RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 MARF1Q9Y4F3 1742 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-211ENST00000573212 TNS3Q68CZ2 1445 aa12.11□□□□□ -0.47
NPLOC4-211ENST00000573212 PRKCSHP14314 528 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-211ENST00000573212 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
NPLOC4-211ENST00000573212 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-211ENST00000573212 DHX57Q6P158 1386 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-211ENST00000573212 FMN2Q9NZ56 1722 aa12.08□□□□□ -0.47
NPLOC4-211ENST00000573212 NRXN1Q9ULB1 1477 aa12.08□□□□□ -0.47
NPLOC4-211ENST00000573212 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
NPLOC4-211ENST00000573212 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
NPLOC4-211ENST00000573212 PRAM1Q96QH2 718 aa12.08□□□□□ -0.48
NPLOC4-211ENST00000573212 KDM2AQ9Y2K7 1162 aa12.08□□□□□ -0.48
NPLOC4-211ENST00000573212 USP32Q8NFA0 1604 aa12.08□□□□□ -0.48
NPLOC4-211ENST00000573212 ARHGEF10O15013 1369 aa12.07□□□□□ -0.48
NPLOC4-211ENST00000573212 KNDC1Q76NI1 1749 aa12.07□□□□□ -0.48
NPLOC4-211ENST00000573212 PMFBP1Q8TBY8 1022 aa12.07□□□□□ -0.48
NPLOC4-211ENST00000573212 CCDC9Q9Y3X0 531 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-211ENST00000573212 KIF1AQ12756 1690 aa12.06□□□□□ -0.48
NPLOC4-211ENST00000573212 HRCP23327 699 aa12.06□□□□□ -0.48
NPLOC4-211ENST00000573212 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
NPLOC4-211ENST00000573212 BAG6P46379 1132 aa12.05□□□□□ -0.48
NPLOC4-211ENST00000573212 SAFB2Q14151 953 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPLOC4-211ENST00000573212 FAM98CQ17RN3 349 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-211ENST00000573212 BTG4Q9NY30 223 aa12.05□□□□□ -0.48
NPLOC4-211ENST00000573212 IFT172Q9UG01 1749 aa12.05□□□□□ -0.48
NPLOC4-211ENST00000573212 ANKARQ7Z5J8 1434 aa12.04□□□□□ -0.48
NPLOC4-211ENST00000573212 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
NPLOC4-211ENST00000573212 POGKQ9P215 609 aa12.04□□□□□ -0.48
NPLOC4-211ENST00000573212 ACIN1Q9UKV3 1341 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-211ENST00000573212 BRWD3Q6RI45 1802 aa12.04□□□□□ -0.48
NPLOC4-211ENST00000573212 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-211ENST00000573212 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-211ENST00000573212 SPATA31A5Q5VU36 1347 aa12.03□□□□□ -0.48
NPLOC4-211ENST00000573212 SPATA31A7Q8IWB4 1347 aa12.03□□□□□ -0.48
NPLOC4-211ENST00000573212 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
NPLOC4-211ENST00000573212 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
NPLOC4-211ENST00000573212 NWD2Q9ULI1 1742 aa12.02□□□□□ -0.49
NPLOC4-211ENST00000573212 DLC1Q96QB1 1528 aa12.01□□□□□ -0.49
NPLOC4-211ENST00000573212 WASLO00401 505 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-211ENST00000573212 FAM182BQ5T319 152 aa12.01□□□□□ -0.49
NPLOC4-211ENST00000573212 HIRIP3Q9BW71 556 aaPredicted RBP12□□□□□ -0.49
NPLOC4-211ENST00000573212 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
NPLOC4-211ENST00000573212 A0A0G2JS52 829 aa11.99□□□□□ -0.49
NPLOC4-211ENST00000573212 MYT1Q01538 1121 aa11.99□□□□□ -0.49
NPLOC4-211ENST00000573212 CAMKK2Q96RR4 588 aa11.99□□□□□ -0.49
NPLOC4-211ENST00000573212 GPRASP1Q5JY77 1395 aa11.99□□□□□ -0.49
NPLOC4-211ENST00000573212 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
NPLOC4-211ENST00000573212 LRP5O75197 1615 aa11.99□□□□□ -0.49
NPLOC4-211ENST00000573212 RGPD8O14715 1765 aaPredicted RBP11.99□□□□□ -0.49
NPLOC4-211ENST00000573212 PLCH1Q4KWH8 1693 aa11.98□□□□□ -0.49
NPLOC4-211ENST00000573212 RGL2O15211 777 aa11.98□□□□□ -0.49
NPLOC4-211ENST00000573212 R3HDM1Q15032 1099 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-211ENST00000573212 EZH2Q15910 746 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-211ENST00000573212 ADGRB1O14514 1584 aa11.97□□□□□ -0.49
NPLOC4-211ENST00000573212 SPATA31A1Q5TZJ5 1347 aa11.97□□□□□ -0.49
NPLOC4-211ENST00000573212 MINK1Q8N4C8 1332 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-211ENST00000573212 NGDNQ8NEJ9 315 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-211ENST00000573212 STAC3Q96MF2 364 aa11.97□□□□□ -0.49
NPLOC4-211ENST00000573212 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-211ENST00000573212 NRAPQ86VF7 1730 aa11.97□□□□□ -0.49
NPLOC4-211ENST00000573212 ADGRB2O60241 1585 aa11.96□□□□□ -0.49
NPLOC4-211ENST00000573212 FAM196AQ6ZSG2 479 aa11.96□□□□□ -0.49
NPLOC4-211ENST00000573212 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
NPLOC4-211ENST00000573212 PRDM11Q9NQV5 511 aa11.96□□□□□ -0.49
NPLOC4-211ENST00000573212 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.49
NPLOC4-211ENST00000573212 ABCA3Q99758 1704 aa11.96□□□□□ -0.49
NPLOC4-211ENST00000573212 TRPM3Q9HCF6 1732 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-211ENST00000573212 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-211ENST00000573212 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-211ENST00000573212 NUDT16Q96DE0 195 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-211ENST00000573212 COL14A1Q05707 1796 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-211ENST00000573212 ALS2Q96Q42 1657 aa11.94□□□□□ -0.5
NPLOC4-211ENST00000573212 TRIM37O94972 964 aa11.94□□□□□ -0.5
NPLOC4-211ENST00000573212 CHRNA2Q15822 529 aa11.94□□□□□ -0.5
NPLOC4-211ENST00000573212 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
NPLOC4-211ENST00000573212 TULP4Q9NRJ4 1543 aa11.94□□□□□ -0.5
NPLOC4-211ENST00000573212 KIAA0232Q92628 1395 aa11.93□□□□□ -0.5
NPLOC4-211ENST00000573212 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
NPLOC4-211ENST00000573212 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
NPLOC4-211ENST00000573212 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
NPLOC4-211ENST00000573212 BARGINQ6ZT62 677 aa11.93□□□□□ -0.5
NPLOC4-211ENST00000573212 DCAF11Q8TEB1 546 aa11.93□□□□□ -0.5
NPLOC4-211ENST00000573212 THSD7AQ9UPZ6 1657 aa11.93□□□□□ -0.5
NPLOC4-211ENST00000573212 PLEKHG3A1L390 1219 aa11.92□□□□□ -0.5
NPLOC4-211ENST00000573212 APBA3O96018 575 aa11.92□□□□□ -0.5
NPLOC4-211ENST00000573212 ZC3H6P61129 1189 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-211ENST00000573212 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
NPLOC4-211ENST00000573212 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-211ENST00000573212 SPRYD3Q8NCJ5 442 aa11.91□□□□□ -0.5
NPLOC4-211ENST00000573212 CDK19Q9BWU1 502 aa11.91□□□□□ -0.5
NPLOC4-211ENST00000573212 PARD3Q8TEW0 1356 aa11.91□□□□□ -0.5
NPLOC4-211ENST00000573212 ACEP12821 1306 aa11.9□□□□□ -0.5
NPLOC4-211ENST00000573212 TPRNQ4KMQ1 711 aa11.9□□□□□ -0.5
NPLOC4-211ENST00000573212 STRN4Q9NRL3 753 aa11.9□□□□□ -0.5
NPLOC4-211ENST00000573212 CCDC61Q9Y6R9 512 aa11.9□□□□□ -0.5
NPLOC4-211ENST00000573212 POLR3AO14802 1390 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-211ENST00000573212 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
NPLOC4-211ENST00000573212 CRYBG1Q9Y4K1 1723 aa11.89□□□□□ -0.51
NPLOC4-211ENST00000573212 EVA1CP58658 441 aa11.89□□□□□ -0.51
NPLOC4-211ENST00000573212 PDE3BQ13370 1112 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms