RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 EVC2Q86UK5 1308 aa23.72■■□□□ 1.39
EDC3-216ENST00000569561 CRYBG1Q9Y4K1 1723 aa23.72■■□□□ 1.39
EDC3-216ENST00000569561 LMOD2Q6P5Q4 547 aa23.69■■□□□ 1.38
EDC3-216ENST00000569561 RBM6P78332 1123 aaKnown RBP23.68■■□□□ 1.38
EDC3-216ENST00000569561 TRPC5Q9UL62 973 aaPredicted RBP23.68■■□□□ 1.38
EDC3-216ENST00000569561 RGS12O14924 1447 aa23.67■■□□□ 1.38
EDC3-216ENST00000569561 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.67■■□□□ 1.38
EDC3-216ENST00000569561 CABP1Q9NZU7 370 aa23.66■■□□□ 1.38
EDC3-216ENST00000569561 SSH2Q76I76 1423 aa23.66■■□□□ 1.38
EDC3-216ENST00000569561 TIMELESSQ9UNS1 1208 aa23.65■■□□□ 1.38
EDC3-216ENST00000569561 USP6P35125 1406 aa23.65■■□□□ 1.38
EDC3-216ENST00000569561 BRD4O60885 1362 aaPredicted RBP23.65■■□□□ 1.38
EDC3-216ENST00000569561 PAK3O75914 559 aaPredicted RBP23.64■■□□□ 1.37
EDC3-216ENST00000569561 ATAD2Q6PL18 1390 aa23.64■■□□□ 1.37
EDC3-216ENST00000569561 UNC5CLQ8IV45 518 aa23.63■■□□□ 1.37
EDC3-216ENST00000569561 FAM83GA6ND36 823 aa23.62■■□□□ 1.37
EDC3-216ENST00000569561 TESK2Q96S53 571 aa23.62■■□□□ 1.37
EDC3-216ENST00000569561 PLCH1Q4KWH8 1693 aa23.61■■□□□ 1.37
EDC3-216ENST00000569561 PLEKHG5O94827 1062 aa23.61■■□□□ 1.37
EDC3-216ENST00000569561 HAP1P54257 671 aaPredicted RBP23.61■■□□□ 1.37
EDC3-216ENST00000569561 PHRF1Q9P1Y6 1649 aaKnown RBP23.61■■□□□ 1.37
EDC3-216ENST00000569561 NWD2Q9ULI1 1742 aa23.61■■□□□ 1.37
EDC3-216ENST00000569561 USP19O94966 1318 aa23.6■■□□□ 1.37
EDC3-216ENST00000569561 CPSF1Q10570 1443 aaKnown RBP23.6■■□□□ 1.37
EDC3-216ENST00000569561 GLI3P10071 1580 aa23.59■■□□□ 1.37
EDC3-216ENST00000569561 NRKQ7Z2Y5 1582 aa23.57■■□□□ 1.36
EDC3-216ENST00000569561 NRAPQ86VF7 1730 aa23.57■■□□□ 1.36
EDC3-216ENST00000569561 GJD4Q96KN9 370 aaPredicted RBP23.57■■□□□ 1.36
EDC3-216ENST00000569561 COL14A1Q05707 1796 aaKnown RBP23.57■■□□□ 1.36
EDC3-216ENST00000569561 CD163L1Q9NR16 1453 aa23.56■■□□□ 1.36
EDC3-216ENST00000569561 ST20-MTHFSA0A0A6YYL1 179 aa23.56■■□□□ 1.36
EDC3-216ENST00000569561 NUTM2GQ5VZR2 741 aa23.56■■□□□ 1.36
EDC3-216ENST00000569561 PUS7Q96PZ0 661 aaKnown RBP23.56■■□□□ 1.36
EDC3-216ENST00000569561 VPS72Q15906 364 aa23.55■■□□□ 1.36
EDC3-216ENST00000569561 ABTB2Q8N961 1025 aa23.55■■□□□ 1.36
EDC3-216ENST00000569561 AKAP12Q02952 1782 aa23.55■■□□□ 1.36
EDC3-216ENST00000569561 KIAA0232Q92628 1395 aa23.53■■□□□ 1.36
EDC3-216ENST00000569561 USP47Q96K76 1375 aa23.53■■□□□ 1.36
EDC3-216ENST00000569561 PIK3C2AO00443 1686 aa23.53■■□□□ 1.36
EDC3-216ENST00000569561 SLIT3O75094 1523 aa23.53■■□□□ 1.36
EDC3-216ENST00000569561 CPDO75976 1380 aa23.52■■□□□ 1.36
EDC3-216ENST00000569561 ZNF692Q9BU19 519 aaPredicted RBP23.52■■□□□ 1.36
EDC3-216ENST00000569561 BTG4Q9NY30 223 aa23.51■■□□□ 1.35
EDC3-216ENST00000569561 TTC21BQ7Z4L5 1316 aa23.51■■□□□ 1.35
EDC3-216ENST00000569561 NLRP13Q86W25 1043 aa23.5■■□□□ 1.35
EDC3-216ENST00000569561 UPF1Q92900 1129 aaKnown RBP eCLIP23.5■■□□□ 1.35
EDC3-216ENST00000569561 PRDM11Q9NQV5 511 aa23.5■■□□□ 1.35
EDC3-216ENST00000569561 MON2Q7Z3U7 1717 aa23.5■■□□□ 1.35
EDC3-216ENST00000569561 CCER1Q8TC90 406 aaPredicted RBP23.49■■□□□ 1.35
EDC3-216ENST00000569561 LMO7Q8WWI1 1683 aa23.48■■□□□ 1.35
EDC3-216ENST00000569561 ONECUT3O60422 494 aaPredicted RBP23.47■■□□□ 1.35
EDC3-216ENST00000569561 GCP02774 474 aa23.47■■□□□ 1.35
EDC3-216ENST00000569561 ZC3H6P61129 1189 aaKnown RBP23.47■■□□□ 1.35
EDC3-216ENST00000569561 SLC12A5Q9H2X9 1139 aa23.47■■□□□ 1.35
EDC3-216ENST00000569561 TTC21AQ8NDW8 1320 aa23.47■■□□□ 1.35
EDC3-216ENST00000569561 KTN1Q86UP2 1357 aaKnown RBP23.47■■□□□ 1.35
EDC3-216ENST00000569561 CHRNA2Q15822 529 aa23.46■■□□□ 1.35
EDC3-216ENST00000569561 SLC24A1O60721 1099 aa23.45■■□□□ 1.34
EDC3-216ENST00000569561 NLRP6P59044 892 aa23.45■■□□□ 1.34
EDC3-216ENST00000569561 A0A1W2PP64 1363 aa23.44■■□□□ 1.34
EDC3-216ENST00000569561 NINLQ9Y2I6 1382 aa23.44■■□□□ 1.34
EDC3-216ENST00000569561 CAMTA1Q9Y6Y1 1673 aa23.44■■□□□ 1.34
EDC3-216ENST00000569561 SPATA31A5Q5VU36 1347 aa23.43■■□□□ 1.34
EDC3-216ENST00000569561 SPATA31A7Q8IWB4 1347 aa23.43■■□□□ 1.34
EDC3-216ENST00000569561 USP31Q70CQ4 1352 aa23.42■■□□□ 1.34
EDC3-216ENST00000569561 USP54Q70EL1 1684 aa23.42■■□□□ 1.34
EDC3-216ENST00000569561 EDC4Q6P2E9 1401 aaKnown RBP23.42■■□□□ 1.34
EDC3-216ENST00000569561 TMC1Q8TDI8 760 aa23.41■■□□□ 1.34
EDC3-216ENST00000569561 NFAT5O94916 1531 aa23.4■■□□□ 1.34
EDC3-216ENST00000569561 SEPT12Q8IYM1 358 aa23.4■■□□□ 1.34
EDC3-216ENST00000569561 HDGFL2Q7Z4V5 671 aaPredicted RBP23.38■■□□□ 1.33
EDC3-216ENST00000569561 CCDC9Q9Y3X0 531 aaKnown RBP23.38■■□□□ 1.33
EDC3-216ENST00000569561 AATKQ6ZMQ8 1374 aa23.38■■□□□ 1.33
EDC3-216ENST00000569561 COL5A2P05997 1499 aaPredicted RBP23.37■■□□□ 1.33
EDC3-216ENST00000569561 SPATA31A1Q5TZJ5 1347 aa23.37■■□□□ 1.33
EDC3-216ENST00000569561 TMF1P82094 1093 aa23.37■■□□□ 1.33
EDC3-216ENST00000569561 TERF2IPQ9NYB0 399 aa23.37■■□□□ 1.33
EDC3-216ENST00000569561 THSD7AQ9UPZ6 1657 aa23.37■■□□□ 1.33
EDC3-216ENST00000569561 COL18A1P39060 1754 aa23.37■■□□□ 1.33
EDC3-216ENST00000569561 ZRANB1Q9UGI0 708 aa23.36■■□□□ 1.33
EDC3-216ENST00000569561 EP400Q96L91 3159 aa23.36■■□□□ 1.33
EDC3-216ENST00000569561 OVOS2A0A0J9YW53 1432 aa23.35■■□□□ 1.33
EDC3-216ENST00000569561 OVOS2Q6IE36 1432 aa23.35■■□□□ 1.33
EDC3-216ENST00000569561 FAM98CQ17RN3 349 aaKnown RBP23.35■■□□□ 1.33
EDC3-216ENST00000569561 ARHGEF25Q86VW2 580 aa23.35■■□□□ 1.33
EDC3-216ENST00000569561 NME9Q86XW9 330 aa23.35■■□□□ 1.33
EDC3-216ENST00000569561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.35■■□□□ 1.33
EDC3-216ENST00000569561 ANKRD36BQ8N2N9 1353 aa23.35■■□□□ 1.33
EDC3-216ENST00000569561 BRWD3Q6RI45 1802 aa23.34■■□□□ 1.33
EDC3-216ENST00000569561 KCNH5Q8NCM2 988 aa23.34■■□□□ 1.33
EDC3-216ENST00000569561 STRN4Q9NRL3 753 aa23.33■■□□□ 1.33
EDC3-216ENST00000569561 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
EDC3-216ENST00000569561 ABCC6O95255 1503 aa23.3■■□□□ 1.32
EDC3-216ENST00000569561 AXIN2Q9Y2T1 843 aa23.3■■□□□ 1.32
EDC3-216ENST00000569561 CDCA8Q53HL2 280 aa23.29■■□□□ 1.32
EDC3-216ENST00000569561 BARGINQ6ZT62 677 aa23.29■■□□□ 1.32
EDC3-216ENST00000569561 KRT27Q7Z3Y8 459 aa23.29■■□□□ 1.32
EDC3-216ENST00000569561 MYOM1P52179 1685 aa23.28■■□□□ 1.32
EDC3-216ENST00000569561 CRB1P82279 1406 aa23.27■■□□□ 1.32
EDC3-216ENST00000569561 EVA1CP58658 441 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms