RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 FBXO31Q5XUX0 539 aaPredicted RBP13.19□□□□□ -0.3
CDC27-212ENST00000570818 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
CDC27-212ENST00000570818 BAP1Q92560 729 aa13.19□□□□□ -0.3
CDC27-212ENST00000570818 LINC01559Q495D7 138 aa13.18□□□□□ -0.3
CDC27-212ENST00000570818 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
CDC27-212ENST00000570818 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
CDC27-212ENST00000570818 TRIM67Q6ZTA4 783 aa13.18□□□□□ -0.3
CDC27-212ENST00000570818 CYP4X1Q8N118 509 aa13.18□□□□□ -0.3
CDC27-212ENST00000570818 PKD2L1Q9P0L9 805 aa13.18□□□□□ -0.3
CDC27-212ENST00000570818 ZNF511Q8NB15 262 aa13.17□□□□□ -0.3
CDC27-212ENST00000570818 EHBP1Q8NDI1 1231 aa13.17□□□□□ -0.3
CDC27-212ENST00000570818 LRRN4Q8WUT4 740 aa13.17□□□□□ -0.3
CDC27-212ENST00000570818 SH3BP2P78314 561 aa13.15□□□□□ -0.3
CDC27-212ENST00000570818 SKOR1P84550 965 aa13.15□□□□□ -0.3
CDC27-212ENST00000570818 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.3
CDC27-212ENST00000570818 TTC24A2A3L6 582 aaPredicted RBP13.14□□□□□ -0.31
CDC27-212ENST00000570818 Q6ZNB5 142 aa13.14□□□□□ -0.31
CDC27-212ENST00000570818 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
CDC27-212ENST00000570818 MRGPRX2Q96LB1 330 aa13.14□□□□□ -0.31
CDC27-212ENST00000570818 AGERQ15109 404 aa13.13□□□□□ -0.31
CDC27-212ENST00000570818 APBB1O00213 710 aa13.12□□□□□ -0.31
CDC27-212ENST00000570818 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
CDC27-212ENST00000570818 BPHLQ86WA6 291 aaPredicted RBP13.12□□□□□ -0.31
CDC27-212ENST00000570818 SNIP1Q8TAD8 396 aaKnown RBP13.12□□□□□ -0.31
CDC27-212ENST00000570818 VARSP26640 1264 aaKnown RBP13.11□□□□□ -0.31
CDC27-212ENST00000570818 ZC3H4Q9UPT8 1303 aaKnown RBP13.11□□□□□ -0.31
CDC27-212ENST00000570818 NR6A1Q15406 480 aa13.1□□□□□ -0.31
CDC27-212ENST00000570818 FKBPLQ9UIM3 349 aa13.1□□□□□ -0.31
CDC27-212ENST00000570818 FAM187AA6NFU0 413 aa13.09□□□□□ -0.31
CDC27-212ENST00000570818 DGAT1O75907 488 aa13.09□□□□□ -0.31
CDC27-212ENST00000570818 TMEM132AQ24JP5 1023 aa13.09□□□□□ -0.31
CDC27-212ENST00000570818 TOR4AQ9NXH8 423 aa13.09□□□□□ -0.31
CDC27-212ENST00000570818 FAM174AQ8TBP5 190 aa13.08□□□□□ -0.32
CDC27-212ENST00000570818 SOCS7O14512 581 aa13.06□□□□□ -0.32
CDC27-212ENST00000570818 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
CDC27-212ENST00000570818 PDXDC2PQ6P474 469 aa13.05□□□□□ -0.32
CDC27-212ENST00000570818 FOXJ1Q92949 421 aa13.05□□□□□ -0.32
CDC27-212ENST00000570818 ALDH1A1P00352 501 aa13.03□□□□□ -0.32
CDC27-212ENST00000570818 PRM3Q9NNZ6 103 aa13.03□□□□□ -0.32
CDC27-212ENST00000570818 MAGEB6P1A0A0J9YX57 407 aa13.02□□□□□ -0.33
CDC27-212ENST00000570818 PTK2Q05397 1052 aa13.02□□□□□ -0.33
CDC27-212ENST00000570818 MPNDQ8N594 471 aa13.02□□□□□ -0.33
CDC27-212ENST00000570818 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
CDC27-212ENST00000570818 SIAH2O43255 324 aa13.01□□□□□ -0.33
CDC27-212ENST00000570818 SH3BP5LQ7L8J4 393 aa13.01□□□□□ -0.33
CDC27-212ENST00000570818 ARHGAP9Q9BRR9 750 aa13.01□□□□□ -0.33
CDC27-212ENST00000570818 GPSM3Q9Y4H4 160 aa13.01□□□□□ -0.33
CDC27-212ENST00000570818 TRAF7Q6Q0C0 670 aa13□□□□□ -0.33
CDC27-212ENST00000570818 SH3RF1Q7Z6J0 888 aa13□□□□□ -0.33
CDC27-212ENST00000570818 EPS8L1Q8TE68 723 aa13□□□□□ -0.33
CDC27-212ENST00000570818 ZBTB33Q86T24 672 aa12.99□□□□□ -0.33
CDC27-212ENST00000570818 TRIM34Q9BYJ4 488 aa12.99□□□□□ -0.33
CDC27-212ENST00000570818 J3QL48 77 aa12.98□□□□□ -0.33
CDC27-212ENST00000570818 CARD14Q9BXL6 1004 aa12.98□□□□□ -0.33
CDC27-212ENST00000570818 SMPD1P17405 629 aa12.97□□□□□ -0.33
CDC27-212ENST00000570818 ARID5BQ14865 1188 aa12.97□□□□□ -0.33
CDC27-212ENST00000570818 MTMR14Q8NCE2 650 aa12.97□□□□□ -0.33
CDC27-212ENST00000570818 NDUFB9Q9Y6M9 179 aa12.97□□□□□ -0.33
CDC27-212ENST00000570818 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.33
CDC27-212ENST00000570818 SNRKQ9NRH2 765 aa12.96□□□□□ -0.33
CDC27-212ENST00000570818 TLL2Q9Y6L7 1015 aa12.96□□□□□ -0.33
CDC27-212ENST00000570818 CTC1Q2NKJ3 1217 aa12.95□□□□□ -0.34
CDC27-212ENST00000570818 C4orf48Q5BLP8 95 aa12.95□□□□□ -0.34
CDC27-212ENST00000570818 C1QTNF2Q9BXJ5 285 aa12.95□□□□□ -0.34
CDC27-212ENST00000570818 AVPP01185 164 aa12.94□□□□□ -0.34
CDC27-212ENST00000570818 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
CDC27-212ENST00000570818 CDK15Q96Q40 435 aa12.94□□□□□ -0.34
CDC27-212ENST00000570818 CDV3Q9UKY7 258 aaKnown RBP12.94□□□□□ -0.34
CDC27-212ENST00000570818 MYT1Q01538 1121 aa12.93□□□□□ -0.34
CDC27-212ENST00000570818 SLC10A4Q96EP9 437 aa12.93□□□□□ -0.34
CDC27-212ENST00000570818 ADH1CP00326 375 aa12.92□□□□□ -0.34
CDC27-212ENST00000570818 ERFEQ4G0M1 354 aa12.92□□□□□ -0.34
CDC27-212ENST00000570818 MAP4K5Q9Y4K4 846 aa12.92□□□□□ -0.34
CDC27-212ENST00000570818 AXIN1O15169 862 aa12.91□□□□□ -0.34
CDC27-212ENST00000570818 VASH1Q7L8A9 365 aaPredicted RBP12.91□□□□□ -0.34
CDC27-212ENST00000570818 NR5A1Q13285 461 aa12.9□□□□□ -0.34
CDC27-212ENST00000570818 CRIPAKQ8N1N5 446 aa12.9□□□□□ -0.34
CDC27-212ENST00000570818 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
CDC27-212ENST00000570818 ZBBXA8MT70 800 aa12.89□□□□□ -0.35
CDC27-212ENST00000570818 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
CDC27-212ENST00000570818 HPS1Q92902 700 aa12.89□□□□□ -0.35
CDC27-212ENST00000570818 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
CDC27-212ENST00000570818 SMCPP49901 116 aaPredicted RBP12.88□□□□□ -0.35
CDC27-212ENST00000570818 FLIIQ13045 1269 aa12.88□□□□□ -0.35
CDC27-212ENST00000570818 NNTQ13423 1086 aa12.88□□□□□ -0.35
CDC27-212ENST00000570818 DZIP3Q86Y13 1208 aaKnown RBP12.87□□□□□ -0.35
CDC27-212ENST00000570818 MCM6Q14566 821 aa12.86□□□□□ -0.35
CDC27-212ENST00000570818 NBPF20Q3BBV1 942 aa12.86□□□□□ -0.35
CDC27-212ENST00000570818 AAASQ9NRG9 546 aa12.85□□□□□ -0.35
CDC27-212ENST00000570818 FSHRP23945 695 aa12.84□□□□□ -0.35
CDC27-212ENST00000570818 NR1H3Q13133 447 aa12.83□□□□□ -0.36
CDC27-212ENST00000570818 OCSTAMPQ9BR26 566 aa12.83□□□□□ -0.36
CDC27-212ENST00000570818 TBC1D2BQ9UPU7 963 aa12.83□□□□□ -0.36
CDC27-212ENST00000570818 ST8SIA5O15466 376 aa12.82□□□□□ -0.36
CDC27-212ENST00000570818 FBXO45P0C2W1 286 aa12.82□□□□□ -0.36
CDC27-212ENST00000570818 GRM5P41594 1212 aa12.82□□□□□ -0.36
CDC27-212ENST00000570818 MCCD1P59942 119 aaPredicted RBP12.82□□□□□ -0.36
CDC27-212ENST00000570818 CAPN5O15484 640 aaPredicted RBP12.81□□□□□ -0.36
CDC27-212ENST00000570818 KCTD15Q96SI1 283 aaPredicted RBP12.81□□□□□ -0.36
CDC27-212ENST00000570818 LCE2BO14633 110 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms