RNA–Protein interactions for RNA: ENST00000569930.1

TSC2-226, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 2,621 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-226ENST00000569930 MYH16Q9H6N6 1097 aa23.49■■□□□ 1.35
TSC2-226ENST00000569930 GLIPR1L2Q4G1C9 344 aa23.49■■□□□ 1.35
TSC2-226ENST00000569930 NUTM2DQ5VT03 806 aaPredicted RBP23.49■■□□□ 1.35
TSC2-226ENST00000569930 MYOM2P54296 1465 aa23.49■■□□□ 1.35
TSC2-226ENST00000569930 HSCBQ8IWL3 235 aa23.48■■□□□ 1.35
TSC2-226ENST00000569930 SPATA31D1Q6ZQQ2 1576 aa23.48■■□□□ 1.35
TSC2-226ENST00000569930 ERBB4Q15303 1308 aa23.48■■□□□ 1.35
TSC2-226ENST00000569930 DDX11L8A8MPP1 907 aa23.47■■□□□ 1.35
TSC2-226ENST00000569930 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
TSC2-226ENST00000569930 HSP90AA2PQ14568 343 aaPredicted RBP23.47■■□□□ 1.35
TSC2-226ENST00000569930 NSD3Q9BZ95 1437 aa23.47■■□□□ 1.35
TSC2-226ENST00000569930 ZKSCAN2Q63HK3 967 aa23.47■■□□□ 1.35
TSC2-226ENST00000569930 FTSJ3Q8IY81 847 aaKnown RBP23.47■■□□□ 1.35
TSC2-226ENST00000569930 CEBPAP49715 358 aaPredicted RBP23.46■■□□□ 1.35
TSC2-226ENST00000569930 DZIP1LQ8IYY4 767 aaKnown RBP23.46■■□□□ 1.35
TSC2-226ENST00000569930 ESPNB1AK53 854 aa23.46■■□□□ 1.35
TSC2-226ENST00000569930 SLC24A1O60721 1099 aa23.46■■□□□ 1.35
TSC2-226ENST00000569930 PLPPR3Q6T4P5 718 aa23.46■■□□□ 1.35
TSC2-226ENST00000569930 KIAA1210Q9ULL0 1709 aa23.45■■□□□ 1.34
TSC2-226ENST00000569930 CCDC27Q2M243 656 aa23.44■■□□□ 1.34
TSC2-226ENST00000569930 PKNOX2Q96KN3 472 aa23.44■■□□□ 1.34
TSC2-226ENST00000569930 DDIT3P35638 169 aa23.43■■□□□ 1.34
TSC2-226ENST00000569930 TNRQ92752 1358 aa23.43■■□□□ 1.34
TSC2-226ENST00000569930 RRP9O43818 475 aaKnown RBP23.43■■□□□ 1.34
TSC2-226ENST00000569930 MTHFSP49914 203 aa23.43■■□□□ 1.34
TSC2-226ENST00000569930 VSIG10Q8N0Z9 540 aa23.43■■□□□ 1.34
TSC2-226ENST00000569930 GAS2L3Q86XJ1 694 aa23.42■■□□□ 1.34
TSC2-226ENST00000569930 SLC12A5Q9H2X9 1139 aa23.42■■□□□ 1.34
TSC2-226ENST00000569930 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
TSC2-226ENST00000569930 IFT172Q9UG01 1749 aa23.41■■□□□ 1.34
TSC2-226ENST00000569930 TMEM131LA2VDJ0 1609 aa23.41■■□□□ 1.34
TSC2-226ENST00000569930 TSR2Q969E8 191 aaKnown RBP23.41■■□□□ 1.34
TSC2-226ENST00000569930 NRXN1Q9ULB1 1477 aa23.4■■□□□ 1.34
TSC2-226ENST00000569930 HDAC1Q13547 482 aaPredicted RBP23.4■■□□□ 1.34
TSC2-226ENST00000569930 TNPO1Q92973 898 aaKnown RBP23.4■■□□□ 1.34
TSC2-226ENST00000569930 ISY1Q9ULR0 285 aaKnown RBP23.39■■□□□ 1.34
TSC2-226ENST00000569930 TRIM27P14373 513 aa23.39■■□□□ 1.33
TSC2-226ENST00000569930 C14orf93Q9H972 538 aaKnown RBP23.39■■□□□ 1.33
TSC2-226ENST00000569930 SMC4Q9NTJ3 1288 aa23.39■■□□□ 1.33
TSC2-226ENST00000569930 PPLO60437 1756 aa23.39■■□□□ 1.33
TSC2-226ENST00000569930 ITPRIPQ8IWB1 547 aa23.38■■□□□ 1.33
TSC2-226ENST00000569930 NEXMIFQ5QGS0 1516 aa23.38■■□□□ 1.33
TSC2-226ENST00000569930 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
TSC2-226ENST00000569930 SMC5Q8IY18 1101 aa23.36■■□□□ 1.33
TSC2-226ENST00000569930 TRIM44Q96DX7 344 aaPredicted RBP23.36■■□□□ 1.33
TSC2-226ENST00000569930 RBM25P49756 843 aaKnown RBP23.36■■□□□ 1.33
TSC2-226ENST00000569930 CFAP53Q96M91 514 aa23.36■■□□□ 1.33
TSC2-226ENST00000569930 ZMYND15Q9H091 742 aa23.36■■□□□ 1.33
TSC2-226ENST00000569930 EXOSC9Q06265 439 aaKnown RBP23.35■■□□□ 1.33
TSC2-226ENST00000569930 SNX21Q969T3 373 aa23.35■■□□□ 1.33
TSC2-226ENST00000569930 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
TSC2-226ENST00000569930 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
TSC2-226ENST00000569930 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
TSC2-226ENST00000569930 SBNO2Q9Y2G9 1366 aa23.34■■□□□ 1.33
TSC2-226ENST00000569930 DDX19BQ9UMR2 479 aa23.34■■□□□ 1.33
TSC2-226ENST00000569930 FER1L4A9Z1Z3 1794 aa23.34■■□□□ 1.33
TSC2-226ENST00000569930 SSH1Q8WYL5 1049 aa23.34■■□□□ 1.33
TSC2-226ENST00000569930 ZFYVE9O95405 1425 aa23.34■■□□□ 1.33
TSC2-226ENST00000569930 HSP90AB1P08238 724 aaKnown RBP23.33■■□□□ 1.33
TSC2-226ENST00000569930 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.32
TSC2-226ENST00000569930 RAB3GAP1Q15042 981 aa23.32■■□□□ 1.32
TSC2-226ENST00000569930 TMEM132EQ6IEE7 984 aa23.32■■□□□ 1.32
TSC2-226ENST00000569930 TRAK1Q9UPV9 953 aa23.32■■□□□ 1.32
TSC2-226ENST00000569930 ATF7IPQ6VMQ6 1270 aa23.31■■□□□ 1.32
TSC2-226ENST00000569930 GBP4Q96PP9 640 aa23.31■■□□□ 1.32
TSC2-226ENST00000569930 FOXD4L1Q9NU39 408 aa23.31■■□□□ 1.32
TSC2-226ENST00000569930 MYO3AQ8NEV4 1616 aa23.31■■□□□ 1.32
TSC2-226ENST00000569930 TMEM57Q8N5G2 664 aa23.3■■□□□ 1.32
TSC2-226ENST00000569930 CIZ1Q9ULV3 898 aaPredicted RBP23.3■■□□□ 1.32
TSC2-226ENST00000569930 NOB1Q9ULX3 412 aaKnown RBP23.3■■□□□ 1.32
TSC2-226ENST00000569930 HDGFP51858 240 aaKnown RBP23.3■■□□□ 1.32
TSC2-226ENST00000569930 LNPKQ9C0E8 428 aa23.3■■□□□ 1.32
TSC2-226ENST00000569930 RIMS2Q9UQ26 1411 aa23.3■■□□□ 1.32
TSC2-226ENST00000569930 CT47B1P0C2W7 299 aaPredicted RBP23.29■■□□□ 1.32
TSC2-226ENST00000569930 C3P01024 1663 aa23.29■■□□□ 1.32
TSC2-226ENST00000569930 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
TSC2-226ENST00000569930 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
TSC2-226ENST00000569930 ZBTB40Q9NUA8 1239 aa23.28■■□□□ 1.32
TSC2-226ENST00000569930 CD2BP2O95400 341 aaKnown RBP23.28■■□□□ 1.32
TSC2-226ENST00000569930 NUCB1Q02818 461 aa23.28■■□□□ 1.32
TSC2-226ENST00000569930 SKOR2Q2VWA4 1001 aaPredicted RBP23.27■■□□□ 1.32
TSC2-226ENST00000569930 KIF2CQ99661 725 aa23.27■■□□□ 1.32
TSC2-226ENST00000569930 ADGRB2O60241 1585 aa23.26■■□□□ 1.31
TSC2-226ENST00000569930 SETBP1Q9Y6X0 1596 aa23.24■■□□□ 1.31
TSC2-226ENST00000569930 TRIM35Q9UPQ4 493 aa23.24■■□□□ 1.31
TSC2-226ENST00000569930 CHD1LQ86WJ1 897 aa23.23■■□□□ 1.31
TSC2-226ENST00000569930 TPM2P07951 284 aa23.23■■□□□ 1.31
TSC2-226ENST00000569930 TMPOP42166 694 aaKnown RBP23.22■■□□□ 1.31
TSC2-226ENST00000569930 TMEM2Q9UHN6 1383 aa23.22■■□□□ 1.31
TSC2-226ENST00000569930 SSFA2P28290 1259 aa23.22■■□□□ 1.31
TSC2-226ENST00000569930 RBM42Q9BTD8 480 aaKnown RBP23.22■■□□□ 1.31
TSC2-226ENST00000569930 RIMS1Q86UR5 1692 aaKnown RBP23.21■■□□□ 1.31
TSC2-226ENST00000569930 U2SURPO15042 1029 aaKnown RBP23.21■■□□□ 1.31
TSC2-226ENST00000569930 PLEKHF1Q96S99 279 aa23.21■■□□□ 1.31
TSC2-226ENST00000569930 ADGRB1O14514 1584 aa23.2■■□□□ 1.3
TSC2-226ENST00000569930 PTMSP20962 102 aa23.2■■□□□ 1.3
TSC2-226ENST00000569930 CCDC173Q0VFZ6 552 aa23.2■■□□□ 1.3
TSC2-226ENST00000569930 STK26Q9P289 416 aa23.2■■□□□ 1.3
TSC2-226ENST00000569930 USP32Q8NFA0 1604 aa23.2■■□□□ 1.3
TSC2-226ENST00000569930 K7ELQ4 463 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms