RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 MPNDQ8N594 471 aa7.35□□□□□ -1.23
TCF4-239ENST00000568186 ZSCAN1Q8NBB4 408 aa7.35□□□□□ -1.23
TCF4-239ENST00000568186 PLEKHG3A1L390 1219 aa7.34□□□□□ -1.23
TCF4-239ENST00000568186 SPDYE5A6NIY4 337 aa7.34□□□□□ -1.23
TCF4-239ENST00000568186 ADH1CP00326 375 aa7.34□□□□□ -1.23
TCF4-239ENST00000568186 TIMP2P16035 220 aa7.34□□□□□ -1.23
TCF4-239ENST00000568186 MRPL14Q6P1L8 145 aaKnown RBP7.34□□□□□ -1.23
TCF4-239ENST00000568186 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.34□□□□□ -1.23
TCF4-239ENST00000568186 WDR4P57081 412 aaKnown RBP7.33□□□□□ -1.24
TCF4-239ENST00000568186 AMHR2Q16671 573 aa7.33□□□□□ -1.24
TCF4-239ENST00000568186 GIGYF2Q6Y7W6 1299 aaKnown RBP7.33□□□□□ -1.24
TCF4-239ENST00000568186 PURBQ96QR8 312 aaKnown RBP7.33□□□□□ -1.24
TCF4-239ENST00000568186 KLF16Q9BXK1 252 aaPredicted RBP7.32□□□□□ -1.24
TCF4-239ENST00000568186 SOBPA7XYQ1 873 aa7.31□□□□□ -1.24
TCF4-239ENST00000568186 CTHP32929 405 aa7.31□□□□□ -1.24
TCF4-239ENST00000568186 SCARF1Q14162 830 aa7.31□□□□□ -1.24
TCF4-239ENST00000568186 LYPD8Q6UX82 237 aa7.31□□□□□ -1.24
TCF4-239ENST00000568186 BEGAINQ9BUH8 593 aa7.31□□□□□ -1.24
TCF4-239ENST00000568186 CFAP99D6REC4 459 aa7.3□□□□□ -1.24
TCF4-239ENST00000568186 RSBN1LQ6PCB5 846 aaPredicted RBP7.3□□□□□ -1.24
TCF4-239ENST00000568186 BARGINQ6ZT62 677 aa7.3□□□□□ -1.24
TCF4-239ENST00000568186 FAM174AQ8TBP5 190 aa7.3□□□□□ -1.24
TCF4-239ENST00000568186 FOXJ1Q92949 421 aa7.3□□□□□ -1.24
TCF4-239ENST00000568186 TBC1D2Q9BYX2 928 aa7.3□□□□□ -1.24
TCF4-239ENST00000568186 MAP10Q9P2G4 905 aa7.3□□□□□ -1.24
TCF4-239ENST00000568186 ZMYND10O75800 440 aa7.29□□□□□ -1.24
TCF4-239ENST00000568186 F12P00748 615 aaPredicted RBP7.29□□□□□ -1.24
TCF4-239ENST00000568186 VSIG8P0DPA2 414 aa7.29□□□□□ -1.24
TCF4-239ENST00000568186 GJA5P36382 358 aa7.29□□□□□ -1.24
TCF4-239ENST00000568186 PCDHB15Q9Y5E8 787 aa7.29□□□□□ -1.24
TCF4-239ENST00000568186 NR3C2P08235 984 aa7.28□□□□□ -1.24
TCF4-239ENST00000568186 CDK15Q96Q40 435 aa7.28□□□□□ -1.24
TCF4-239ENST00000568186 ZFAND3Q9H8U3 227 aa7.28□□□□□ -1.24
TCF4-239ENST00000568186 ZIC2O95409 532 aaPredicted RBP7.27□□□□□ -1.25
TCF4-239ENST00000568186 ARID5BQ14865 1188 aa7.27□□□□□ -1.25
TCF4-239ENST00000568186 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
TCF4-239ENST00000568186 PARP9Q8IXQ6 854 aa7.27□□□□□ -1.25
TCF4-239ENST00000568186 ITPKCQ96DU7 683 aa7.27□□□□□ -1.25
TCF4-239ENST00000568186 SPTLC1O15269 473 aa7.26□□□□□ -1.25
TCF4-239ENST00000568186 HRCP23327 699 aa7.26□□□□□ -1.25
TCF4-239ENST00000568186 ZBTB3Q9H5J0 574 aa7.26□□□□□ -1.25
TCF4-239ENST00000568186 DIXDC1Q155Q3 683 aa7.25□□□□□ -1.25
TCF4-239ENST00000568186 C6orf118Q5T5N4 469 aa7.25□□□□□ -1.25
TCF4-239ENST00000568186 CABLES1Q8TDN4 633 aa7.25□□□□□ -1.25
TCF4-239ENST00000568186 MAN1A2O60476 641 aa7.24□□□□□ -1.25
TCF4-239ENST00000568186 NR5A1Q13285 461 aa7.24□□□□□ -1.25
TCF4-239ENST00000568186 ZC3H15Q8WU90 426 aaKnown RBP7.24□□□□□ -1.25
TCF4-239ENST00000568186 PER1O15534 1290 aaPredicted RBP7.23□□□□□ -1.25
TCF4-239ENST00000568186 GRM5P41594 1212 aa7.23□□□□□ -1.25
TCF4-239ENST00000568186 AGERQ15109 404 aa7.23□□□□□ -1.25
TCF4-239ENST00000568186 PRPF38BQ5VTL8 546 aaKnown RBP7.23□□□□□ -1.25
TCF4-239ENST00000568186 MEIOBQ8N635 442 aa7.23□□□□□ -1.25
TCF4-239ENST00000568186 CSPP1Q1MSJ5 1256 aa7.22□□□□□ -1.25
TCF4-239ENST00000568186 RIC3Q7Z5B4 369 aa7.22□□□□□ -1.25
TCF4-239ENST00000568186 BPHLQ86WA6 291 aaPredicted RBP7.22□□□□□ -1.25
TCF4-239ENST00000568186 LINC00528Q8N1L1 170 aa7.22□□□□□ -1.25
TCF4-239ENST00000568186 PPFIA3O75145 1194 aa7.21□□□□□ -1.26
TCF4-239ENST00000568186 BMP2P12643 396 aa7.21□□□□□ -1.26
TCF4-239ENST00000568186 C1QTNF2Q9BXJ5 285 aa7.21□□□□□ -1.26
TCF4-239ENST00000568186 TRIM66O15016 1216 aa7.2□□□□□ -1.26
TCF4-239ENST00000568186 FSHRP23945 695 aa7.2□□□□□ -1.26
TCF4-239ENST00000568186 UPP2O95045 317 aa7.19□□□□□ -1.26
TCF4-239ENST00000568186 QPCTQ16769 361 aa7.19□□□□□ -1.26
TCF4-239ENST00000568186 SH3RF1Q7Z6J0 888 aa7.19□□□□□ -1.26
TCF4-239ENST00000568186 TSC1Q92574 1164 aa7.19□□□□□ -1.26
TCF4-239ENST00000568186 LIMD1Q9UGP4 676 aa7.19□□□□□ -1.26
TCF4-239ENST00000568186 DNMT3LQ9UJW3 386 aa7.19□□□□□ -1.26
TCF4-239ENST00000568186 SOS2Q07890 1332 aaPredicted RBP7.19□□□□□ -1.26
TCF4-239ENST00000568186 BCANQ96GW7 911 aa7.18□□□□□ -1.26
TCF4-239ENST00000568186 MAP4K5Q9Y4K4 846 aa7.18□□□□□ -1.26
TCF4-239ENST00000568186 LOC100996750A0A140TA64 210 aa7.17□□□□□ -1.26
TCF4-239ENST00000568186 NBPF14Q5TI25 921 aa7.17□□□□□ -1.26
TCF4-239ENST00000568186 MYSM1Q5VVJ2 828 aa7.17□□□□□ -1.26
TCF4-239ENST00000568186 SH3BP5LQ7L8J4 393 aa7.17□□□□□ -1.26
TCF4-239ENST00000568186 TRMT44Q8IYL2 757 aaKnown RBP7.17□□□□□ -1.26
TCF4-239ENST00000568186 ARMC2Q8NEN0 867 aa7.17□□□□□ -1.26
TCF4-239ENST00000568186 KRTAP4-6Q9BYQ5 205 aa7.17□□□□□ -1.26
TCF4-239ENST00000568186 MAGEB6P1A0A0J9YX57 407 aa7.16□□□□□ -1.26
TCF4-239ENST00000568186 VASH1Q7L8A9 365 aaPredicted RBP7.16□□□□□ -1.26
TCF4-239ENST00000568186 NUTM2BA6NNL0 878 aaPredicted RBP7.15□□□□□ -1.26
TCF4-239ENST00000568186 NUTM2EB1AL46 878 aaPredicted RBP7.15□□□□□ -1.26
TCF4-239ENST00000568186 LILRB3O75022 631 aa7.15□□□□□ -1.26
TCF4-239ENST00000568186 GSK3AP49840 483 aa7.15□□□□□ -1.26
TCF4-239ENST00000568186 KRT76Q01546 638 aa7.15□□□□□ -1.26
TCF4-239ENST00000568186 TUSC1Q2TAM9 212 aa7.15□□□□□ -1.26
TCF4-239ENST00000568186 NUTM2DQ5VT03 806 aaPredicted RBP7.15□□□□□ -1.26
TCF4-239ENST00000568186 NUTM2AQ8IVF1 878 aaPredicted RBP7.15□□□□□ -1.26
TCF4-239ENST00000568186 TSEN34Q9BSV6 310 aaKnown RBP7.15□□□□□ -1.26
TCF4-239ENST00000568186 CCDC116Q8IYX3 515 aa7.14□□□□□ -1.27
TCF4-239ENST00000568186 HELBQ8NG08 1087 aaPredicted RBP7.14□□□□□ -1.27
TCF4-239ENST00000568186 AK7Q96M32 723 aa7.14□□□□□ -1.27
TCF4-239ENST00000568186 EMILIN1Q9Y6C2 1016 aa7.14□□□□□ -1.27
TCF4-239ENST00000568186 TTLL8A6PVC2 850 aa7.13□□□□□ -1.27
TCF4-239ENST00000568186 KCNMA1Q12791 1236 aa7.13□□□□□ -1.27
TCF4-239ENST00000568186 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.13□□□□□ -1.27
TCF4-239ENST00000568186 RTL5Q5HYW3 569 aaPredicted RBP7.13□□□□□ -1.27
TCF4-239ENST00000568186 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
TCF4-239ENST00000568186 CARD14Q9BXL6 1004 aa7.13□□□□□ -1.27
TCF4-239ENST00000568186 PTSQ03393 145 aa7.12□□□□□ -1.27
TCF4-239ENST00000568186 ERFEQ4G0M1 354 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms