85-205ENST00000577561 UNC5CLQ8IV45 518 aa27.44■■□□□ 1.98
NUP85-205ENST00000577561 SSH2Q76I76 1423 aa27.42■■□□□ 1.98
NUP85-205ENST00000577561 CPSF1Q10570 1443 aaKnown RBP27.41■■□□□ 1.98
NUP85-205ENST00000577561 NLRP13Q86W25 1043 aa27.4■■□□□ 1.98
NUP85-205ENST00000577561 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.4■■□□□ 1.98
NUP85-205ENST00000577561 USP19O94966 1318 aa27.39■■□□□ 1.97
NUP85-205ENST00000577561 AKAP12Q02952 1782 aa27.37■■□□□ 1.97
NUP85-205ENST00000577561 PLCH1Q4KWH8 1693 aa27.37■■□□□ 1.97
NUP85-205ENST00000577561 TMC1Q8TDI8 760 aa27.37■■□□□ 1.97
NUP85-205ENST00000577561 GJD4Q96KN9 370 aaPredicted RBP27.37■■□□□ 1.97
NUP85-205ENST00000577561 NWD2Q9ULI1 1742 aa27.37■■□□□ 1.97
NUP85-205ENST00000577561 PHRF1Q9P1Y6 1649 aaKnown RBP27.37■■□□□ 1.97
NUP85-205ENST00000577561 TTC21BQ7Z4L5 1316 aa27.37■■□□□ 1.97
NUP85-205ENST00000577561 KTN1Q86UP2 1357 aaKnown RBP27.36■■□□□ 1.97
NUP85-205ENST00000577561 RGS12O14924 1447 aa27.36■■□□□ 1.97
NUP85-205ENST00000577561 SLC12A5Q9H2X9 1139 aa27.36■■□□□ 1.97
NUP85-205ENST00000577561 PRDM11Q9NQV5 511 aa27.36■■□□□ 1.97
NUP85-205ENST00000577561 COL14A1Q05707 1796 aaKnown RBP27.35■■□□□ 1.97
NUP85-205ENST00000577561 NLRP6P59044 892 aa27.35■■□□□ 1.97
NUP85-205ENST00000577561 KIAA0232Q92628 1395 aa27.35■■□□□ 1.97
NUP85-205ENST00000577561 CD163L1Q9NR16 1453 aa27.34■■□□□ 1.97
NUP85-205ENST00000577561 ZC3H6P61129 1189 aaKnown RBP27.34■■□□□ 1.97
NUP85-205ENST00000577561 TMF1P82094 1093 aa27.34■■□□□ 1.97
NUP85-205ENST00000577561 VPS72Q15906 364 aa27.34■■□□□ 1.97
NUP85-205ENST00000577561 BTG4Q9NY30 223 aa27.34■■□□□ 1.97
NUP85-205ENST00000577561 TTC21AQ8NDW8 1320 aa27.33■■□□□ 1.97
NUP85-205ENST00000577561 GCP02774 474 aa27.32■■□□□ 1.96
NUP85-205ENST00000577561 HDGFL2Q7Z4V5 671 aaPredicted RBP27.32■■□□□ 1.96
NUP85-205ENST00000577561 NRKQ7Z2Y5 1582 aa27.31■■□□□ 1.96
NUP85-205ENST00000577561 TERF2IPQ9NYB0 399 aa27.31■■□□□ 1.96
NUP85-205ENST00000577561 NINLQ9Y2I6 1382 aa27.31■■□□□ 1.96
NUP85-205ENST00000577561 PIK3C2AO00443 1686 aa27.3■■□□□ 1.96
NUP85-205ENST00000577561 MON2Q7Z3U7 1717 aa27.3■■□□□ 1.96
NUP85-205ENST00000577561 CHRNA2Q15822 529 aa27.29■■□□□ 1.96
NUP85-205ENST00000577561 CPDO75976 1380 aa27.29■■□□□ 1.96
NUP85-205ENST00000577561 NRAPQ86VF7 1730 aa27.27■■□□□ 1.96
NUP85-205ENST00000577561 GLI3P10071 1580 aa27.27■■□□□ 1.96
NUP85-205ENST00000577561 SLIT3O75094 1523 aa27.26■■□□□ 1.96
NUP85-205ENST00000577561 A0A1W2PP64 1363 aa27.26■■□□□ 1.95
NUP85-205ENST00000577561 CDCA8Q53HL2 280 aa27.26■■□□□ 1.95
NUP85-205ENST00000577561 CCDC9Q9Y3X0 531 aaKnown RBP27.26■■□□□ 1.95
NUP85-205ENST00000577561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.25■■□□□ 1.95
NUP85-205ENST00000577561 EDC4Q6P2E9 1401 aaKnown RBP27.24■■□□□ 1.95
NUP85-205ENST00000577561 EIF4G2P78344 907 aaKnown RBP eCLIP27.22■■□□□ 1.95
NUP85-205ENST00000577561 ONECUT3O60422 494 aaPredicted RBP27.21■■□□□ 1.95
NUP85-205ENST00000577561 KCNH5Q8NCM2 988 aa27.21■■□□□ 1.95
NUP85-205ENST00000577561 USP31Q70CQ4 1352 aa27.21■■□□□ 1.95
NUP85-205ENST00000577561 NME9Q86XW9 330 aa27.2■■□□□ 1.94
NUP85-205ENST00000577561 SPATA31A5Q5VU36 1347 aa27.19■■□□□ 1.94
NUP85-205ENST00000577561 SPATA31A7Q8IWB4 1347 aa27.19■■□□□ 1.94
NUP85-205ENST00000577561 ZRANB1Q9UGI0 708 aa27.19■■□□□ 1.94
NUP85-205ENST00000577561 ANKRD36BQ8N2N9 1353 aa27.19■■□□□ 1.94
NUP85-205ENST00000577561 CAMTA1Q9Y6Y1 1673 aa27.18■■□□□ 1.94
NUP85-205ENST00000577561 UPF1Q92900 1129 aaKnown RBP eCLIP27.18■■□□□ 1.94
NUP85-205ENST00000577561 STRN4Q9NRL3 753 aa27.18■■□□□ 1.94
NUP85-205ENST00000577561 LMO7Q8WWI1 1683 aa27.17■■□□□ 1.94
NUP85-205ENST00000577561 HSPA5P11021 654 aaKnown RBP27.17■■□□□ 1.94
NUP85-205ENST00000577561 SEPT12Q8IYM1 358 aa27.17■■□□□ 1.94
NUP85-205ENST00000577561 AATKQ6ZMQ8 1374 aa27.17■■□□□ 1.94
NUP85-205ENST00000577561 EVA1CP58658 441 aa27.16■■□□□ 1.94
NUP85-205ENST00000577561 ZBTB7CA1YPR0 619 aa27.15■■□□□ 1.94
NUP85-205ENST00000577561 ARHGEF25Q86VW2 580 aa27.15■■□□□ 1.94
NUP85-205ENST00000577561 USP54Q70EL1 1684 aa27.14■■□□□ 1.94
NUP85-205ENST00000577561 SOX12O15370 315 aa27.14■■□□□ 1.94
NUP85-205ENST00000577561 FAM98CQ17RN3 349 aaKnown RBP27.14■■□□□ 1.94
NUP85-205ENST00000577561 SPATA31A1Q5TZJ5 1347 aa27.14■■□□□ 1.93
NUP85-205ENST00000577561 NFAT5O94916 1531 aa27.13■■□□□ 1.93
NUP85-205ENST00000577561 EP400Q96L91 3159 aa27.13■■□□□ 1.93
NUP85-205ENST00000577561 LARP1Q6PKG0 1096 aaKnown RBP27.11■■□□□ 1.93
NUP85-205ENST00000577561 COL5A2P05997 1499 aaPredicted RBP27.11■■□□□ 1.93
NUP85-205ENST00000577561 COL18A1P39060 1754 aa27.09■■□□□ 1.93
NUP85-205ENST00000577561 OVOS2A0A0J9YW53 1432 aa27.09■■□□□ 1.93
NUP85-205ENST00000577561 OVOS2Q6IE36 1432 aa27.09■■□□□ 1.93
NUP85-205ENST00000577561 A0A0G2JS52 829 aa27.08■■□□□ 1.93
NUP85-205ENST00000577561 MYT1Q01538 1121 aa27.08■■□□□ 1.93
NUP85-205ENST00000577561 AXIN2Q9Y2T1 843 aa27.08■■□□□ 1.93
NUP85-205ENST00000577561 BRWD3Q6RI45 1802 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms