RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
HDGFL3-205ENST00000568129 ATRNO75882 1429 aa11.66□□□□□ -0.54
HDGFL3-205ENST00000568129 PPIP5K1Q6PFW1 1433 aa11.66□□□□□ -0.54
HDGFL3-205ENST00000568129 SSH2Q76I76 1423 aa11.66□□□□□ -0.54
HDGFL3-205ENST00000568129 RXRBP28702 533 aa11.65□□□□□ -0.54
HDGFL3-205ENST00000568129 QTRT2Q9H974 415 aaKnown RBP11.65□□□□□ -0.54
HDGFL3-205ENST00000568129 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.55
HDGFL3-205ENST00000568129 CPSF1Q10570 1443 aaKnown RBP11.64□□□□□ -0.55
HDGFL3-205ENST00000568129 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
HDGFL3-205ENST00000568129 RBM6P78332 1123 aaKnown RBP11.64□□□□□ -0.55
HDGFL3-205ENST00000568129 SRPK2P78362 688 aaKnown RBP11.64□□□□□ -0.55
HDGFL3-205ENST00000568129 TESK2Q96S53 571 aa11.64□□□□□ -0.55
HDGFL3-205ENST00000568129 CABP1Q9NZU7 370 aa11.64□□□□□ -0.55
HDGFL3-205ENST00000568129 PHRF1Q9P1Y6 1649 aaKnown RBP11.64□□□□□ -0.55
HDGFL3-205ENST00000568129 USP21Q9UK80 565 aa11.63□□□□□ -0.55
HDGFL3-205ENST00000568129 TRPC5Q9UL62 973 aaPredicted RBP11.63□□□□□ -0.55
HDGFL3-205ENST00000568129 COL14A1Q05707 1796 aaKnown RBP11.63□□□□□ -0.55
HDGFL3-205ENST00000568129 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
HDGFL3-205ENST00000568129 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
HDGFL3-205ENST00000568129 NRAPQ86VF7 1730 aa11.63□□□□□ -0.55
HDGFL3-205ENST00000568129 USP6P35125 1406 aa11.62□□□□□ -0.55
HDGFL3-205ENST00000568129 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
HDGFL3-205ENST00000568129 UNC5CLQ8IV45 518 aa11.62□□□□□ -0.55
HDGFL3-205ENST00000568129 CABLES1Q8TDN4 633 aa11.62□□□□□ -0.55
HDGFL3-205ENST00000568129 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
HDGFL3-205ENST00000568129 USP19O94966 1318 aa11.61□□□□□ -0.55
HDGFL3-205ENST00000568129 NRKQ7Z2Y5 1582 aa11.61□□□□□ -0.55
HDGFL3-205ENST00000568129 USP54Q70EL1 1684 aa11.61□□□□□ -0.55
HDGFL3-205ENST00000568129 CD163L1Q9NR16 1453 aa11.6□□□□□ -0.55
HDGFL3-205ENST00000568129 ST20-MTHFSA0A0A6YYL1 179 aa11.6□□□□□ -0.55
HDGFL3-205ENST00000568129 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
HDGFL3-205ENST00000568129 GLI3P10071 1580 aa11.59□□□□□ -0.55
HDGFL3-205ENST00000568129 CPDO75976 1380 aa11.59□□□□□ -0.55
HDGFL3-205ENST00000568129 ONECUT3O60422 494 aaPredicted RBP11.59□□□□□ -0.55
HDGFL3-205ENST00000568129 GJD4Q96KN9 370 aaPredicted RBP11.59□□□□□ -0.55
HDGFL3-205ENST00000568129 PAK3O75914 559 aaPredicted RBP11.58□□□□□ -0.56
HDGFL3-205ENST00000568129 VPS72Q15906 364 aa11.58□□□□□ -0.56
HDGFL3-205ENST00000568129 LMOD2Q6P5Q4 547 aa11.58□□□□□ -0.56
HDGFL3-205ENST00000568129 ABTB2Q8N961 1025 aa11.58□□□□□ -0.56
HDGFL3-205ENST00000568129 SLIT3O75094 1523 aa11.58□□□□□ -0.56
HDGFL3-205ENST00000568129 COL18A1P39060 1754 aa11.58□□□□□ -0.56
HDGFL3-205ENST00000568129 RGS12O14924 1447 aa11.58□□□□□ -0.56
HDGFL3-205ENST00000568129 LMO7Q8WWI1 1683 aa11.57□□□□□ -0.56
HDGFL3-205ENST00000568129 NLRP13Q86W25 1043 aa11.57□□□□□ -0.56
HDGFL3-205ENST00000568129 BRWD3Q6RI45 1802 aa11.57□□□□□ -0.56
HDGFL3-205ENST00000568129 TTC21AQ8NDW8 1320 aa11.57□□□□□ -0.56
HDGFL3-205ENST00000568129 USP47Q96K76 1375 aa11.56□□□□□ -0.56
HDGFL3-205ENST00000568129 NINLQ9Y2I6 1382 aa11.56□□□□□ -0.56
HDGFL3-205ENST00000568129 TTC21BQ7Z4L5 1316 aa11.56□□□□□ -0.56
HDGFL3-205ENST00000568129 USP31Q70CQ4 1352 aa11.55□□□□□ -0.56
HDGFL3-205ENST00000568129 GCP02774 474 aa11.55□□□□□ -0.56
HDGFL3-205ENST00000568129 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
HDGFL3-205ENST00000568129 KIAA0232Q92628 1395 aa11.54□□□□□ -0.56
HDGFL3-205ENST00000568129 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
HDGFL3-205ENST00000568129 SLC12A5Q9H2X9 1139 aa11.54□□□□□ -0.56
HDGFL3-205ENST00000568129 KTN1Q86UP2 1357 aaKnown RBP11.54□□□□□ -0.56
HDGFL3-205ENST00000568129 CAMTA1Q9Y6Y1 1673 aa11.53□□□□□ -0.56
HDGFL3-205ENST00000568129 NLRP6P59044 892 aa11.53□□□□□ -0.56
HDGFL3-205ENST00000568129 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDGFL3-205ENST00000568129 BTG4Q9NY30 223 aa11.53□□□□□ -0.56
HDGFL3-205ENST00000568129 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
HDGFL3-205ENST00000568129 EDC4Q6P2E9 1401 aaKnown RBP11.52□□□□□ -0.56
HDGFL3-205ENST00000568129 TMF1P82094 1093 aa11.52□□□□□ -0.57
HDGFL3-205ENST00000568129 NUTM2GQ5VZR2 741 aa11.52□□□□□ -0.57
HDGFL3-205ENST00000568129 PRDM11Q9NQV5 511 aa11.52□□□□□ -0.57
HDGFL3-205ENST00000568129 SPATA31A5Q5VU36 1347 aa11.52□□□□□ -0.57
HDGFL3-205ENST00000568129 SPATA31A7Q8IWB4 1347 aa11.52□□□□□ -0.57
HDGFL3-205ENST00000568129 AATKQ6ZMQ8 1374 aa11.52□□□□□ -0.57
HDGFL3-205ENST00000568129 NFAT5O94916 1531 aa11.51□□□□□ -0.57
HDGFL3-205ENST00000568129 TERF2IPQ9NYB0 399 aa11.51□□□□□ -0.57
HDGFL3-205ENST00000568129 THSD7AQ9UPZ6 1657 aa11.51□□□□□ -0.57
HDGFL3-205ENST00000568129 A0A1W2PP64 1363 aa11.51□□□□□ -0.57
HDGFL3-205ENST00000568129 ABCC6O95255 1503 aa11.5□□□□□ -0.57
HDGFL3-205ENST00000568129 MYOM1P52179 1685 aa11.5□□□□□ -0.57
HDGFL3-205ENST00000568129 EP400Q96L91 3159 aa11.5□□□□□ -0.57
HDGFL3-205ENST00000568129 ZC3H6P61129 1189 aaKnown RBP11.5□□□□□ -0.57
HDGFL3-205ENST00000568129 ARHGEF25Q86VW2 580 aa11.5□□□□□ -0.57
HDGFL3-205ENST00000568129 KCNH5Q8NCM2 988 aa11.5□□□□□ -0.57
HDGFL3-205ENST00000568129 CHRNA2Q15822 529 aa11.49□□□□□ -0.57
HDGFL3-205ENST00000568129 CDCA8Q53HL2 280 aa11.49□□□□□ -0.57
HDGFL3-205ENST00000568129 HDGFL2Q7Z4V5 671 aaPredicted RBP11.49□□□□□ -0.57
HDGFL3-205ENST00000568129 SPATA31A1Q5TZJ5 1347 aa11.49□□□□□ -0.57
HDGFL3-205ENST00000568129 ANKRD36BQ8N2N9 1353 aa11.49□□□□□ -0.57
HDGFL3-205ENST00000568129 LTN1O94822 1766 aa11.49□□□□□ -0.57
HDGFL3-205ENST00000568129 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
HDGFL3-205ENST00000568129 BARGINQ6ZT62 677 aa11.48□□□□□ -0.57
HDGFL3-205ENST00000568129 TMC1Q8TDI8 760 aa11.48□□□□□ -0.57
HDGFL3-205ENST00000568129 OVOS2A0A0J9YW53 1432 aa11.48□□□□□ -0.57
HDGFL3-205ENST00000568129 OVOS2Q6IE36 1432 aa11.48□□□□□ -0.57
HDGFL3-205ENST00000568129 COL5A2P05997 1499 aaPredicted RBP11.48□□□□□ -0.57
HDGFL3-205ENST00000568129 SEPT12Q8IYM1 358 aa11.47□□□□□ -0.57
HDGFL3-205ENST00000568129 NME9Q86XW9 330 aa11.46□□□□□ -0.57
HDGFL3-205ENST00000568129 CCDC125Q86Z20 511 aa11.46□□□□□ -0.57
HDGFL3-205ENST00000568129 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
HDGFL3-205ENST00000568129 AXIN2Q9Y2T1 843 aa11.46□□□□□ -0.57
HDGFL3-205ENST00000568129 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.57
HDGFL3-205ENST00000568129 WNK3Q9BYP7 1800 aa11.45□□□□□ -0.58
HDGFL3-205ENST00000568129 EIF4G2P78344 907 aaKnown RBP eCLIP11.45□□□□□ -0.58
HDGFL3-205ENST00000568129 PARP4Q9UKK3 1724 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-205ENST00000568129 KIF20BQ96Q89 1820 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms