RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 CDK12Q9NYV4 1490 aaPredicted RBP32.37■■■□□ 2.77
SPG7-217ENST00000568151 RBM6P78332 1123 aaKnown RBP32.37■■■□□ 2.77
SPG7-217ENST00000568151 CRYBG1Q9Y4K1 1723 aa32.37■■■□□ 2.77
SPG7-217ENST00000568151 ATRNO75882 1429 aa32.36■■■□□ 2.77
SPG7-217ENST00000568151 CLSPNQ9HAW4 1339 aa32.36■■■□□ 2.77
SPG7-217ENST00000568151 SLIT2O94813 1529 aa32.36■■■□□ 2.77
SPG7-217ENST00000568151 SBNO2Q9Y2G9 1366 aa32.35■■■□□ 2.77
SPG7-217ENST00000568151 TRPC5Q9UL62 973 aaPredicted RBP32.35■■■□□ 2.77
SPG7-217ENST00000568151 CABP1Q9NZU7 370 aa32.34■■■□□ 2.77
SPG7-217ENST00000568151 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.33■■■□□ 2.77
SPG7-217ENST00000568151 RGS12O14924 1447 aa32.3■■■□□ 2.76
SPG7-217ENST00000568151 PLCH1Q4KWH8 1693 aa32.3■■■□□ 2.76
SPG7-217ENST00000568151 UNC5CLQ8IV45 518 aa32.28■■■□□ 2.76
SPG7-217ENST00000568151 FAM83GA6ND36 823 aa32.27■■■□□ 2.76
SPG7-217ENST00000568151 NWD2Q9ULI1 1742 aa32.26■■■□□ 2.76
SPG7-217ENST00000568151 NUTM2GQ5VZR2 741 aa32.26■■■□□ 2.75
SPG7-217ENST00000568151 TIMELESSQ9UNS1 1208 aa32.26■■■□□ 2.75
SPG7-217ENST00000568151 PHRF1Q9P1Y6 1649 aaKnown RBP32.25■■■□□ 2.75
SPG7-217ENST00000568151 USP6P35125 1406 aa32.25■■■□□ 2.75
SPG7-217ENST00000568151 ATAD2Q6PL18 1390 aa32.24■■■□□ 2.75
SPG7-217ENST00000568151 BRD4O60885 1362 aaPredicted RBP32.22■■■□□ 2.75
SPG7-217ENST00000568151 ABTB2Q8N961 1025 aa32.22■■■□□ 2.75
SPG7-217ENST00000568151 GJD4Q96KN9 370 aaPredicted RBP32.22■■■□□ 2.75
SPG7-217ENST00000568151 COL14A1Q05707 1796 aaKnown RBP32.21■■■□□ 2.75
SPG7-217ENST00000568151 AKAP12Q02952 1782 aa32.2■■■□□ 2.75
SPG7-217ENST00000568151 SSH2Q76I76 1423 aa32.2■■■□□ 2.75
SPG7-217ENST00000568151 ST20-MTHFSA0A0A6YYL1 179 aa32.19■■■□□ 2.74
SPG7-217ENST00000568151 TESK2Q96S53 571 aa32.19■■■□□ 2.74
SPG7-217ENST00000568151 GLI3P10071 1580 aa32.19■■■□□ 2.74
SPG7-217ENST00000568151 NRAPQ86VF7 1730 aa32.18■■■□□ 2.74
SPG7-217ENST00000568151 CCER1Q8TC90 406 aaPredicted RBP32.18■■■□□ 2.74
SPG7-217ENST00000568151 USP19O94966 1318 aa32.16■■■□□ 2.74
SPG7-217ENST00000568151 CPSF1Q10570 1443 aaKnown RBP32.16■■■□□ 2.74
SPG7-217ENST00000568151 NRKQ7Z2Y5 1582 aa32.15■■■□□ 2.74
SPG7-217ENST00000568151 VPS72Q15906 364 aa32.15■■■□□ 2.74
SPG7-217ENST00000568151 PRDM11Q9NQV5 511 aa32.15■■■□□ 2.74
SPG7-217ENST00000568151 BTG4Q9NY30 223 aa32.15■■■□□ 2.74
SPG7-217ENST00000568151 KIAA0232Q92628 1395 aa32.15■■■□□ 2.74
SPG7-217ENST00000568151 ZNF692Q9BU19 519 aaPredicted RBP32.14■■■□□ 2.74
SPG7-217ENST00000568151 NLRP13Q86W25 1043 aa32.13■■■□□ 2.73
SPG7-217ENST00000568151 PIK3C2AO00443 1686 aa32.12■■■□□ 2.73
SPG7-217ENST00000568151 USP47Q96K76 1375 aa32.12■■■□□ 2.73
SPG7-217ENST00000568151 ZC3H6P61129 1189 aaKnown RBP32.11■■■□□ 2.73
SPG7-217ENST00000568151 MON2Q7Z3U7 1717 aa32.1■■■□□ 2.73
SPG7-217ENST00000568151 PUS7Q96PZ0 661 aaKnown RBP32.1■■■□□ 2.73
SPG7-217ENST00000568151 CD163L1Q9NR16 1453 aa32.1■■■□□ 2.73
SPG7-217ENST00000568151 TTC21BQ7Z4L5 1316 aa32.09■■■□□ 2.73
SPG7-217ENST00000568151 CHRNA2Q15822 529 aa32.09■■■□□ 2.73
SPG7-217ENST00000568151 UPF1Q92900 1129 aaKnown RBP eCLIP32.09■■■□□ 2.73
SPG7-217ENST00000568151 KTN1Q86UP2 1357 aaKnown RBP32.07■■■□□ 2.73
SPG7-217ENST00000568151 NLRP6P59044 892 aa32.07■■■□□ 2.72
SPG7-217ENST00000568151 SLC12A5Q9H2X9 1139 aa32.07■■■□□ 2.72
SPG7-217ENST00000568151 CPDO75976 1380 aa32.07■■■□□ 2.72
SPG7-217ENST00000568151 GCP02774 474 aa32.06■■■□□ 2.72
SPG7-217ENST00000568151 TMC1Q8TDI8 760 aa32.06■■■□□ 2.72
SPG7-217ENST00000568151 CCDC9Q9Y3X0 531 aaKnown RBP32.06■■■□□ 2.72
SPG7-217ENST00000568151 SLIT3O75094 1523 aa32.05■■■□□ 2.72
SPG7-217ENST00000568151 TTC21AQ8NDW8 1320 aa32.03■■■□□ 2.72
SPG7-217ENST00000568151 SLC24A1O60721 1099 aa32.03■■■□□ 2.72
SPG7-217ENST00000568151 LMO7Q8WWI1 1683 aa32.01■■■□□ 2.71
SPG7-217ENST00000568151 ONECUT3O60422 494 aaPredicted RBP32■■■□□ 2.71
SPG7-217ENST00000568151 BRWD3Q6RI45 1802 aa32■■■□□ 2.71
SPG7-217ENST00000568151 SPATA31A5Q5VU36 1347 aa31.99■■■□□ 2.71
SPG7-217ENST00000568151 SPATA31A7Q8IWB4 1347 aa31.99■■■□□ 2.71
SPG7-217ENST00000568151 CAMTA1Q9Y6Y1 1673 aa31.99■■■□□ 2.71
SPG7-217ENST00000568151 A0A1W2PP64 1363 aa31.97■■■□□ 2.71
SPG7-217ENST00000568151 HDGFL2Q7Z4V5 671 aaPredicted RBP31.97■■■□□ 2.71
SPG7-217ENST00000568151 SEPT12Q8IYM1 358 aa31.97■■■□□ 2.71
SPG7-217ENST00000568151 TMF1P82094 1093 aa31.96■■■□□ 2.71
SPG7-217ENST00000568151 TERF2IPQ9NYB0 399 aa31.96■■■□□ 2.71
SPG7-217ENST00000568151 NINLQ9Y2I6 1382 aa31.95■■■□□ 2.71
SPG7-217ENST00000568151 EP400Q96L91 3159 aa31.95■■■□□ 2.71
SPG7-217ENST00000568151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.95■■■□□ 2.71
SPG7-217ENST00000568151 STRN4Q9NRL3 753 aa31.95■■■□□ 2.71
SPG7-217ENST00000568151 EDC4Q6P2E9 1401 aaKnown RBP31.93■■■□□ 2.7
SPG7-217ENST00000568151 FAM98CQ17RN3 349 aaKnown RBP31.93■■■□□ 2.7
SPG7-217ENST00000568151 ZRANB1Q9UGI0 708 aa31.93■■■□□ 2.7
SPG7-217ENST00000568151 NME9Q86XW9 330 aa31.92■■■□□ 2.7
SPG7-217ENST00000568151 USP54Q70EL1 1684 aa31.92■■■□□ 2.7
SPG7-217ENST00000568151 USP31Q70CQ4 1352 aa31.92■■■□□ 2.7
SPG7-217ENST00000568151 SPATA31A1Q5TZJ5 1347 aa31.91■■■□□ 2.7
SPG7-217ENST00000568151 COL18A1P39060 1754 aa31.9■■■□□ 2.7
SPG7-217ENST00000568151 AATKQ6ZMQ8 1374 aa31.9■■■□□ 2.7
SPG7-217ENST00000568151 ZBTB7CA1YPR0 619 aa31.89■■■□□ 2.7
SPG7-217ENST00000568151 EVA1CP58658 441 aa31.89■■■□□ 2.7
SPG7-217ENST00000568151 KCNH5Q8NCM2 988 aa31.89■■■□□ 2.7
SPG7-217ENST00000568151 NFAT5O94916 1531 aa31.89■■■□□ 2.7
SPG7-217ENST00000568151 COL5A2P05997 1499 aaPredicted RBP31.88■■■□□ 2.69
SPG7-217ENST00000568151 THSD7AQ9UPZ6 1657 aa31.87■■■□□ 2.69
SPG7-217ENST00000568151 SOX12O15370 315 aa31.87■■■□□ 2.69
SPG7-217ENST00000568151 LARP1Q6PKG0 1096 aaKnown RBP31.87■■■□□ 2.69
SPG7-217ENST00000568151 ARHGEF25Q86VW2 580 aa31.87■■■□□ 2.69
SPG7-217ENST00000568151 A0A0G2JS52 829 aa31.85■■■□□ 2.69
SPG7-217ENST00000568151 MYT1Q01538 1121 aa31.85■■■□□ 2.69
SPG7-217ENST00000568151 ANKRD36BQ8N2N9 1353 aa31.84■■■□□ 2.69
SPG7-217ENST00000568151 CDCA8Q53HL2 280 aa31.84■■■□□ 2.69
SPG7-217ENST00000568151 KRT27Q7Z3Y8 459 aa31.84■■■□□ 2.69
SPG7-217ENST00000568151 USP35Q9P2H5 1018 aa31.82■■■□□ 2.68
SPG7-217ENST00000568151 AXIN2Q9Y2T1 843 aa31.82■■■□□ 2.68
SPG7-217ENST00000568151 RGPD5Q99666 1765 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms