RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-223ENST00000575701 USP47Q96K76 1375 aa35.69■■■■□ 3.3
SRRM2-223ENST00000575701 ST20-MTHFSA0A0A6YYL1 179 aa35.67■■■■□ 3.3
SRRM2-223ENST00000575701 FNBP4Q8N3X1 1017 aaPredicted RBP35.67■■■■□ 3.3
SRRM2-223ENST00000575701 CRYBG1Q9Y4K1 1723 aa35.66■■■■□ 3.3
SRRM2-223ENST00000575701 SOCS7O14512 581 aa35.65■■■■□ 3.3
SRRM2-223ENST00000575701 CABLES1Q8TDN4 633 aa35.65■■■■□ 3.3
SRRM2-223ENST00000575701 PUS7Q96PZ0 661 aaKnown RBP35.65■■■■□ 3.3
SRRM2-223ENST00000575701 TESK2Q96S53 571 aa35.65■■■■□ 3.3
SRRM2-223ENST00000575701 USP6P35125 1406 aa35.65■■■■□ 3.3
SRRM2-223ENST00000575701 USP21Q9UK80 565 aa35.63■■■■□ 3.29
SRRM2-223ENST00000575701 AKAP12Q02952 1782 aa35.62■■■■□ 3.29
SRRM2-223ENST00000575701 ZNF692Q9BU19 519 aaPredicted RBP35.61■■■■□ 3.29
SRRM2-223ENST00000575701 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.59■■■■□ 3.29
SRRM2-223ENST00000575701 SLIT2O94813 1529 aa35.58■■■■□ 3.29
SRRM2-223ENST00000575701 PLEKHG5O94827 1062 aa35.58■■■■□ 3.29
SRRM2-223ENST00000575701 PHRF1Q9P1Y6 1649 aaKnown RBP35.57■■■■□ 3.29
SRRM2-223ENST00000575701 RXRBP28702 533 aa35.57■■■■□ 3.28
SRRM2-223ENST00000575701 ABTB2Q8N961 1025 aa35.57■■■■□ 3.28
SRRM2-223ENST00000575701 QTRT2Q9H974 415 aaKnown RBP35.57■■■■□ 3.28
SRRM2-223ENST00000575701 CPSF1Q10570 1443 aaKnown RBP35.57■■■■□ 3.28
SRRM2-223ENST00000575701 BCL9LQ86UU0 1499 aa35.56■■■■□ 3.28
SRRM2-223ENST00000575701 CDK12Q9NYV4 1490 aaPredicted RBP35.56■■■■□ 3.28
SRRM2-223ENST00000575701 TRPC5Q9UL62 973 aaPredicted RBP35.56■■■■□ 3.28
SRRM2-223ENST00000575701 SSH2Q76I76 1423 aa35.56■■■■□ 3.28
SRRM2-223ENST00000575701 NWD2Q9ULI1 1742 aa35.55■■■■□ 3.28
SRRM2-223ENST00000575701 PLCH1Q4KWH8 1693 aa35.54■■■■□ 3.28
SRRM2-223ENST00000575701 NINLQ9Y2I6 1382 aa35.53■■■■□ 3.28
SRRM2-223ENST00000575701 ATRNO75882 1429 aa35.53■■■■□ 3.28
SRRM2-223ENST00000575701 RBM6P78332 1123 aaKnown RBP35.53■■■■□ 3.28
SRRM2-223ENST00000575701 MON2Q7Z3U7 1717 aa35.52■■■■□ 3.28
SRRM2-223ENST00000575701 TMF1P82094 1093 aa35.52■■■■□ 3.28
SRRM2-223ENST00000575701 NRKQ7Z2Y5 1582 aa35.51■■■■□ 3.28
SRRM2-223ENST00000575701 COL14A1Q05707 1796 aaKnown RBP35.51■■■■□ 3.28
SRRM2-223ENST00000575701 NLRP13Q86W25 1043 aa35.5■■■■□ 3.27
SRRM2-223ENST00000575701 KTN1Q86UP2 1357 aaKnown RBP35.5■■■■□ 3.27
SRRM2-223ENST00000575701 NUTM2GQ5VZR2 741 aa35.49■■■■□ 3.27
SRRM2-223ENST00000575701 UNC5CLQ8IV45 518 aa35.49■■■■□ 3.27
SRRM2-223ENST00000575701 TMC1Q8TDI8 760 aa35.49■■■■□ 3.27
SRRM2-223ENST00000575701 USP19O94966 1318 aa35.49■■■■□ 3.27
SRRM2-223ENST00000575701 TTC21AQ8NDW8 1320 aa35.48■■■■□ 3.27
SRRM2-223ENST00000575701 PIK3C2AO00443 1686 aa35.47■■■■□ 3.27
SRRM2-223ENST00000575701 CD163L1Q9NR16 1453 aa35.47■■■■□ 3.27
SRRM2-223ENST00000575701 CDCA8Q53HL2 280 aa35.46■■■■□ 3.27
SRRM2-223ENST00000575701 HDGFL2Q7Z4V5 671 aaPredicted RBP35.46■■■■□ 3.27
SRRM2-223ENST00000575701 FAM83GA6ND36 823 aa35.45■■■■□ 3.27
SRRM2-223ENST00000575701 TERF2IPQ9NYB0 399 aa35.45■■■■□ 3.27
SRRM2-223ENST00000575701 TTC21BQ7Z4L5 1316 aa35.45■■■■□ 3.27
SRRM2-223ENST00000575701 SLC12A5Q9H2X9 1139 aa35.43■■■■□ 3.26
SRRM2-223ENST00000575701 PRDM11Q9NQV5 511 aa35.43■■■■□ 3.26
SRRM2-223ENST00000575701 NRAPQ86VF7 1730 aa35.41■■■■□ 3.26
SRRM2-223ENST00000575701 NLRP6P59044 892 aa35.41■■■■□ 3.26
SRRM2-223ENST00000575701 SLIT3O75094 1523 aa35.41■■■■□ 3.26
SRRM2-223ENST00000575701 KIAA0232Q92628 1395 aa35.4■■■■□ 3.26
SRRM2-223ENST00000575701 EDC4Q6P2E9 1401 aaKnown RBP35.39■■■■□ 3.26
SRRM2-223ENST00000575701 A0A1W2PP64 1363 aa35.38■■■■□ 3.26
SRRM2-223ENST00000575701 CPDO75976 1380 aa35.38■■■■□ 3.26
SRRM2-223ENST00000575701 EIF4G2P78344 907 aaKnown RBP eCLIP35.38■■■■□ 3.25
SRRM2-223ENST00000575701 GJD4Q96KN9 370 aaPredicted RBP35.38■■■■□ 3.25
SRRM2-223ENST00000575701 RGS12O14924 1447 aa35.38■■■■□ 3.25
SRRM2-223ENST00000575701 GCP02774 474 aa35.36■■■■□ 3.25
SRRM2-223ENST00000575701 VPS72Q15906 364 aa35.36■■■■□ 3.25
SRRM2-223ENST00000575701 BTG4Q9NY30 223 aa35.36■■■■□ 3.25
SRRM2-223ENST00000575701 ZC3H6P61129 1189 aaKnown RBP35.35■■■■□ 3.25
SRRM2-223ENST00000575701 USP54Q70EL1 1684 aa35.34■■■■□ 3.25
SRRM2-223ENST00000575701 GLI3P10071 1580 aa35.33■■■■□ 3.25
SRRM2-223ENST00000575701 ANKRD36BQ8N2N9 1353 aa35.32■■■■□ 3.24
SRRM2-223ENST00000575701 USP31Q70CQ4 1352 aa35.3■■■■□ 3.24
SRRM2-223ENST00000575701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.29■■■■□ 3.24
SRRM2-223ENST00000575701 KCNH5Q8NCM2 988 aa35.29■■■■□ 3.24
SRRM2-223ENST00000575701 LMO7Q8WWI1 1683 aa35.28■■■■□ 3.24
SRRM2-223ENST00000575701 CHRNA2Q15822 529 aa35.28■■■■□ 3.24
SRRM2-223ENST00000575701 HSPA5P11021 654 aaKnown RBP35.27■■■■□ 3.24
SRRM2-223ENST00000575701 CCDC9Q9Y3X0 531 aaKnown RBP35.26■■■■□ 3.24
SRRM2-223ENST00000575701 MYOM1P52179 1685 aa35.25■■■■□ 3.23
SRRM2-223ENST00000575701 NME9Q86XW9 330 aa35.22■■■■□ 3.23
SRRM2-223ENST00000575701 NFAT5O94916 1531 aa35.22■■■■□ 3.23
SRRM2-223ENST00000575701 AATKQ6ZMQ8 1374 aa35.21■■■■□ 3.23
SRRM2-223ENST00000575701 CAMTA1Q9Y6Y1 1673 aa35.21■■■■□ 3.23
SRRM2-223ENST00000575701 SPATA31A5Q5VU36 1347 aa35.18■■■■□ 3.22
SRRM2-223ENST00000575701 SPATA31A7Q8IWB4 1347 aa35.18■■■■□ 3.22
SRRM2-223ENST00000575701 OVOS2A0A0J9YW53 1432 aa35.17■■■■□ 3.22
SRRM2-223ENST00000575701 OVOS2Q6IE36 1432 aa35.17■■■■□ 3.22
SRRM2-223ENST00000575701 ABCC6O95255 1503 aa35.16■■■■□ 3.22
SRRM2-223ENST00000575701 ONECUT3O60422 494 aaPredicted RBP35.16■■■■□ 3.22
SRRM2-223ENST00000575701 EVA1CP58658 441 aa35.15■■■■□ 3.22
SRRM2-223ENST00000575701 ARHGEF25Q86VW2 580 aa35.15■■■■□ 3.22
SRRM2-223ENST00000575701 STRN4Q9NRL3 753 aa35.15■■■■□ 3.22
SRRM2-223ENST00000575701 ZRANB1Q9UGI0 708 aa35.15■■■■□ 3.22
SRRM2-223ENST00000575701 COL18A1P39060 1754 aa35.15■■■■□ 3.22
SRRM2-223ENST00000575701 COL5A2P05997 1499 aaPredicted RBP35.15■■■■□ 3.22
SRRM2-223ENST00000575701 ZBTB7CA1YPR0 619 aa35.13■■■■□ 3.21
SRRM2-223ENST00000575701 SOX12O15370 315 aa35.12■■■■□ 3.21
SRRM2-223ENST00000575701 SPATA31A1Q5TZJ5 1347 aa35.11■■■■□ 3.21
SRRM2-223ENST00000575701 SEPT12Q8IYM1 358 aa35.09■■■■□ 3.21
SRRM2-223ENST00000575701 COG3Q96JB2 828 aa35.09■■■■□ 3.21
SRRM2-223ENST00000575701 KIF20BQ96Q89 1820 aa35.07■■■■□ 3.2
SRRM2-223ENST00000575701 FAM98CQ17RN3 349 aaKnown RBP35.07■■■■□ 3.2
SRRM2-223ENST00000575701 LTN1O94822 1766 aa35.06■■■■□ 3.2
SRRM2-223ENST00000575701 THSD7AQ9UPZ6 1657 aa35.06■■■■□ 3.2
SRRM2-223ENST00000575701 POLR3GLQ9BT43 218 aa35.06■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms