RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 NSD3Q9BZ95 1437 aa13.41□□□□□ -0.26
TOM1L1-210ENST00000572158 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
TOM1L1-210ENST00000572158 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
TOM1L1-210ENST00000572158 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
TOM1L1-210ENST00000572158 NRKQ7Z2Y5 1582 aa13.4□□□□□ -0.26
TOM1L1-210ENST00000572158 KIF1AQ12756 1690 aa13.4□□□□□ -0.26
TOM1L1-210ENST00000572158 XPCQ01831 940 aaPredicted RBP13.39□□□□□ -0.27
TOM1L1-210ENST00000572158 DIEXFQ68CQ4 756 aaKnown RBP13.39□□□□□ -0.27
TOM1L1-210ENST00000572158 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
TOM1L1-210ENST00000572158 ROBO1Q9Y6N7 1651 aa13.38□□□□□ -0.27
TOM1L1-210ENST00000572158 EDC4Q6P2E9 1401 aaKnown RBP13.38□□□□□ -0.27
TOM1L1-210ENST00000572158 UBAP1LF5GYI3 381 aa13.38□□□□□ -0.27
TOM1L1-210ENST00000572158 KNSTRNQ9Y448 316 aa13.38□□□□□ -0.27
TOM1L1-210ENST00000572158 TTC21BQ7Z4L5 1316 aa13.37□□□□□ -0.27
TOM1L1-210ENST00000572158 PXDNQ92626 1479 aa13.37□□□□□ -0.27
TOM1L1-210ENST00000572158 FYB1O15117 783 aa13.37□□□□□ -0.27
TOM1L1-210ENST00000572158 TOM1O60784 492 aa13.37□□□□□ -0.27
TOM1L1-210ENST00000572158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■□□□ 13.3
TOM1L1-210ENST00000572158 TRPM3Q9HCF6 1732 aaPredicted RBP13.37□□□□□ -0.27
TOM1L1-210ENST00000572158 PSME1Q06323 249 aa13.36□□□□□ -0.27
TOM1L1-210ENST00000572158 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
TOM1L1-210ENST00000572158 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
TOM1L1-210ENST00000572158 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
TOM1L1-210ENST00000572158 NME9Q86XW9 330 aa13.35□□□□□ -0.27
TOM1L1-210ENST00000572158 SOS2Q07890 1332 aaPredicted RBP13.35□□□□□ -0.27
TOM1L1-210ENST00000572158 PIP4K2BP78356 416 aa13.34□□□□□ -0.27
TOM1L1-210ENST00000572158 CNGB1Q14028 1251 aaPredicted RBP13.34□□□□□ -0.27
TOM1L1-210ENST00000572158 CC2D1BQ5T0F9 858 aaKnown RBP13.34□□□□□ -0.27
TOM1L1-210ENST00000572158 NPC1L1Q9UHC9 1359 aa13.34□□□□□ -0.27
TOM1L1-210ENST00000572158 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
TOM1L1-210ENST00000572158 NPHP3Q7Z494 1330 aa13.34□□□□□ -0.27
TOM1L1-210ENST00000572158 GGNBP2Q9H3C7 697 aa13.34□□□□□ -0.27
TOM1L1-210ENST00000572158 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
TOM1L1-210ENST00000572158 KIF20BQ96Q89 1820 aa13.32□□□□□ -0.28
TOM1L1-210ENST00000572158 MARF1Q9Y4F3 1742 aaKnown RBP13.32□□□□□ -0.28
TOM1L1-210ENST00000572158 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
TOM1L1-210ENST00000572158 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
TOM1L1-210ENST00000572158 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
TOM1L1-210ENST00000572158 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
TOM1L1-210ENST00000572158 PRKRIP1Q9H875 184 aaPredicted RBP13.32□□□□□ -0.28
TOM1L1-210ENST00000572158 TTC21AQ8NDW8 1320 aa13.31□□□□□ -0.28
TOM1L1-210ENST00000572158 SBNO1A3KN83 1393 aa13.31□□□□□ -0.28
TOM1L1-210ENST00000572158 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
TOM1L1-210ENST00000572158 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
TOM1L1-210ENST00000572158 NUTM2GQ5VZR2 741 aa13.31□□□□□ -0.28
TOM1L1-210ENST00000572158 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
TOM1L1-210ENST00000572158 SPATA31A3Q5VYP0 1347 aa13.31□□□□□ -0.28
TOM1L1-210ENST00000572158 USP31Q70CQ4 1352 aa13.3□□□□□ -0.28
TOM1L1-210ENST00000572158 OVOS2A0A0J9YW53 1432 aa13.3□□□□□ -0.28
TOM1L1-210ENST00000572158 OVOS2Q6IE36 1432 aa13.3□□□□□ -0.28
TOM1L1-210ENST00000572158 FBLN1P23142 703 aa13.29□□□□□ -0.28
TOM1L1-210ENST00000572158 MIER1Q8N108 512 aa13.29□□□□□ -0.28
TOM1L1-210ENST00000572158 ABTB2Q8N961 1025 aa13.29□□□□□ -0.28
TOM1L1-210ENST00000572158 ANKRD26Q9UPS8 1709 aa13.29□□□□□ -0.28
TOM1L1-210ENST00000572158 USP54Q70EL1 1684 aa13.29□□□□□ -0.28
TOM1L1-210ENST00000572158 NSD2O96028 1365 aa13.29□□□□□ -0.28
TOM1L1-210ENST00000572158 TNS3Q68CZ2 1445 aa13.29□□□□□ -0.28
TOM1L1-210ENST00000572158 COL16A1Q07092 1604 aaPredicted RBP13.28□□□□□ -0.28
TOM1L1-210ENST00000572158 NLRP6P59044 892 aa13.28□□□□□ -0.28
TOM1L1-210ENST00000572158 MED1Q15648 1581 aaPredicted RBP13.27□□□□□ -0.28
TOM1L1-210ENST00000572158 ANP32CO43423 234 aa13.27□□□□□ -0.29
TOM1L1-210ENST00000572158 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
TOM1L1-210ENST00000572158 PHLPP1O60346 1717 aa13.27□□□□□ -0.29
TOM1L1-210ENST00000572158 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
TOM1L1-210ENST00000572158 RALBP1Q15311 655 aa13.26□□□□□ -0.29
TOM1L1-210ENST00000572158 LMOD2Q6P5Q4 547 aa13.26□□□□□ -0.29
TOM1L1-210ENST00000572158 COG3Q96JB2 828 aa13.25□□□□□ -0.29
TOM1L1-210ENST00000572158 USP19O94966 1318 aa13.25□□□□□ -0.29
TOM1L1-210ENST00000572158 CRYBG1Q9Y4K1 1723 aa13.25□□□□□ -0.29
TOM1L1-210ENST00000572158 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
TOM1L1-210ENST00000572158 CCDC184Q52MB2 194 aa13.24□□□□□ -0.29
TOM1L1-210ENST00000572158 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
TOM1L1-210ENST00000572158 LRRC59Q96AG4 307 aaKnown RBP13.24□□□□□ -0.29
TOM1L1-210ENST00000572158 SLIT3O75094 1523 aa13.24□□□□□ -0.29
TOM1L1-210ENST00000572158 NLRP13Q86W25 1043 aa13.23□□□□□ -0.29
TOM1L1-210ENST00000572158 ARHGEF10O15013 1369 aa13.23□□□□□ -0.29
TOM1L1-210ENST00000572158 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
TOM1L1-210ENST00000572158 HSPA1LP34931 641 aa13.23□□□□□ -0.29
TOM1L1-210ENST00000572158 PNPLA6Q8IY17 1366 aa13.23□□□□□ -0.29
TOM1L1-210ENST00000572158 NFAT5O94916 1531 aa13.23□□□□□ -0.29
TOM1L1-210ENST00000572158 GCP02774 474 aa13.22□□□□□ -0.29
TOM1L1-210ENST00000572158 AATKQ6ZMQ8 1374 aa13.22□□□□□ -0.29
TOM1L1-210ENST00000572158 MYBBP1AQ9BQG0 1328 aaKnown RBP13.22□□□□□ -0.29
TOM1L1-210ENST00000572158 POLKQ9UBT6 870 aa13.22□□□□□ -0.29
TOM1L1-210ENST00000572158 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.29
TOM1L1-210ENST00000572158 SOX12O15370 315 aa13.21□□□□□ -0.29
TOM1L1-210ENST00000572158 RRS1Q15050 365 aaKnown RBP13.21□□□□□ -0.29
TOM1L1-210ENST00000572158 MAP2P11137 1827 aaKnown RBP13.21□□□□□ -0.3
TOM1L1-210ENST00000572158 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.3
TOM1L1-210ENST00000572158 EMILIN1Q9Y6C2 1016 aa13.2□□□□□ -0.3
TOM1L1-210ENST00000572158 ABCA3Q99758 1704 aa13.2□□□□□ -0.3
TOM1L1-210ENST00000572158 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
TOM1L1-210ENST00000572158 MTHFSP49914 203 aa13.19□□□□□ -0.3
TOM1L1-210ENST00000572158 MAP3K19Q56UN5 1328 aa13.19□□□□□ -0.3
TOM1L1-210ENST00000572158 SMG6Q86US8 1419 aaKnown RBP13.18□□□□□ -0.3
TOM1L1-210ENST00000572158 ARHGEF25Q86VW2 580 aa13.18□□□□□ -0.3
TOM1L1-210ENST00000572158 KCNH5Q8NCM2 988 aa13.18□□□□□ -0.3
TOM1L1-210ENST00000572158 ZC3H6P61129 1189 aaKnown RBP13.17□□□□□ -0.3
TOM1L1-210ENST00000572158 SHPRHQ149N8 1683 aa13.17□□□□□ -0.3
TOM1L1-210ENST00000572158 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms