RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 NME9Q86XW9 330 aa28.83■■■□□ 2.21
CXCL16-203ENST00000574412 FYB1O15117 783 aa28.83■■■□□ 2.21
CXCL16-203ENST00000574412 ANKRD26Q9UPS8 1709 aa28.82■■■□□ 2.2
CXCL16-203ENST00000574412 NPC1L1Q9UHC9 1359 aa28.82■■■□□ 2.2
CXCL16-203ENST00000574412 PAK3O75914 559 aaPredicted RBP28.82■■■□□ 2.2
CXCL16-203ENST00000574412 SSH2Q76I76 1423 aa28.82■■■□□ 2.2
CXCL16-203ENST00000574412 PARD3Q8TEW0 1356 aa28.81■■■□□ 2.2
CXCL16-203ENST00000574412 ZRANB1Q9UGI0 708 aa28.81■■■□□ 2.2
CXCL16-203ENST00000574412 TNNT2P45379 298 aaPredicted RBP28.78■■■□□ 2.2
CXCL16-203ENST00000574412 PIK3C2AO00443 1686 aa28.78■■■□□ 2.2
CXCL16-203ENST00000574412 ROBO1Q9Y6N7 1651 aa28.78■■■□□ 2.2
CXCL16-203ENST00000574412 KRT28Q7Z3Y7 464 aa28.77■■■□□ 2.2
CXCL16-203ENST00000574412 MORC1Q86VD1 984 aa28.77■■■□□ 2.2
CXCL16-203ENST00000574412 NSD2O96028 1365 aa28.77■■■□□ 2.2
CXCL16-203ENST00000574412 TRPM3Q9HCF6 1732 aaPredicted RBP28.77■■■□□ 2.2
CXCL16-203ENST00000574412 RALBP1Q15311 655 aa28.77■■■□□ 2.2
CXCL16-203ENST00000574412 CERKQ8TCT0 537 aa28.76■■■□□ 2.19
CXCL16-203ENST00000574412 NPHP3Q7Z494 1330 aa28.75■■■□□ 2.19
CXCL16-203ENST00000574412 NUTM2GQ5VZR2 741 aa28.74■■■□□ 2.19
CXCL16-203ENST00000574412 TTC21AQ8NDW8 1320 aa28.74■■■□□ 2.19
CXCL16-203ENST00000574412 UBAP1LF5GYI3 381 aa28.72■■■□□ 2.19
CXCL16-203ENST00000574412 PIP4K2BP78356 416 aa28.72■■■□□ 2.19
CXCL16-203ENST00000574412 NHSL1Q5SYE7 1610 aa28.72■■■□□ 2.19
CXCL16-203ENST00000574412 PXDNQ92626 1479 aa28.71■■■□□ 2.19
CXCL16-203ENST00000574412 MYBBP1AQ9BQG0 1328 aaKnown RBP28.71■■■□□ 2.19
CXCL16-203ENST00000574412 TOM1O60784 492 aa28.71■■■□□ 2.19
CXCL16-203ENST00000574412 ABTB2Q8N961 1025 aa28.71■■■□□ 2.19
CXCL16-203ENST00000574412 SCAF1Q9H7N4 1312 aaKnown RBP28.71■■■□□ 2.19
CXCL16-203ENST00000574412 LMOD2Q6P5Q4 547 aa28.7■■■□□ 2.19
CXCL16-203ENST00000574412 IQSEC2Q5JU85 1478 aa28.7■■■□□ 2.19
CXCL16-203ENST00000574412 COG3Q96JB2 828 aa28.7■■■□□ 2.18
CXCL16-203ENST00000574412 MARF1Q9Y4F3 1742 aaKnown RBP28.69■■■□□ 2.18
CXCL16-203ENST00000574412 CCDC184Q52MB2 194 aa28.69■■■□□ 2.18
CXCL16-203ENST00000574412 BRD4O60885 1362 aaPredicted RBP28.69■■■□□ 2.18
CXCL16-203ENST00000574412 PLEKHG5O94827 1062 aa28.68■■■□□ 2.18
CXCL16-203ENST00000574412 PPP2R1AP30153 589 aa28.67■■■□□ 2.18
CXCL16-203ENST00000574412 NLRP6P59044 892 aa28.67■■■□□ 2.18
CXCL16-203ENST00000574412 OVOS2A0A0J9YW53 1432 aa28.67■■■□□ 2.18
CXCL16-203ENST00000574412 OVOS2Q6IE36 1432 aa28.67■■■□□ 2.18
CXCL16-203ENST00000574412 ALS2Q96Q42 1657 aa28.67■■■□□ 2.18
CXCL16-203ENST00000574412 FBLN1P23142 703 aa28.67■■■□□ 2.18
CXCL16-203ENST00000574412 YTHDC1Q96MU7 727 aaKnown RBP28.67■■■□□ 2.18
CXCL16-203ENST00000574412 SOX12O15370 315 aa28.65■■■□□ 2.18
CXCL16-203ENST00000574412 MAP2P11137 1827 aaKnown RBP28.63■■■□□ 2.17
CXCL16-203ENST00000574412 USP54Q70EL1 1684 aa28.62■■■□□ 2.17
CXCL16-203ENST00000574412 USP31Q70CQ4 1352 aa28.62■■■□□ 2.17
CXCL16-203ENST00000574412 TNS3Q68CZ2 1445 aa28.62■■■□□ 2.17
CXCL16-203ENST00000574412 SOS2Q07890 1332 aaPredicted RBP28.62■■■□□ 2.17
CXCL16-203ENST00000574412 SBNO1A3KN83 1393 aa28.61■■■□□ 2.17
CXCL16-203ENST00000574412 NLRP13Q86W25 1043 aa28.61■■■□□ 2.17
CXCL16-203ENST00000574412 MRS2Q9HD23 443 aa28.61■■■□□ 2.17
CXCL16-203ENST00000574412 SPATA31A3Q5VYP0 1347 aa28.6■■■□□ 2.17
CXCL16-203ENST00000574412 AHDC1Q5TGY3 1603 aaPredicted RBP28.59■■■□□ 2.17
CXCL16-203ENST00000574412 PHLPP1O60346 1717 aa28.58■■■□□ 2.17
CXCL16-203ENST00000574412 MTHFSP49914 203 aa28.55■■■□□ 2.16
CXCL16-203ENST00000574412 RRS1Q15050 365 aaKnown RBP28.55■■■□□ 2.16
CXCL16-203ENST00000574412 PPM1GO15355 546 aaPredicted RBP28.54■■■□□ 2.16
CXCL16-203ENST00000574412 EMILIN1Q9Y6C2 1016 aa28.53■■■□□ 2.16
CXCL16-203ENST00000574412 MED1Q15648 1581 aaPredicted RBP28.52■■■□□ 2.16
CXCL16-203ENST00000574412 ARHGEF10O15013 1369 aa28.52■■■□□ 2.16
CXCL16-203ENST00000574412 CABLES1Q8TDN4 633 aa28.51■■■□□ 2.16
CXCL16-203ENST00000574412 POLKQ9UBT6 870 aa28.51■■■□□ 2.16
CXCL16-203ENST00000574412 PHRF1Q9P1Y6 1649 aaKnown RBP28.51■■■□□ 2.15
CXCL16-203ENST00000574412 AATKQ6ZMQ8 1374 aa28.5■■■□□ 2.15
CXCL16-203ENST00000574412 COL16A1Q07092 1604 aaPredicted RBP28.5■■■□□ 2.15
CXCL16-203ENST00000574412 LTN1O94822 1766 aa28.49■■■□□ 2.15
CXCL16-203ENST00000574412 SLIT3O75094 1523 aa28.49■■■□□ 2.15
CXCL16-203ENST00000574412 CRYBG1Q9Y4K1 1723 aa28.49■■■□□ 2.15
CXCL16-203ENST00000574412 USP19O94966 1318 aa28.49■■■□□ 2.15
CXCL16-203ENST00000574412 NFAT5O94916 1531 aa28.49■■■□□ 2.15
CXCL16-203ENST00000574412 PEAK1Q9H792 1746 aa28.47■■■□□ 2.15
CXCL16-203ENST00000574412 ZBTB7CA1YPR0 619 aa28.46■■■□□ 2.15
CXCL16-203ENST00000574412 GCP02774 474 aa28.46■■■□□ 2.15
CXCL16-203ENST00000574412 MAP3K19Q56UN5 1328 aa28.46■■■□□ 2.15
CXCL16-203ENST00000574412 LRRC59Q96AG4 307 aaKnown RBP28.45■■■□□ 2.15
CXCL16-203ENST00000574412 ABCA3Q99758 1704 aa28.45■■■□□ 2.14
CXCL16-203ENST00000574412 FAM9BQ8IZU0 186 aa28.45■■■□□ 2.14
CXCL16-203ENST00000574412 KCNH5Q8NCM2 988 aa28.45■■■□□ 2.14
CXCL16-203ENST00000574412 SMG6Q86US8 1419 aaKnown RBP28.43■■■□□ 2.14
CXCL16-203ENST00000574412 CENPBP07199 599 aaPredicted RBP28.42■■■□□ 2.14
CXCL16-203ENST00000574412 CFAP53Q96M91 514 aa28.42■■■□□ 2.14
CXCL16-203ENST00000574412 SHPRHQ149N8 1683 aa28.41■■■□□ 2.14
CXCL16-203ENST00000574412 ZC3H6P61129 1189 aaKnown RBP28.41■■■□□ 2.14
CXCL16-203ENST00000574412 CDK12Q9NYV4 1490 aaPredicted RBP28.41■■■□□ 2.14
CXCL16-203ENST00000574412 PNISRQ8TF01 805 aaKnown RBP28.4■■■□□ 2.14
CXCL16-203ENST00000574412 AMPHP49418 695 aa28.39■■■□□ 2.14
CXCL16-203ENST00000574412 COL3A1P02461 1466 aaPredicted RBP28.39■■■□□ 2.14
CXCL16-203ENST00000574412 PNPLA6Q8IY17 1366 aa28.39■■■□□ 2.14
CXCL16-203ENST00000574412 HAP1P54257 671 aaPredicted RBP28.38■■■□□ 2.13
CXCL16-203ENST00000574412 HSP90AB2PQ58FF8 381 aa28.36■■■□□ 2.13
CXCL16-203ENST00000574412 COL22A1Q8NFW1 1626 aaPredicted RBP28.36■■■□□ 2.13
CXCL16-203ENST00000574412 FLT4P35916 1363 aa28.35■■■□□ 2.13
CXCL16-203ENST00000574412 WDR43Q15061 677 aaKnown RBP eCLIP28.34■■■□□ 2.13
CXCL16-203ENST00000574412 ARHGEF25Q86VW2 580 aa28.34■■■□□ 2.13
CXCL16-203ENST00000574412 RGPD5Q99666 1765 aa28.34■■■□□ 2.13
CXCL16-203ENST00000574412 HOXC9P31274 260 aa28.33■■■□□ 2.13
CXCL16-203ENST00000574412 DIAPH1O60610 1272 aaKnown RBP28.32■■■□□ 2.12
CXCL16-203ENST00000574412 KIAA0232Q92628 1395 aa28.32■■■□□ 2.12
CXCL16-203ENST00000574412 HSPA1LP34931 641 aa28.32■■■□□ 2.12
CXCL16-203ENST00000574412 CHRNA2Q15822 529 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms