RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 AKAP12Q02952 1782 aa18.23■□□□□ 0.51
SSH2-205ENST00000577483 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
SSH2-205ENST00000577483 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
SSH2-205ENST00000577483 PPIP5K1Q6PFW1 1433 aa18.2■□□□□ 0.5
SSH2-205ENST00000577483 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
SSH2-205ENST00000577483 EP400Q96L91 3159 aa18.2■□□□□ 0.5
SSH2-205ENST00000577483 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
SSH2-205ENST00000577483 NRKQ7Z2Y5 1582 aa18.19■□□□□ 0.5
SSH2-205ENST00000577483 RALGAPBQ86X10 1494 aa18.19■□□□□ 0.5
SSH2-205ENST00000577483 ACEP12821 1306 aa18.19■□□□□ 0.5
SSH2-205ENST00000577483 TONSLQ96HA7 1378 aa18.18■□□□□ 0.5
SSH2-205ENST00000577483 PAK3O75914 559 aaPredicted RBP18.18■□□□□ 0.5
SSH2-205ENST00000577483 UPF1Q92900 1129 aaKnown RBP eCLIP18.18■□□□□ 0.5
SSH2-205ENST00000577483 CABP2Q9NPB3 220 aa18.18■□□□□ 0.5
SSH2-205ENST00000577483 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
SSH2-205ENST00000577483 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
SSH2-205ENST00000577483 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
SSH2-205ENST00000577483 PIK3C2AO00443 1686 aa18.16■□□□□ 0.5
SSH2-205ENST00000577483 GJD4Q96KN9 370 aaPredicted RBP18.16■□□□□ 0.5
SSH2-205ENST00000577483 MON2Q7Z3U7 1717 aa18.15■□□□□ 0.5
SSH2-205ENST00000577483 FAM83GA6ND36 823 aa18.15■□□□□ 0.5
SSH2-205ENST00000577483 LMO7Q8WWI1 1683 aa18.13■□□□□ 0.49
SSH2-205ENST00000577483 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
SSH2-205ENST00000577483 USP6P35125 1406 aa18.11■□□□□ 0.49
SSH2-205ENST00000577483 NUTM2GQ5VZR2 741 aa18.11■□□□□ 0.49
SSH2-205ENST00000577483 SBNO2Q9Y2G9 1366 aa18.1■□□□□ 0.49
SSH2-205ENST00000577483 VPS72Q15906 364 aa18.1■□□□□ 0.49
SSH2-205ENST00000577483 ATAD2Q6PL18 1390 aa18.09■□□□□ 0.49
SSH2-205ENST00000577483 CABP1Q9NZU7 370 aa18.09■□□□□ 0.49
SSH2-205ENST00000577483 KIAA0232Q92628 1395 aa18.09■□□□□ 0.49
SSH2-205ENST00000577483 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
SSH2-205ENST00000577483 BTG4Q9NY30 223 aa18.09■□□□□ 0.49
SSH2-205ENST00000577483 THSD7AQ9UPZ6 1657 aa18.08■□□□□ 0.49
SSH2-205ENST00000577483 SSH2Q76I76 1423 aa18.08■□□□□ 0.49
SSH2-205ENST00000577483 RGPD5Q99666 1765 aa18.07■□□□□ 0.48
SSH2-205ENST00000577483 SLIT3O75094 1523 aa18.07■□□□□ 0.48
SSH2-205ENST00000577483 ABTB2Q8N961 1025 aa18.07■□□□□ 0.48
SSH2-205ENST00000577483 USP19O94966 1318 aa18.07■□□□□ 0.48
SSH2-205ENST00000577483 PRDM11Q9NQV5 511 aa18.06■□□□□ 0.48
SSH2-205ENST00000577483 USP54Q70EL1 1684 aa18.05■□□□□ 0.48
SSH2-205ENST00000577483 COL18A1P39060 1754 aa18.05■□□□□ 0.48
SSH2-205ENST00000577483 BRD4O60885 1362 aaPredicted RBP18.05■□□□□ 0.48
SSH2-205ENST00000577483 CAMTA1Q9Y6Y1 1673 aa18.05■□□□□ 0.48
SSH2-205ENST00000577483 CCDC9Q9Y3X0 531 aaKnown RBP18.05■□□□□ 0.48
SSH2-205ENST00000577483 ZC3H6P61129 1189 aaKnown RBP18.04■□□□□ 0.48
SSH2-205ENST00000577483 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
SSH2-205ENST00000577483 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
SSH2-205ENST00000577483 CD163L1Q9NR16 1453 aa18.03■□□□□ 0.48
SSH2-205ENST00000577483 WNK3Q9BYP7 1800 aa18.02■□□□□ 0.48
SSH2-205ENST00000577483 ONECUT3O60422 494 aaPredicted RBP18.02■□□□□ 0.48
SSH2-205ENST00000577483 SEPT12Q8IYM1 358 aa18.02■□□□□ 0.48
SSH2-205ENST00000577483 CPDO75976 1380 aa18.01■□□□□ 0.47
SSH2-205ENST00000577483 LTN1O94822 1766 aa18.01■□□□□ 0.47
SSH2-205ENST00000577483 SPATA31A5Q5VU36 1347 aa18■□□□□ 0.47
SSH2-205ENST00000577483 SPATA31A7Q8IWB4 1347 aa18■□□□□ 0.47
SSH2-205ENST00000577483 NLRP13Q86W25 1043 aa18■□□□□ 0.47
SSH2-205ENST00000577483 FAM98CQ17RN3 349 aaKnown RBP17.99■□□□□ 0.47
SSH2-205ENST00000577483 GCP02774 474 aa17.98■□□□□ 0.47
SSH2-205ENST00000577483 COL5A2P05997 1499 aaPredicted RBP17.98■□□□□ 0.47
SSH2-205ENST00000577483 RGPD1P0DJD0 1748 aa17.98■□□□□ 0.47
SSH2-205ENST00000577483 TNS1Q9HBL0 1735 aaKnown RBP17.98■□□□□ 0.47
SSH2-205ENST00000577483 KTN1Q86UP2 1357 aaKnown RBP17.98■□□□□ 0.47
SSH2-205ENST00000577483 NFAT5O94916 1531 aa17.97■□□□□ 0.47
SSH2-205ENST00000577483 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
SSH2-205ENST00000577483 NLRP6P59044 892 aa17.97■□□□□ 0.47
SSH2-205ENST00000577483 STRN4Q9NRL3 753 aa17.97■□□□□ 0.47
SSH2-205ENST00000577483 PARP4Q9UKK3 1724 aaKnown RBP17.97■□□□□ 0.47
SSH2-205ENST00000577483 SPATA31A1Q5TZJ5 1347 aa17.96■□□□□ 0.47
SSH2-205ENST00000577483 TESK2Q96S53 571 aa17.96■□□□□ 0.47
SSH2-205ENST00000577483 ZNF692Q9BU19 519 aaPredicted RBP17.96■□□□□ 0.47
SSH2-205ENST00000577483 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
SSH2-205ENST00000577483 ST20-MTHFSA0A0A6YYL1 179 aa17.95■□□□□ 0.46
SSH2-205ENST00000577483 A0A0G2JS52 829 aa17.94■□□□□ 0.46
SSH2-205ENST00000577483 MYT1Q01538 1121 aa17.94■□□□□ 0.46
SSH2-205ENST00000577483 KRT27Q7Z3Y8 459 aa17.94■□□□□ 0.46
SSH2-205ENST00000577483 BLMP54132 1417 aaPredicted RBP17.94■□□□□ 0.46
SSH2-205ENST00000577483 MYOM1P52179 1685 aa17.94■□□□□ 0.46
SSH2-205ENST00000577483 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
SSH2-205ENST00000577483 USP47Q96K76 1375 aa17.93■□□□□ 0.46
SSH2-205ENST00000577483 CLSPNQ9HAW4 1339 aa17.92■□□□□ 0.46
SSH2-205ENST00000577483 LRRC37A3O60309 1634 aa17.92■□□□□ 0.46
SSH2-205ENST00000577483 LARP1Q6PKG0 1096 aaKnown RBP17.92■□□□□ 0.46
SSH2-205ENST00000577483 SLC12A5Q9H2X9 1139 aa17.92■□□□□ 0.46
SSH2-205ENST00000577483 A0A1W2PP64 1363 aa17.92■□□□□ 0.46
SSH2-205ENST00000577483 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
SSH2-205ENST00000577483 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
SSH2-205ENST00000577483 CCDC125Q86Z20 511 aa17.9■□□□□ 0.46
SSH2-205ENST00000577483 USP35Q9P2H5 1018 aa17.9■□□□□ 0.46
SSH2-205ENST00000577483 EDC4Q6P2E9 1401 aaKnown RBP17.9■□□□□ 0.46
SSH2-205ENST00000577483 ZBTB7CA1YPR0 619 aa17.9■□□□□ 0.46
SSH2-205ENST00000577483 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
SSH2-205ENST00000577483 ABCC6O95255 1503 aa17.9■□□□□ 0.46
SSH2-205ENST00000577483 SBF2Q86WG5 1849 aa17.89■□□□□ 0.45
SSH2-205ENST00000577483 KIF20BQ96Q89 1820 aa17.89■□□□□ 0.45
SSH2-205ENST00000577483 EVA1CP58658 441 aa17.89■□□□□ 0.45
SSH2-205ENST00000577483 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
SSH2-205ENST00000577483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.89■□□□□ 0.45
SSH2-205ENST00000577483 PUS7Q96PZ0 661 aaKnown RBP17.89■□□□□ 0.45
SSH2-205ENST00000577483 CRB1P82279 1406 aa17.89■□□□□ 0.45
SSH2-205ENST00000577483 USP31Q70CQ4 1352 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms