RNA–Protein interactions for RNA: ENST00000575693.1

AC003965.1-201, humanhuman

TSL 3 BASIC

Gene AC003965.1, Length 667 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003965.1-201ENST00000575693 TRPM1Q7Z4N2 1603 aa13.18□□□□□ -0.3
AC003965.1-201ENST00000575693 NEUROD1Q13562 356 aa13.18□□□□□ -0.3
AC003965.1-201ENST00000575693 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
AC003965.1-201ENST00000575693 NRAPQ86VF7 1730 aa13.17□□□□□ -0.3
AC003965.1-201ENST00000575693 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
AC003965.1-201ENST00000575693 FAM83GA6ND36 823 aa13.16□□□□□ -0.3
AC003965.1-201ENST00000575693 CCDC9Q9Y3X0 531 aaKnown RBP13.16□□□□□ -0.3
AC003965.1-201ENST00000575693 CCDC61Q9Y6R9 512 aa13.16□□□□□ -0.3
AC003965.1-201ENST00000575693 PHRF1Q9P1Y6 1649 aaKnown RBP13.15□□□□□ -0.3
AC003965.1-201ENST00000575693 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
AC003965.1-201ENST00000575693 VPS72Q15906 364 aa13.15□□□□□ -0.3
AC003965.1-201ENST00000575693 ACEP12821 1306 aa13.14□□□□□ -0.31
AC003965.1-201ENST00000575693 ADRA2BP18089 450 aa13.14□□□□□ -0.31
AC003965.1-201ENST00000575693 POLR3AO14802 1390 aaPredicted RBP13.14□□□□□ -0.31
AC003965.1-201ENST00000575693 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
AC003965.1-201ENST00000575693 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
AC003965.1-201ENST00000575693 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
AC003965.1-201ENST00000575693 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
AC003965.1-201ENST00000575693 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
AC003965.1-201ENST00000575693 ROCK2O75116 1388 aaKnown RBP13.11□□□□□ -0.31
AC003965.1-201ENST00000575693 NUTM2GQ5VZR2 741 aa13.11□□□□□ -0.31
AC003965.1-201ENST00000575693 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
AC003965.1-201ENST00000575693 PRDM11Q9NQV5 511 aa13.11□□□□□ -0.31
AC003965.1-201ENST00000575693 A0A0G2JS52 829 aa13.1□□□□□ -0.31
AC003965.1-201ENST00000575693 MYT1Q01538 1121 aa13.1□□□□□ -0.31
AC003965.1-201ENST00000575693 CCDC125Q86Z20 511 aa13.1□□□□□ -0.31
AC003965.1-201ENST00000575693 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
AC003965.1-201ENST00000575693 KIAA0232Q92628 1395 aa13.08□□□□□ -0.31
AC003965.1-201ENST00000575693 NRKQ7Z2Y5 1582 aa13.08□□□□□ -0.32
AC003965.1-201ENST00000575693 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
AC003965.1-201ENST00000575693 EVC2Q86UK5 1308 aa13.08□□□□□ -0.32
AC003965.1-201ENST00000575693 ZC3H6P61129 1189 aaKnown RBP13.07□□□□□ -0.32
AC003965.1-201ENST00000575693 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
AC003965.1-201ENST00000575693 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
AC003965.1-201ENST00000575693 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
AC003965.1-201ENST00000575693 CABP1Q9NZU7 370 aa13.07□□□□□ -0.32
AC003965.1-201ENST00000575693 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
AC003965.1-201ENST00000575693 SPATA31A5Q5VU36 1347 aa13.06□□□□□ -0.32
AC003965.1-201ENST00000575693 SPATA31A7Q8IWB4 1347 aa13.06□□□□□ -0.32
AC003965.1-201ENST00000575693 TONSLQ96HA7 1378 aa13.06□□□□□ -0.32
AC003965.1-201ENST00000575693 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
AC003965.1-201ENST00000575693 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
AC003965.1-201ENST00000575693 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
AC003965.1-201ENST00000575693 STRN4Q9NRL3 753 aa13.05□□□□□ -0.32
AC003965.1-201ENST00000575693 BRD4O60885 1362 aaPredicted RBP13.05□□□□□ -0.32
AC003965.1-201ENST00000575693 USP6P35125 1406 aa13.05□□□□□ -0.32
AC003965.1-201ENST00000575693 SF3B2Q13435 895 aaKnown RBP13.04□□□□□ -0.32
AC003965.1-201ENST00000575693 THSD7AQ9UPZ6 1657 aa13.04□□□□□ -0.32
AC003965.1-201ENST00000575693 PIK3C2AO00443 1686 aa13.03□□□□□ -0.32
AC003965.1-201ENST00000575693 LMO7Q8WWI1 1683 aa13.03□□□□□ -0.32
AC003965.1-201ENST00000575693 EVA1CP58658 441 aa13.03□□□□□ -0.32
AC003965.1-201ENST00000575693 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
AC003965.1-201ENST00000575693 USP19O94966 1318 aa13.03□□□□□ -0.32
AC003965.1-201ENST00000575693 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.32
AC003965.1-201ENST00000575693 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.32
AC003965.1-201ENST00000575693 GCP02774 474 aa13.02□□□□□ -0.33
AC003965.1-201ENST00000575693 NLRP6P59044 892 aa13.02□□□□□ -0.33
AC003965.1-201ENST00000575693 USP35Q9P2H5 1018 aa13.02□□□□□ -0.33
AC003965.1-201ENST00000575693 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
AC003965.1-201ENST00000575693 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.33
AC003965.1-201ENST00000575693 CPDO75976 1380 aa13.02□□□□□ -0.33
AC003965.1-201ENST00000575693 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
AC003965.1-201ENST00000575693 MON2Q7Z3U7 1717 aa13.01□□□□□ -0.33
AC003965.1-201ENST00000575693 RGPD5Q99666 1765 aa13□□□□□ -0.33
AC003965.1-201ENST00000575693 ZBTB7CA1YPR0 619 aa13□□□□□ -0.33
AC003965.1-201ENST00000575693 FAM182BQ5T319 152 aa13□□□□□ -0.33
AC003965.1-201ENST00000575693 DEFB132Q7Z7B7 95 aa13□□□□□ -0.33
AC003965.1-201ENST00000575693 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
AC003965.1-201ENST00000575693 SLIT3O75094 1523 aa12.99□□□□□ -0.33
AC003965.1-201ENST00000575693 SBNO2Q9Y2G9 1366 aa12.99□□□□□ -0.33
AC003965.1-201ENST00000575693 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
AC003965.1-201ENST00000575693 COL5A2P05997 1499 aaPredicted RBP12.97□□□□□ -0.33
AC003965.1-201ENST00000575693 COL18A1P39060 1754 aa12.97□□□□□ -0.33
AC003965.1-201ENST00000575693 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
AC003965.1-201ENST00000575693 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
AC003965.1-201ENST00000575693 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
AC003965.1-201ENST00000575693 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.33
AC003965.1-201ENST00000575693 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.33
AC003965.1-201ENST00000575693 BAG6P46379 1132 aa12.96□□□□□ -0.33
AC003965.1-201ENST00000575693 BARGINQ6ZT62 677 aa12.96□□□□□ -0.33
AC003965.1-201ENST00000575693 TCP11L2Q8N4U5 519 aa12.96□□□□□ -0.33
AC003965.1-201ENST00000575693 SRCAPQ6ZRS2 3230 aa12.96□□□□□ -0.33
AC003965.1-201ENST00000575693 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.34
AC003965.1-201ENST00000575693 SOX12O15370 315 aa12.95□□□□□ -0.34
AC003965.1-201ENST00000575693 TMC1Q8TDI8 760 aa12.95□□□□□ -0.34
AC003965.1-201ENST00000575693 WNK3Q9BYP7 1800 aa12.95□□□□□ -0.34
AC003965.1-201ENST00000575693 AATKQ6ZMQ8 1374 aa12.94□□□□□ -0.34
AC003965.1-201ENST00000575693 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
AC003965.1-201ENST00000575693 KCNH5Q8NCM2 988 aa12.94□□□□□ -0.34
AC003965.1-201ENST00000575693 THRAP3Q9Y2W1 955 aaKnown RBP12.94□□□□□ -0.34
AC003965.1-201ENST00000575693 CRB1P82279 1406 aa12.94□□□□□ -0.34
AC003965.1-201ENST00000575693 LTN1O94822 1766 aa12.94□□□□□ -0.34
AC003965.1-201ENST00000575693 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
AC003965.1-201ENST00000575693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.93□□□□□ -0.34
AC003965.1-201ENST00000575693 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
AC003965.1-201ENST00000575693 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
AC003965.1-201ENST00000575693 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
AC003965.1-201ENST00000575693 HDGFL2Q7Z4V5 671 aaPredicted RBP12.92□□□□□ -0.34
AC003965.1-201ENST00000575693 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
AC003965.1-201ENST00000575693 TRIM37O94972 964 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms