RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PNPLA6Q8IY17 1366 aa11.48□□□□□ -0.57
NCBP3-204ENST00000574911 DLC1Q96QB1 1528 aa11.47□□□□□ -0.57
NCBP3-204ENST00000574911 U2SURPO15042 1029 aaKnown RBP11.47□□□□□ -0.57
NCBP3-204ENST00000574911 CDK19Q9BWU1 502 aa11.47□□□□□ -0.57
NCBP3-204ENST00000574911 SENP3Q9H4L4 574 aaPredicted RBP11.47□□□□□ -0.57
NCBP3-204ENST00000574911 IL16Q14005 1332 aa11.47□□□□□ -0.57
NCBP3-204ENST00000574911 AGLP35573 1532 aa11.47□□□□□ -0.57
NCBP3-204ENST00000574911 HDGFL2Q7Z4V5 671 aaPredicted RBP11.47□□□□□ -0.57
NCBP3-204ENST00000574911 KIF20BQ96Q89 1820 aa11.46□□□□□ -0.57
NCBP3-204ENST00000574911 MVPQ14764 893 aaKnown RBP11.46□□□□□ -0.57
NCBP3-204ENST00000574911 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
NCBP3-204ENST00000574911 DAXXQ9UER7 740 aaPredicted RBP11.46□□□□□ -0.57
NCBP3-204ENST00000574911 PPP6R1Q9UPN7 881 aa11.46□□□□□ -0.57
NCBP3-204ENST00000574911 CDC42BPGQ6DT37 1551 aa11.46□□□□□ -0.58
NCBP3-204ENST00000574911 TSR2Q969E8 191 aaKnown RBP11.45□□□□□ -0.58
NCBP3-204ENST00000574911 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
NCBP3-204ENST00000574911 EXOSC9Q06265 439 aaKnown RBP11.45□□□□□ -0.58
NCBP3-204ENST00000574911 CABP1Q9NZU7 370 aa11.45□□□□□ -0.58
NCBP3-204ENST00000574911 SPATA31D1Q6ZQQ2 1576 aa11.45□□□□□ -0.58
NCBP3-204ENST00000574911 A2ML1A8K2U0 1454 aa11.45□□□□□ -0.58
NCBP3-204ENST00000574911 DIAPH1O60610 1272 aaKnown RBP11.44□□□□□ -0.58
NCBP3-204ENST00000574911 DZIP1LQ8IYY4 767 aaKnown RBP11.44□□□□□ -0.58
NCBP3-204ENST00000574911 PDZRN3Q9UPQ7 1066 aa11.44□□□□□ -0.58
NCBP3-204ENST00000574911 DIP2BQ9P265 1576 aa11.44□□□□□ -0.58
NCBP3-204ENST00000574911 SETD1AO15047 1707 aaKnown RBP11.44□□□□□ -0.58
NCBP3-204ENST00000574911 SEC24BO95487 1268 aa11.44□□□□□ -0.58
NCBP3-204ENST00000574911 NFKBIBQ15653 356 aa11.44□□□□□ -0.58
NCBP3-204ENST00000574911 PNNQ9H307 717 aaKnown RBP11.44□□□□□ -0.58
NCBP3-204ENST00000574911 ATP7BP35670 1465 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 RIMBP3CA6NJZ7 1639 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 RIMBP3BA6NNM3 1639 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 RIMBP3Q9UFD9 1639 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 RIPK4P57078 832 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 CYB5RLQ6IPT4 315 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 SSH1Q8WYL5 1049 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
NCBP3-204ENST00000574911 RIMS2Q9UQ26 1411 aa11.42□□□□□ -0.58
NCBP3-204ENST00000574911 AEBP2Q6ZN18 517 aaPredicted RBP11.42□□□□□ -0.58
NCBP3-204ENST00000574911 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
NCBP3-204ENST00000574911 TRIM27P14373 513 aa11.42□□□□□ -0.58
NCBP3-204ENST00000574911 FCHSD2O94868 740 aa11.41□□□□□ -0.58
NCBP3-204ENST00000574911 LRRC7Q96NW7 1537 aa11.41□□□□□ -0.58
NCBP3-204ENST00000574911 FAM135BQ49AJ0 1406 aa11.41□□□□□ -0.58
NCBP3-204ENST00000574911 WAPLQ7Z5K2 1190 aa11.41□□□□□ -0.58
NCBP3-204ENST00000574911 ATF7IPQ6VMQ6 1270 aa11.4□□□□□ -0.58
NCBP3-204ENST00000574911 POLKQ9UBT6 870 aa11.4□□□□□ -0.58
NCBP3-204ENST00000574911 HDAC1Q13547 482 aaPredicted RBP11.4□□□□□ -0.58
NCBP3-204ENST00000574911 RSPH6AQ9H0K4 717 aa11.4□□□□□ -0.58
NCBP3-204ENST00000574911 NOB1Q9ULX3 412 aaKnown RBP11.4□□□□□ -0.58
NCBP3-204ENST00000574911 DDX19BQ9UMR2 479 aa11.39□□□□□ -0.59
NCBP3-204ENST00000574911 NRXN3Q9Y4C0 1643 aa11.39□□□□□ -0.59
NCBP3-204ENST00000574911 CPSF1Q10570 1443 aaKnown RBP11.39□□□□□ -0.59
NCBP3-204ENST00000574911 ALDH1L2Q3SY69 923 aa11.38□□□□□ -0.59
NCBP3-204ENST00000574911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.38□□□□□ -0.59
NCBP3-204ENST00000574911 PPIP5K1Q6PFW1 1433 aa11.38□□□□□ -0.59
NCBP3-204ENST00000574911 PRKAR2BP31323 418 aa11.37□□□□□ -0.59
NCBP3-204ENST00000574911 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
NCBP3-204ENST00000574911 TBC1D32Q96NH3 1257 aa11.37□□□□□ -0.59
NCBP3-204ENST00000574911 KIF16BQ96L93 1317 aa11.37□□□□□ -0.59
NCBP3-204ENST00000574911 ITPRIPQ8IWB1 547 aa11.37□□□□□ -0.59
NCBP3-204ENST00000574911 TMEM57Q8N5G2 664 aa11.37□□□□□ -0.59
NCBP3-204ENST00000574911 TSPOAP1O95153 1857 aa11.37□□□□□ -0.59
NCBP3-204ENST00000574911 WASLO00401 505 aaPredicted RBP11.37□□□□□ -0.59
NCBP3-204ENST00000574911 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
NCBP3-204ENST00000574911 FBLN1P23142 703 aa11.37□□□□□ -0.59
NCBP3-204ENST00000574911 BRPF1P55201 1214 aaPredicted RBP11.37□□□□□ -0.59
NCBP3-204ENST00000574911 BECN1Q14457 450 aa11.37□□□□□ -0.59
NCBP3-204ENST00000574911 GSE1Q14687 1217 aa11.36□□□□□ -0.59
NCBP3-204ENST00000574911 NFE2L2Q16236 605 aa11.36□□□□□ -0.59
NCBP3-204ENST00000574911 ZBTB40Q9NUA8 1239 aa11.36□□□□□ -0.59
NCBP3-204ENST00000574911 SMC5Q8IY18 1101 aa11.36□□□□□ -0.59
NCBP3-204ENST00000574911 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
NCBP3-204ENST00000574911 UPF2Q9HAU5 1272 aaKnown RBP11.36□□□□□ -0.59
NCBP3-204ENST00000574911 AATKQ6ZMQ8 1374 aa11.35□□□□□ -0.59
NCBP3-204ENST00000574911 KNDC1Q76NI1 1749 aa11.35□□□□□ -0.59
NCBP3-204ENST00000574911 CDK12Q9NYV4 1490 aaPredicted RBP11.35□□□□□ -0.59
NCBP3-204ENST00000574911 IL13P35225 146 aa11.35□□□□□ -0.59
NCBP3-204ENST00000574911 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.35□□□□□ -0.59
NCBP3-204ENST00000574911 SIRT1Q96EB6 747 aa11.35□□□□□ -0.59
NCBP3-204ENST00000574911 METP08581 1390 aa11.35□□□□□ -0.59
NCBP3-204ENST00000574911 FRAT2O75474 233 aaPredicted RBP11.35□□□□□ -0.59
NCBP3-204ENST00000574911 PHACTR3Q96KR7 559 aa11.35□□□□□ -0.59
NCBP3-204ENST00000574911 MAP2P11137 1827 aaKnown RBP11.35□□□□□ -0.59
NCBP3-204ENST00000574911 TECPR2O15040 1411 aa11.34□□□□□ -0.59
NCBP3-204ENST00000574911 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
NCBP3-204ENST00000574911 MON2Q7Z3U7 1717 aa11.34□□□□□ -0.59
NCBP3-204ENST00000574911 CALD1Q05682 793 aaKnown RBP11.33□□□□□ -0.6
NCBP3-204ENST00000574911 MLECQ14165 292 aa11.33□□□□□ -0.6
NCBP3-204ENST00000574911 NME9Q86XW9 330 aa11.33□□□□□ -0.6
NCBP3-204ENST00000574911 HMOX1P09601 288 aa11.33□□□□□ -0.6
NCBP3-204ENST00000574911 NUDT16Q96DE0 195 aaKnown RBP11.33□□□□□ -0.6
NCBP3-204ENST00000574911 CPS1P31327 1500 aa11.32□□□□□ -0.6
NCBP3-204ENST00000574911 VAMP4O75379 141 aa11.32□□□□□ -0.6
NCBP3-204ENST00000574911 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
NCBP3-204ENST00000574911 MRPL50Q8N5N7 158 aaKnown RBP11.32□□□□□ -0.6
NCBP3-204ENST00000574911 IFT57Q9NWB7 429 aa11.32□□□□□ -0.6
NCBP3-204ENST00000574911 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
NCBP3-204ENST00000574911 PIK3R4Q99570 1358 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms