RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 KTN1Q86UP2 1357 aaKnown RBP24.99■■□□□ 1.59
COMMD4-222ENST00000568034 ZNF692Q9BU19 519 aaPredicted RBP24.99■■□□□ 1.59
COMMD4-222ENST00000568034 SHPRHQ149N8 1683 aa24.98■■□□□ 1.59
COMMD4-222ENST00000568034 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
COMMD4-222ENST00000568034 LRRC59Q96AG4 307 aaKnown RBP24.98■■□□□ 1.59
COMMD4-222ENST00000568034 TERF2IPQ9NYB0 399 aa24.97■■□□□ 1.59
COMMD4-222ENST00000568034 JCADQ9P266 1359 aa24.96■■□□□ 1.59
COMMD4-222ENST00000568034 HDGFL2Q7Z4V5 671 aaPredicted RBP24.96■■□□□ 1.59
COMMD4-222ENST00000568034 COL22A1Q8NFW1 1626 aaPredicted RBP24.96■■□□□ 1.59
COMMD4-222ENST00000568034 EDC4Q6P2E9 1401 aaKnown RBP24.95■■□□□ 1.58
COMMD4-222ENST00000568034 TTC21BQ7Z4L5 1316 aa24.94■■□□□ 1.58
COMMD4-222ENST00000568034 PIK3C2AO00443 1686 aa24.94■■□□□ 1.58
COMMD4-222ENST00000568034 CARD14Q9BXL6 1004 aa24.93■■□□□ 1.58
COMMD4-222ENST00000568034 MED1Q15648 1581 aaPredicted RBP24.92■■□□□ 1.58
COMMD4-222ENST00000568034 ARHGEF10O15013 1369 aa24.92■■□□□ 1.58
COMMD4-222ENST00000568034 PAK3O75914 559 aaPredicted RBP24.91■■□□□ 1.58
COMMD4-222ENST00000568034 CRYBG1Q9Y4K1 1723 aa24.9■■□□□ 1.58
COMMD4-222ENST00000568034 TTC21AQ8NDW8 1320 aa24.89■■□□□ 1.58
COMMD4-222ENST00000568034 NSD3Q9BZ95 1437 aa24.89■■□□□ 1.58
COMMD4-222ENST00000568034 PANK3Q9H999 370 aa24.89■■□□□ 1.58
COMMD4-222ENST00000568034 MARF1Q9Y4F3 1742 aaKnown RBP24.89■■□□□ 1.57
COMMD4-222ENST00000568034 ABCA3Q99758 1704 aa24.88■■□□□ 1.57
COMMD4-222ENST00000568034 USP54Q70EL1 1684 aa24.87■■□□□ 1.57
COMMD4-222ENST00000568034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.86■■□□□ 1.57
COMMD4-222ENST00000568034 LMOD2Q6P5Q4 547 aa24.85■■□□□ 1.57
COMMD4-222ENST00000568034 LRP6O75581 1613 aa24.85■■□□□ 1.57
COMMD4-222ENST00000568034 USP31Q70CQ4 1352 aa24.84■■□□□ 1.57
COMMD4-222ENST00000568034 NME9Q86XW9 330 aa24.84■■□□□ 1.57
COMMD4-222ENST00000568034 ABTB2Q8N961 1025 aa24.84■■□□□ 1.57
COMMD4-222ENST00000568034 USP19O94966 1318 aa24.84■■□□□ 1.57
COMMD4-222ENST00000568034 SPATA31A6Q5VVP1 1343 aa24.84■■□□□ 1.57
COMMD4-222ENST00000568034 PHRF1Q9P1Y6 1649 aaKnown RBP24.83■■□□□ 1.57
COMMD4-222ENST00000568034 NUTM2GQ5VZR2 741 aa24.83■■□□□ 1.57
COMMD4-222ENST00000568034 ZRANB1Q9UGI0 708 aa24.83■■□□□ 1.57
COMMD4-222ENST00000568034 OVOS2A0A0J9YW53 1432 aa24.83■■□□□ 1.57
COMMD4-222ENST00000568034 OVOS2Q6IE36 1432 aa24.83■■□□□ 1.57
COMMD4-222ENST00000568034 SLIT3O75094 1523 aa24.82■■□□□ 1.56
COMMD4-222ENST00000568034 KIF20BQ96Q89 1820 aa24.82■■□□□ 1.56
COMMD4-222ENST00000568034 ZNF316A6NFI3 1004 aaPredicted RBP24.81■■□□□ 1.56
COMMD4-222ENST00000568034 CABLES1Q8TDN4 633 aa24.81■■□□□ 1.56
COMMD4-222ENST00000568034 PER1O15534 1290 aaPredicted RBP24.8■■□□□ 1.56
COMMD4-222ENST00000568034 FYB1O15117 783 aa24.79■■□□□ 1.56
COMMD4-222ENST00000568034 NLRP6P59044 892 aa24.79■■□□□ 1.56
COMMD4-222ENST00000568034 NLRP13Q86W25 1043 aa24.78■■□□□ 1.56
COMMD4-222ENST00000568034 PLEKHG5O94827 1062 aa24.76■■□□□ 1.55
COMMD4-222ENST00000568034 NUTM2BA6NNL0 878 aaPredicted RBP24.75■■□□□ 1.55
COMMD4-222ENST00000568034 NUTM2EB1AL46 878 aaPredicted RBP24.75■■□□□ 1.55
COMMD4-222ENST00000568034 NUTM2AQ8IVF1 878 aaPredicted RBP24.75■■□□□ 1.55
COMMD4-222ENST00000568034 GGNBP2Q9H3C7 697 aa24.75■■□□□ 1.55
COMMD4-222ENST00000568034 CGNL1Q0VF96 1302 aa24.75■■□□□ 1.55
COMMD4-222ENST00000568034 NFAT5O94916 1531 aa24.75■■□□□ 1.55
COMMD4-222ENST00000568034 AMER1Q5JTC6 1135 aaPredicted RBP24.74■■□□□ 1.55
COMMD4-222ENST00000568034 ILDR2Q71H61 639 aa24.74■■□□□ 1.55
COMMD4-222ENST00000568034 ANKRD26Q9UPS8 1709 aa24.73■■□□□ 1.55
COMMD4-222ENST00000568034 GCP02774 474 aa24.72■■□□□ 1.55
COMMD4-222ENST00000568034 KNSTRNQ9Y448 316 aa24.72■■□□□ 1.55
COMMD4-222ENST00000568034 NSD2O96028 1365 aa24.7■■□□□ 1.55
COMMD4-222ENST00000568034 DDX10Q13206 875 aaKnown RBP24.7■■□□□ 1.54
COMMD4-222ENST00000568034 COG3Q96JB2 828 aa24.7■■□□□ 1.54
COMMD4-222ENST00000568034 ADAMTS2O95450 1211 aa24.69■■□□□ 1.54
COMMD4-222ENST00000568034 NPC1L1Q9UHC9 1359 aa24.68■■□□□ 1.54
COMMD4-222ENST00000568034 CPDO75976 1380 aa24.67■■□□□ 1.54
COMMD4-222ENST00000568034 HAP1P54257 671 aaPredicted RBP24.67■■□□□ 1.54
COMMD4-222ENST00000568034 KIAA0232Q92628 1395 aa24.67■■□□□ 1.54
COMMD4-222ENST00000568034 KCNH5Q8NCM2 988 aa24.66■■□□□ 1.54
COMMD4-222ENST00000568034 SOX12O15370 315 aa24.64■■□□□ 1.54
COMMD4-222ENST00000568034 ZC3H6P61129 1189 aaKnown RBP24.64■■□□□ 1.54
COMMD4-222ENST00000568034 LMO7Q8WWI1 1683 aa24.63■■□□□ 1.53
COMMD4-222ENST00000568034 FBLN1P23142 703 aa24.63■■□□□ 1.53
COMMD4-222ENST00000568034 COL18A1P39060 1754 aa24.62■■□□□ 1.53
COMMD4-222ENST00000568034 COL14A1Q05707 1796 aaKnown RBP24.62■■□□□ 1.53
COMMD4-222ENST00000568034 SLIT2O94813 1529 aa24.62■■□□□ 1.53
COMMD4-222ENST00000568034 FAM83GA6ND36 823 aa24.62■■□□□ 1.53
COMMD4-222ENST00000568034 ARHGEF25Q86VW2 580 aa24.62■■□□□ 1.53
COMMD4-222ENST00000568034 PLCH1Q4KWH8 1693 aa24.62■■□□□ 1.53
COMMD4-222ENST00000568034 MEX3CQ5U5Q3 659 aaKnown RBP24.61■■□□□ 1.53
COMMD4-222ENST00000568034 C8orf37Q96NL8 207 aa24.61■■□□□ 1.53
COMMD4-222ENST00000568034 LTN1O94822 1766 aa24.6■■□□□ 1.53
COMMD4-222ENST00000568034 CC2D1BQ5T0F9 858 aaKnown RBP24.6■■□□□ 1.53
COMMD4-222ENST00000568034 PRDM11Q9NQV5 511 aa24.6■■□□□ 1.53
COMMD4-222ENST00000568034 AATKQ6ZMQ8 1374 aa24.59■■□□□ 1.53
COMMD4-222ENST00000568034 CHRNA2Q15822 529 aa24.59■■□□□ 1.53
COMMD4-222ENST00000568034 ABCC6O95255 1503 aa24.58■■□□□ 1.53
COMMD4-222ENST00000568034 FNBP4Q8N3X1 1017 aaPredicted RBP24.58■■□□□ 1.53
COMMD4-222ENST00000568034 MAP3K19Q56UN5 1328 aa24.58■■□□□ 1.52
COMMD4-222ENST00000568034 NRAPQ86VF7 1730 aa24.58■■□□□ 1.52
COMMD4-222ENST00000568034 NWD2Q9ULI1 1742 aa24.58■■□□□ 1.52
COMMD4-222ENST00000568034 MORC1Q86VD1 984 aa24.57■■□□□ 1.52
COMMD4-222ENST00000568034 PEAK1Q9H792 1746 aa24.57■■□□□ 1.52
COMMD4-222ENST00000568034 CAMTA1Q9Y6Y1 1673 aa24.56■■□□□ 1.52
COMMD4-222ENST00000568034 BCL9LQ86UU0 1499 aa24.56■■□□□ 1.52
COMMD4-222ENST00000568034 AFF2P51816 1311 aa24.56■■□□□ 1.52
COMMD4-222ENST00000568034 RRS1Q15050 365 aaKnown RBP24.55■■□□□ 1.52
COMMD4-222ENST00000568034 NGLY1Q96IV0 654 aa24.55■■□□□ 1.52
COMMD4-222ENST00000568034 RGS17Q9UGC6 210 aaPredicted RBP24.54■■□□□ 1.52
COMMD4-222ENST00000568034 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.54■■□□□ 1.52
COMMD4-222ENST00000568034 SMG6Q86US8 1419 aaKnown RBP24.53■■□□□ 1.52
COMMD4-222ENST00000568034 TNNT2P45379 298 aaPredicted RBP24.53■■□□□ 1.52
COMMD4-222ENST00000568034 AXIN2Q9Y2T1 843 aa24.53■■□□□ 1.52
COMMD4-222ENST00000568034 MAP2P11137 1827 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms