RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
CDC27-215ENST00000573550 ZNF511Q8NB15 262 aa10.12□□□□□ -0.79
CDC27-215ENST00000573550 MTMR14Q8NCE2 650 aa10.12□□□□□ -0.79
CDC27-215ENST00000573550 GJD4Q96KN9 370 aaPredicted RBP10.12□□□□□ -0.79
CDC27-215ENST00000573550 SNRKQ9NRH2 765 aa10.12□□□□□ -0.79
CDC27-215ENST00000573550 WNT7AO00755 349 aa10.1□□□□□ -0.79
CDC27-215ENST00000573550 PRR20EP86478 221 aa10.1□□□□□ -0.79
CDC27-215ENST00000573550 PRR20CP86479 221 aa10.1□□□□□ -0.79
CDC27-215ENST00000573550 PRR20DP86480 221 aa10.1□□□□□ -0.79
CDC27-215ENST00000573550 PRR20BP86481 221 aa10.1□□□□□ -0.79
CDC27-215ENST00000573550 PRR20AP86496 221 aa10.1□□□□□ -0.79
CDC27-215ENST00000573550 ARMC2Q8NEN0 867 aa10.09□□□□□ -0.79
CDC27-215ENST00000573550 FKBPLQ9UIM3 349 aa10.09□□□□□ -0.79
CDC27-215ENST00000573550 FOXC1Q12948 553 aa10.08□□□□□ -0.8
CDC27-215ENST00000573550 RC3H1Q5TC82 1133 aaKnown RBP10.08□□□□□ -0.8
CDC27-215ENST00000573550 TNFRSF10AO00220 468 aa10.07□□□□□ -0.8
CDC27-215ENST00000573550 NBPF14Q5TI25 921 aa10.07□□□□□ -0.8
CDC27-215ENST00000573550 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
CDC27-215ENST00000573550 MCM6Q14566 821 aa10.06□□□□□ -0.8
CDC27-215ENST00000573550 SH3BP5LQ7L8J4 393 aa10.06□□□□□ -0.8
CDC27-215ENST00000573550 GPKOWQ92917 476 aaPredicted RBP eCLIP10.06□□□□□ -0.8
CDC27-215ENST00000573550 FOXJ1Q92949 421 aa10.06□□□□□ -0.8
CDC27-215ENST00000573550 MRGPRX2Q96LB1 330 aa10.06□□□□□ -0.8
CDC27-215ENST00000573550 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
CDC27-215ENST00000573550 ZC3H4Q9UPT8 1303 aaKnown RBP10.06□□□□□ -0.8
CDC27-215ENST00000573550 GPR37L1O60883 481 aa10.05□□□□□ -0.8
CDC27-215ENST00000573550 C4orf48Q5BLP8 95 aa10.05□□□□□ -0.8
CDC27-215ENST00000573550 SH3RF1Q7Z6J0 888 aa10.05□□□□□ -0.8
CDC27-215ENST00000573550 GFRA3O60609 400 aa10.03□□□□□ -0.8
CDC27-215ENST00000573550 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
CDC27-215ENST00000573550 EHBP1Q8NDI1 1231 aa10.03□□□□□ -0.8
CDC27-215ENST00000573550 TOR4AQ9NXH8 423 aa10.03□□□□□ -0.8
CDC27-215ENST00000573550 NRG2O14511 850 aaPredicted RBP10.02□□□□□ -0.81
CDC27-215ENST00000573550 SIAH2O43255 324 aa10.02□□□□□ -0.81
CDC27-215ENST00000573550 VARSP26640 1264 aaKnown RBP10.02□□□□□ -0.81
CDC27-215ENST00000573550 BPHLQ86WA6 291 aaPredicted RBP10.02□□□□□ -0.81
CDC27-215ENST00000573550 OCSTAMPQ9BR26 566 aa10.02□□□□□ -0.81
CDC27-215ENST00000573550 APBB1O00213 710 aa10.01□□□□□ -0.81
CDC27-215ENST00000573550 PNMA1Q8ND90 353 aa10.01□□□□□ -0.81
CDC27-215ENST00000573550 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
CDC27-215ENST00000573550 NDUFB9Q9Y6M9 179 aa10.01□□□□□ -0.81
CDC27-215ENST00000573550 LAPTM4AQ15012 233 aa10□□□□□ -0.81
CDC27-215ENST00000573550 AGERQ15109 404 aa9.99□□□□□ -0.81
CDC27-215ENST00000573550 SNIP1Q8TAD8 396 aaKnown RBP9.99□□□□□ -0.81
CDC27-215ENST00000573550 GPSM3Q9Y4H4 160 aa9.99□□□□□ -0.81
CDC27-215ENST00000573550 CYP4X1Q8N118 509 aa9.98□□□□□ -0.81
CDC27-215ENST00000573550 ARHGAP9Q9BRR9 750 aa9.98□□□□□ -0.81
CDC27-215ENST00000573550 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
CDC27-215ENST00000573550 TLL2Q9Y6L7 1015 aa9.98□□□□□ -0.81
CDC27-215ENST00000573550 MAGEB6P1A0A0J9YX57 407 aa9.97□□□□□ -0.81
CDC27-215ENST00000573550 FLIIQ13045 1269 aa9.97□□□□□ -0.81
CDC27-215ENST00000573550 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
CDC27-215ENST00000573550 TTC24A2A3L6 582 aaPredicted RBP9.96□□□□□ -0.82
CDC27-215ENST00000573550 PTK2Q05397 1052 aa9.96□□□□□ -0.82
CDC27-215ENST00000573550 ERFEQ4G0M1 354 aa9.96□□□□□ -0.82
CDC27-215ENST00000573550 MPNDQ8N594 471 aa9.96□□□□□ -0.82
CDC27-215ENST00000573550 CARD14Q9BXL6 1004 aa9.96□□□□□ -0.82
CDC27-215ENST00000573550 J3QL48 77 aa9.95□□□□□ -0.82
CDC27-215ENST00000573550 SMPD1P17405 629 aa9.95□□□□□ -0.82
CDC27-215ENST00000573550 TRMT44Q8IYL2 757 aaKnown RBP9.95□□□□□ -0.82
CDC27-215ENST00000573550 ALDH1A1P00352 501 aa9.94□□□□□ -0.82
CDC27-215ENST00000573550 FBXO45P0C2W1 286 aa9.94□□□□□ -0.82
CDC27-215ENST00000573550 ADAM32Q8TC27 787 aa9.94□□□□□ -0.82
CDC27-215ENST00000573550 CDK15Q96Q40 435 aa9.94□□□□□ -0.82
CDC27-215ENST00000573550 GDPD2Q9HCC8 539 aa9.94□□□□□ -0.82
CDC27-215ENST00000573550 FAM187AA6NFU0 413 aa9.93□□□□□ -0.82
CDC27-215ENST00000573550 ZBBXA8MT70 800 aa9.93□□□□□ -0.82
CDC27-215ENST00000573550 IRF5Q13568 498 aa9.93□□□□□ -0.82
CDC27-215ENST00000573550 ZBTB33Q86T24 672 aa9.93□□□□□ -0.82
CDC27-215ENST00000573550 COG6Q9Y2V7 657 aa9.93□□□□□ -0.82
CDC27-215ENST00000573550 PRM3Q9NNZ6 103 aa9.92□□□□□ -0.82
CDC27-215ENST00000573550 MAP4K5Q9Y4K4 846 aa9.92□□□□□ -0.82
CDC27-215ENST00000573550 DGAT1O75907 488 aa9.91□□□□□ -0.82
CDC27-215ENST00000573550 POM121Q96HA1 1249 aa9.91□□□□□ -0.82
CDC27-215ENST00000573550 LCE2BO14633 110 aa9.9□□□□□ -0.82
CDC27-215ENST00000573550 ADH1CP00326 375 aa9.9□□□□□ -0.82
CDC27-215ENST00000573550 PKDCCQ504Y2 493 aa9.9□□□□□ -0.82
CDC27-215ENST00000573550 AVPP01185 164 aa9.89□□□□□ -0.83
CDC27-215ENST00000573550 GRM5P41594 1212 aa9.89□□□□□ -0.83
CDC27-215ENST00000573550 ABL2P42684 1182 aa9.89□□□□□ -0.83
CDC27-215ENST00000573550 NR1H3Q13133 447 aa9.89□□□□□ -0.83
CDC27-215ENST00000573550 ARID5BQ14865 1188 aa9.89□□□□□ -0.83
CDC27-215ENST00000573550 Q6ZNB5 142 aa9.89□□□□□ -0.83
CDC27-215ENST00000573550 SLC10A4Q96EP9 437 aa9.89□□□□□ -0.83
CDC27-215ENST00000573550 UBTFP17480 764 aaKnown RBP9.88□□□□□ -0.83
CDC27-215ENST00000573550 WASF2Q9Y6W5 498 aa9.88□□□□□ -0.83
CDC27-215ENST00000573550 VASH1Q7L8A9 365 aaPredicted RBP9.87□□□□□ -0.83
CDC27-215ENST00000573550 HPS1Q92902 700 aa9.87□□□□□ -0.83
CDC27-215ENST00000573550 CDV3Q9UKY7 258 aaKnown RBP9.87□□□□□ -0.83
CDC27-215ENST00000573550 FSHRP23945 695 aa9.86□□□□□ -0.83
CDC27-215ENST00000573550 NR3C2P08235 984 aa9.85□□□□□ -0.83
CDC27-215ENST00000573550 MYT1Q01538 1121 aa9.85□□□□□ -0.83
CDC27-215ENST00000573550 NR5A1Q13285 461 aa9.85□□□□□ -0.83
CDC27-215ENST00000573550 NNTQ13423 1086 aa9.85□□□□□ -0.83
CDC27-215ENST00000573550 DZIP3Q86Y13 1208 aaKnown RBP9.84□□□□□ -0.83
CDC27-215ENST00000573550 CRIPAKQ8N1N5 446 aa9.84□□□□□ -0.83
CDC27-215ENST00000573550 KCTD15Q96SI1 283 aaPredicted RBP9.84□□□□□ -0.83
CDC27-215ENST00000573550 GTF3C3Q9Y5Q9 886 aa9.84□□□□□ -0.83
CDC27-215ENST00000573550 VAC14Q08AM6 782 aa9.83□□□□□ -0.84
CDC27-215ENST00000573550 NBPF20Q3BBV1 942 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms