RNA–Protein interactions for RNA: ENST00000571489.5

PCTP-204, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 1 (best)

Gene PCTP, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-204ENST00000571489 ZCCHC11Q5TAX3 1644 aaKnown RBP9.43□□□□□ -0.9
PCTP-204ENST00000571489 HMOX1P09601 288 aa9.43□□□□□ -0.9
PCTP-204ENST00000571489 MYO5CQ9NQX4 1742 aa9.43□□□□□ -0.9
PCTP-204ENST00000571489 TRIM27P14373 513 aa9.43□□□□□ -0.9
PCTP-204ENST00000571489 HDAC1Q13547 482 aaPredicted RBP9.43□□□□□ -0.9
PCTP-204ENST00000571489 CLASP1Q7Z460 1538 aa9.43□□□□□ -0.9
PCTP-204ENST00000571489 SYNMO15061 1565 aa9.42□□□□□ -0.9
PCTP-204ENST00000571489 SOX12O15370 315 aa9.42□□□□□ -0.9
PCTP-204ENST00000571489 ANKRD36BQ8N2N9 1353 aa9.42□□□□□ -0.9
PCTP-204ENST00000571489 RABEP1Q15276 862 aa9.41□□□□□ -0.9
PCTP-204ENST00000571489 SLC4A10Q6U841 1118 aa9.41□□□□□ -0.9
PCTP-204ENST00000571489 CHMP4AQ9BY43 222 aa9.41□□□□□ -0.9
PCTP-204ENST00000571489 SHROOM2Q13796 1616 aa9.41□□□□□ -0.9
PCTP-204ENST00000571489 TWISTNBQ3B726 338 aaPredicted RBP9.41□□□□□ -0.9
PCTP-204ENST00000571489 NCBP3Q53F19 620 aaKnown RBP9.41□□□□□ -0.9
PCTP-204ENST00000571489 C14orf37Q86TY3 774 aa9.41□□□□□ -0.9
PCTP-204ENST00000571489 OS9Q13438 667 aaPredicted RBP9.41□□□□□ -0.9
PCTP-204ENST00000571489 K7ELQ4 463 aaPredicted RBP9.4□□□□□ -0.9
PCTP-204ENST00000571489 RLBP1P12271 317 aa9.4□□□□□ -0.9
PCTP-204ENST00000571489 HSP90AA2PQ14568 343 aaPredicted RBP9.4□□□□□ -0.9
PCTP-204ENST00000571489 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.9
PCTP-204ENST00000571489 SBNO2Q9Y2G9 1366 aa9.4□□□□□ -0.9
PCTP-204ENST00000571489 NFE2L2Q16236 605 aa9.4□□□□□ -0.9
PCTP-204ENST00000571489 KIAA1211Q6ZU35 1233 aa9.4□□□□□ -0.9
PCTP-204ENST00000571489 CDK19Q9BWU1 502 aa9.4□□□□□ -0.9
PCTP-204ENST00000571489 IQGAP3Q86VI3 1631 aa9.4□□□□□ -0.9
PCTP-204ENST00000571489 KDM5AP29375 1690 aaKnown RBP9.4□□□□□ -0.9
PCTP-204ENST00000571489 ZMYM3Q14202 1370 aa9.4□□□□□ -0.9
PCTP-204ENST00000571489 CABP1Q9NZU7 370 aa9.4□□□□□ -0.91
PCTP-204ENST00000571489 UNC13BO14795 1591 aa9.4□□□□□ -0.91
PCTP-204ENST00000571489 TRIM6-TRIM34B2RNG4 842 aa9.39□□□□□ -0.91
PCTP-204ENST00000571489 DMRT2Q9Y5R5 561 aa9.39□□□□□ -0.91
PCTP-204ENST00000571489 SEC24BO95487 1268 aa9.39□□□□□ -0.91
PCTP-204ENST00000571489 PLXNC1O60486 1568 aa9.39□□□□□ -0.91
PCTP-204ENST00000571489 PHF14O94880 888 aa9.39□□□□□ -0.91
PCTP-204ENST00000571489 C1orf115Q9H7X2 142 aa9.39□□□□□ -0.91
PCTP-204ENST00000571489 LAMC1P11047 1609 aa9.39□□□□□ -0.91
PCTP-204ENST00000571489 TRPM2O94759 1503 aa9.39□□□□□ -0.91
PCTP-204ENST00000571489 TRHP20396 242 aaPredicted RBP9.38□□□□□ -0.91
PCTP-204ENST00000571489 BMP2KLQ5H9B9 411 aa9.38□□□□□ -0.91
PCTP-204ENST00000571489 NASPP49321 788 aaPredicted RBP9.38□□□□□ -0.91
PCTP-204ENST00000571489 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.38□□□□□ -0.91
PCTP-204ENST00000571489 KCNJ4P48050 445 aa9.38□□□□□ -0.91
PCTP-204ENST00000571489 TNNQ9UQP3 1299 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 CDC42BPBQ9Y5S2 1711 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 PTPRTO14522 1441 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 KIAA2012Q0VF49 1180 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 MCTP1Q6DN14 999 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 ATP7AQ04656 1500 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 PLCB2Q00722 1185 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 SMC5Q8IY18 1101 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 CCDC173Q0VFZ6 552 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 TPRNQ4KMQ1 711 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 CWC22Q9HCG8 908 aaKnown RBP9.37□□□□□ -0.91
PCTP-204ENST00000571489 IFT57Q9NWB7 429 aa9.37□□□□□ -0.91
PCTP-204ENST00000571489 AMPHP49418 695 aa9.36□□□□□ -0.91
PCTP-204ENST00000571489 ZNF518AQ6AHZ1 1483 aa9.36□□□□□ -0.91
PCTP-204ENST00000571489 ZBTB7CA1YPR0 619 aa9.36□□□□□ -0.91
PCTP-204ENST00000571489 ESPNB1AK53 854 aa9.36□□□□□ -0.91
PCTP-204ENST00000571489 NUCB1Q02818 461 aa9.36□□□□□ -0.91
PCTP-204ENST00000571489 HDAC5Q9UQL6 1122 aa9.36□□□□□ -0.91
PCTP-204ENST00000571489 ABCC1P33527 1531 aa9.36□□□□□ -0.91
PCTP-204ENST00000571489 ERVK-7P63135 1459 aa9.35□□□□□ -0.91
PCTP-204ENST00000571489 MCM2P49736 904 aa9.35□□□□□ -0.91
PCTP-204ENST00000571489 IDI1Q13907 227 aa9.35□□□□□ -0.91
PCTP-204ENST00000571489 CSPP1Q1MSJ5 1256 aa9.35□□□□□ -0.91
PCTP-204ENST00000571489 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.35□□□□□ -0.91
PCTP-204ENST00000571489 RPAP2Q8IXW5 612 aaPredicted RBP9.35□□□□□ -0.91
PCTP-204ENST00000571489 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
PCTP-204ENST00000571489 SNX21Q969T3 373 aa9.35□□□□□ -0.91
PCTP-204ENST00000571489 RILPL2Q969X0 211 aa9.35□□□□□ -0.91
PCTP-204ENST00000571489 MYOM2P54296 1465 aa9.35□□□□□ -0.91
PCTP-204ENST00000571489 GOLGA6L4A6NEF3 574 aa9.35□□□□□ -0.91
PCTP-204ENST00000571489 CHAF1AQ13111 956 aaPredicted RBP9.34□□□□□ -0.91
PCTP-204ENST00000571489 FOXD4L5Q5VV16 416 aaPredicted RBP9.34□□□□□ -0.91
PCTP-204ENST00000571489 NOL8Q76FK4 1167 aaKnown RBP9.34□□□□□ -0.91
PCTP-204ENST00000571489 NGDNQ8NEJ9 315 aaKnown RBP9.34□□□□□ -0.91
PCTP-204ENST00000571489 FOXD4L4Q8WXT5 416 aaPredicted RBP9.34□□□□□ -0.91
PCTP-204ENST00000571489 TNPO1Q92973 898 aaKnown RBP9.34□□□□□ -0.91
PCTP-204ENST00000571489 FYB1O15117 783 aa9.34□□□□□ -0.91
PCTP-204ENST00000571489 MBD3O95983 291 aa9.34□□□□□ -0.91
PCTP-204ENST00000571489 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
PCTP-204ENST00000571489 ZBTB40Q9NUA8 1239 aa9.34□□□□□ -0.91
PCTP-204ENST00000571489 CAVIN1Q6NZI2 390 aaKnown RBP9.33□□□□□ -0.92
PCTP-204ENST00000571489 ANO2Q9NQ90 1003 aa9.33□□□□□ -0.92
PCTP-204ENST00000571489 TSPYL4Q9UJ04 414 aa9.33□□□□□ -0.92
PCTP-204ENST00000571489 ATP6V1DQ9Y5K8 247 aa9.33□□□□□ -0.92
PCTP-204ENST00000571489 XRCC6P12956 609 aaKnown RBP eCLIP9.33□□□□□ -0.92
PCTP-204ENST00000571489 GPATCH3Q96I76 525 aa9.33□□□□□ -0.92
PCTP-204ENST00000571489 THUMPD2Q9BTF0 503 aaKnown RBP9.33□□□□□ -0.92
PCTP-204ENST00000571489 ERC2O15083 957 aa9.33□□□□□ -0.92
PCTP-204ENST00000571489 TPM2P07951 284 aa9.33□□□□□ -0.92
PCTP-204ENST00000571489 GNAI3P08754 354 aa9.33□□□□□ -0.92
PCTP-204ENST00000571489 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
PCTP-204ENST00000571489 TBC1D9Q6ZT07 1266 aa9.32□□□□□ -0.92
PCTP-204ENST00000571489 E9PCH4 1651 aa9.32□□□□□ -0.92
PCTP-204ENST00000571489 NUTM2FA1L443 756 aa9.32□□□□□ -0.92
PCTP-204ENST00000571489 EID1Q9Y6B2 187 aa9.32□□□□□ -0.92
PCTP-204ENST00000571489 CCT4P50991 539 aaKnown RBP9.31□□□□□ -0.92
PCTP-204ENST00000571489 SULT6B1Q6IMI4 303 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms