RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ACEP12821 1306 aa35.97■■■■□ 3.35
FANCA-228ENST00000567943 SRPK2P78362 688 aaKnown RBP35.95■■■■□ 3.35
FANCA-228ENST00000567943 RALGAPBQ86X10 1494 aa35.93■■■■□ 3.34
FANCA-228ENST00000567943 PLCH1Q4KWH8 1693 aa35.93■■■■□ 3.34
FANCA-228ENST00000567943 PPIP5K1Q6PFW1 1433 aa35.92■■■■□ 3.34
FANCA-228ENST00000567943 PAK3O75914 559 aaPredicted RBP35.92■■■■□ 3.34
FANCA-228ENST00000567943 HAP1P54257 671 aaPredicted RBP35.92■■■■□ 3.34
FANCA-228ENST00000567943 NWD2Q9ULI1 1742 aa35.88■■■■□ 3.34
FANCA-228ENST00000567943 UNC5CLQ8IV45 518 aa35.88■■■■□ 3.33
FANCA-228ENST00000567943 FAM83GA6ND36 823 aa35.87■■■■□ 3.33
FANCA-228ENST00000567943 EVC2Q86UK5 1308 aa35.85■■■■□ 3.33
FANCA-228ENST00000567943 CARD11Q9BXL7 1154 aa35.85■■■■□ 3.33
FANCA-228ENST00000567943 GLI3P10071 1580 aa35.84■■■■□ 3.33
FANCA-228ENST00000567943 GJD4Q96KN9 370 aaPredicted RBP35.83■■■■□ 3.33
FANCA-228ENST00000567943 CABP1Q9NZU7 370 aa35.83■■■■□ 3.33
FANCA-228ENST00000567943 PHRF1Q9P1Y6 1649 aaKnown RBP35.83■■■■□ 3.33
FANCA-228ENST00000567943 UPF1Q92900 1129 aaKnown RBP eCLIP35.81■■■■□ 3.32
FANCA-228ENST00000567943 NRAPQ86VF7 1730 aa35.8■■■■□ 3.32
FANCA-228ENST00000567943 COL14A1Q05707 1796 aaKnown RBP35.79■■■■□ 3.32
FANCA-228ENST00000567943 SBNO2Q9Y2G9 1366 aa35.79■■■■□ 3.32
FANCA-228ENST00000567943 NUTM2GQ5VZR2 741 aa35.79■■■■□ 3.32
FANCA-228ENST00000567943 EP400Q96L91 3159 aa35.78■■■■□ 3.32
FANCA-228ENST00000567943 CLSPNQ9HAW4 1339 aa35.77■■■■□ 3.32
FANCA-228ENST00000567943 USP6P35125 1406 aa35.74■■■■□ 3.31
FANCA-228ENST00000567943 VPS72Q15906 364 aa35.74■■■■□ 3.31
FANCA-228ENST00000567943 ABTB2Q8N961 1025 aa35.73■■■■□ 3.31
FANCA-228ENST00000567943 SSH2Q76I76 1423 aa35.73■■■■□ 3.31
FANCA-228ENST00000567943 AKAP12Q02952 1782 aa35.72■■■■□ 3.31
FANCA-228ENST00000567943 BTG4Q9NY30 223 aa35.71■■■■□ 3.31
FANCA-228ENST00000567943 NRKQ7Z2Y5 1582 aa35.71■■■■□ 3.31
FANCA-228ENST00000567943 BRD4O60885 1362 aaPredicted RBP35.69■■■■□ 3.3
FANCA-228ENST00000567943 KIAA0232Q92628 1395 aa35.69■■■■□ 3.3
FANCA-228ENST00000567943 USP19O94966 1318 aa35.69■■■■□ 3.3
FANCA-228ENST00000567943 CCER1Q8TC90 406 aaPredicted RBP35.68■■■■□ 3.3
FANCA-228ENST00000567943 BRWD3Q6RI45 1802 aa35.67■■■■□ 3.3
FANCA-228ENST00000567943 ATAD2Q6PL18 1390 aa35.66■■■■□ 3.3
FANCA-228ENST00000567943 PRDM11Q9NQV5 511 aa35.66■■■■□ 3.3
FANCA-228ENST00000567943 PIK3C2AO00443 1686 aa35.65■■■■□ 3.3
FANCA-228ENST00000567943 CPSF1Q10570 1443 aaKnown RBP35.65■■■■□ 3.3
FANCA-228ENST00000567943 ZC3H6P61129 1189 aaKnown RBP35.64■■■■□ 3.3
FANCA-228ENST00000567943 CHRNA2Q15822 529 aa35.63■■■■□ 3.29
FANCA-228ENST00000567943 TIMELESSQ9UNS1 1208 aa35.62■■■■□ 3.29
FANCA-228ENST00000567943 ONECUT3O60422 494 aaPredicted RBP35.61■■■■□ 3.29
FANCA-228ENST00000567943 NLRP13Q86W25 1043 aa35.61■■■■□ 3.29
FANCA-228ENST00000567943 TESK2Q96S53 571 aa35.61■■■■□ 3.29
FANCA-228ENST00000567943 CCDC9Q9Y3X0 531 aaKnown RBP35.6■■■■□ 3.29
FANCA-228ENST00000567943 ST20-MTHFSA0A0A6YYL1 179 aa35.59■■■■□ 3.29
FANCA-228ENST00000567943 MON2Q7Z3U7 1717 aa35.59■■■■□ 3.29
FANCA-228ENST00000567943 ZNF692Q9BU19 519 aaPredicted RBP35.58■■■■□ 3.29
FANCA-228ENST00000567943 CD163L1Q9NR16 1453 aa35.58■■■■□ 3.29
FANCA-228ENST00000567943 LMO7Q8WWI1 1683 aa35.57■■■■□ 3.28
FANCA-228ENST00000567943 CPDO75976 1380 aa35.57■■■■□ 3.28
FANCA-228ENST00000567943 GCP02774 474 aa35.57■■■■□ 3.28
FANCA-228ENST00000567943 SLIT3O75094 1523 aa35.57■■■■□ 3.28
FANCA-228ENST00000567943 TTC21BQ7Z4L5 1316 aa35.57■■■■□ 3.28
FANCA-228ENST00000567943 SEPT12Q8IYM1 358 aa35.56■■■■□ 3.28
FANCA-228ENST00000567943 NLRP6P59044 892 aa35.55■■■■□ 3.28
FANCA-228ENST00000567943 CAMTA1Q9Y6Y1 1673 aa35.55■■■■□ 3.28
FANCA-228ENST00000567943 SPATA31A5Q5VU36 1347 aa35.55■■■■□ 3.28
FANCA-228ENST00000567943 SPATA31A7Q8IWB4 1347 aa35.55■■■■□ 3.28
FANCA-228ENST00000567943 KTN1Q86UP2 1357 aaKnown RBP35.52■■■■□ 3.28
FANCA-228ENST00000567943 FAM98CQ17RN3 349 aaKnown RBP35.5■■■■□ 3.27
FANCA-228ENST00000567943 SLC12A5Q9H2X9 1139 aa35.5■■■■□ 3.27
FANCA-228ENST00000567943 PUS7Q96PZ0 661 aaKnown RBP35.49■■■■□ 3.27
FANCA-228ENST00000567943 TTC21AQ8NDW8 1320 aa35.48■■■■□ 3.27
FANCA-228ENST00000567943 USP47Q96K76 1375 aa35.48■■■■□ 3.27
FANCA-228ENST00000567943 STRN4Q9NRL3 753 aa35.47■■■■□ 3.27
FANCA-228ENST00000567943 THSD7AQ9UPZ6 1657 aa35.46■■■■□ 3.27
FANCA-228ENST00000567943 TMC1Q8TDI8 760 aa35.46■■■■□ 3.27
FANCA-228ENST00000567943 SPATA31A1Q5TZJ5 1347 aa35.46■■■■□ 3.27
FANCA-228ENST00000567943 COL18A1P39060 1754 aa35.45■■■■□ 3.27
FANCA-228ENST00000567943 A0A1W2PP64 1363 aa35.41■■■■□ 3.26
FANCA-228ENST00000567943 USP54Q70EL1 1684 aa35.41■■■■□ 3.26
FANCA-228ENST00000567943 KRT27Q7Z3Y8 459 aa35.41■■■■□ 3.26
FANCA-228ENST00000567943 ZRANB1Q9UGI0 708 aa35.41■■■■□ 3.26
FANCA-228ENST00000567943 COL5A2P05997 1499 aaPredicted RBP35.41■■■■□ 3.26
FANCA-228ENST00000567943 LARP1Q6PKG0 1096 aaKnown RBP35.4■■■■□ 3.26
FANCA-228ENST00000567943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.39■■■■□ 3.26
FANCA-228ENST00000567943 AATKQ6ZMQ8 1374 aa35.38■■■■□ 3.26
FANCA-228ENST00000567943 NFAT5O94916 1531 aa35.38■■■■□ 3.25
FANCA-228ENST00000567943 EVA1CP58658 441 aa35.38■■■■□ 3.25
FANCA-228ENST00000567943 A0A0G2JS52 829 aa35.37■■■■□ 3.25
FANCA-228ENST00000567943 MYT1Q01538 1121 aa35.37■■■■□ 3.25
FANCA-228ENST00000567943 HDGFL2Q7Z4V5 671 aaPredicted RBP35.36■■■■□ 3.25
FANCA-228ENST00000567943 NME9Q86XW9 330 aa35.36■■■■□ 3.25
FANCA-228ENST00000567943 USP31Q70CQ4 1352 aa35.36■■■■□ 3.25
FANCA-228ENST00000567943 RGPD5Q99666 1765 aa35.36■■■■□ 3.25
FANCA-228ENST00000567943 EDC4Q6P2E9 1401 aaKnown RBP35.35■■■■□ 3.25
FANCA-228ENST00000567943 ZBTB7CA1YPR0 619 aa35.35■■■■□ 3.25
FANCA-228ENST00000567943 SLC24A1O60721 1099 aa35.35■■■■□ 3.25
FANCA-228ENST00000567943 ARHGEF25Q86VW2 580 aa35.35■■■■□ 3.25
FANCA-228ENST00000567943 TERF2IPQ9NYB0 399 aa35.34■■■■□ 3.25
FANCA-228ENST00000567943 USP35Q9P2H5 1018 aa35.34■■■■□ 3.25
FANCA-228ENST00000567943 CCDC125Q86Z20 511 aa35.33■■■■□ 3.25
FANCA-228ENST00000567943 AXIN2Q9Y2T1 843 aa35.33■■■■□ 3.25
FANCA-228ENST00000567943 NINLQ9Y2I6 1382 aa35.33■■■■□ 3.25
FANCA-228ENST00000567943 SOX12O15370 315 aa35.32■■■■□ 3.24
FANCA-228ENST00000567943 KCNH5Q8NCM2 988 aa35.32■■■■□ 3.24
FANCA-228ENST00000567943 BARGINQ6ZT62 677 aa35.3■■■■□ 3.24
FANCA-228ENST00000567943 BLMP54132 1417 aaPredicted RBP35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms